Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 UTP15 Gene 0 41.11 34.49 24.18 23.61 35.32 26.48 30.62 20.80 13.76 27.22 94.44 104.37 67.53 78.18 64.92 79.25 82.54 22.96 27.49 32.94 20.03 45.55 32.34 2 296792 Transcript 0 47.74 36.60 22.53 25.95 35.66 33.42 36.26 20.77 16.01 29.99 141.55 142.87 92.21 109.00 88.67 112.35 128.72 27.89 33.03 42.74 31.02 49.71 41.42 3 ER1a ExonRegion 1 6.15 26.26 4.64 4.49 23.61 29.10 23.38 6.28 3.43 15.45 92.22 9.21 18.11 57.60 29.47 174.66 84.05 50.08 31.59 35.23 26.99 32.37 84.57 4 E1a_E2a KnownJunction 1 0.00 0.00 1.27 5.49 7.81 2.16 2.25 6.49 1.16 22.97 103.92 18.91 6.17 7.18 18.05 20.93 59.56 18.24 8.00 18.34 26.38 11.21 12.04 5 I1 Intron 0 1.62 2.14 1.40 3.20 1.92 3.77 2.72 2.95 2.46 2.77 16.98 14.57 15.84 11.50 2.71 17.46 16.87 7.59 4.41 10.57 4.31 10.05 9.12 6 I1_AR1 ActiveIntronRegion 0 0.00 1.54 1.72 1.92 1.01 3.12 2.25 1.95 1.04 1.94 18.25 0.00 10.11 12.51 1.68 31.44 21.20 19.26 9.03 15.67 6.66 7.48 21.63 7 I1_SR1 SilentIntronRegion 0 2.18 2.35 1.29 3.66 2.24 4.01 2.90 3.31 2.96 3.08 16.66 19.62 17.88 11.22 3.07 12.81 15.50 3.67 2.87 8.89 3.54 10.99 4.91 8 ER2a ExonRegion 1 8.72 11.17 8.96 11.83 16.22 23.65 18.54 10.04 10.98 28.90 157.67 55.01 33.56 86.28 51.37 154.60 123.77 24.78 26.16 37.03 18.25 50.33 61.64 9 E2a_E3a KnownJunction 1 13.26 14.67 6.00 3.40 33.70 36.46 39.08 3.82 6.13 12.76 104.18 87.03 12.82 62.51 31.15 64.94 91.16 5.72 12.71 23.97 11.24 27.00 32.01 10 I2 Intron 0 4.43 2.84 2.23 3.54 2.57 2.08 4.85 2.02 3.21 4.47 10.95 27.66 17.85 10.89 2.56 7.77 6.91 3.22 2.78 7.60 1.15 13.63 4.86 11 I2_AR1 ActiveIntronRegion 0 2.68 3.29 2.30 3.00 1.69 2.69 7.43 0.54 3.74 4.39 11.64 23.19 19.85 10.89 3.52 7.17 9.04 5.47 3.30 6.63 0.93 11.77 5.41 12 I2_SR1 SilentIntronRegion 0 0.00 1.44 0.10 0.00 0.00 0.15 0.99 0.00 1.44 2.92 1.77 16.78 16.22 5.89 0.00 3.47 0.00 1.77 0.53 0.98 0.00 9.81 1.59 13 I2_AR2 ActiveIntronRegion 0 6.23 2.66 2.39 4.32 3.50 1.77 3.25 3.36 3.01 4.75 11.34 32.53 16.79 11.50 2.06 8.73 5.90 1.66 2.60 9.04 1.44 15.65 4.80 14 E3_Aa NovelBoundary 0 6.89 0.00 0.00 10.59 0.00 16.64 1.90 8.30 3.21 2.71 13.11 25.81 19.80 13.89 0.00 4.27 29.08 0.00 0.00 2.56 3.15 14.27 8.71 15 ER3a ExonRegion 0 24.53 30.22 9.01 20.49 33.69 34.55 25.60 12.75 15.95 26.39 130.25 109.45 71.46 97.99 46.01 63.47 109.64 22.15 12.16 34.32 14.45 57.44 31.17 16 E3a_E4a KnownJunction 0 24.52 44.60 20.70 26.17 12.56 41.40 28.97 20.21 14.70 24.87 152.35 112.69 47.24 129.38 87.27 63.57 105.00 27.82 8.85 59.32 27.68 47.88 30.56 17 I3 Intron 0 0.00 0.00 0.00 0.00 0.00 2.03 3.67 1.43 0.00 0.00 3.21 18.64 2.14 3.76 2.27 4.94 3.66 0.00 0.00 1.18 0.00 10.39 0.00 18 I3_SR1 SilentIntronRegion 0 0.00 0.00 0.00 0.00 0.00 2.08 3.75 1.46 0.00 0.00 3.29 19.00 2.19 3.84 2.29 5.05 3.74 0.00 0.00 1.21 0.00 10.63 0.00 19 E4_Aa NovelBoundary 0 7.56 6.45 6.89 4.86 11.12 0.00 0.00 1.68 1.33 4.59 7.69 6.30 26.13 9.54 0.00 12.90 13.37 0.00 13.46 3.20 0.00 8.88 0.00 20 ER4a ExonRegion 0 27.96 27.93 17.05 16.93 23.16 30.41 17.03 12.98 16.09 24.26 120.21 116.03 73.54 131.37 69.02 81.20 117.44 23.74 21.42 33.19 39.30 52.13 32.05 21 E4_Da NovelBoundary 0 3.48 12.83 1.83 0.00 0.00 0.00 0.00 2.26 0.00 1.07 14.42 18.01 13.31 2.41 4.45 19.91 29.45 4.44 8.75 6.01 2.35 12.00 0.00 22 E4a_E5a KnownJunction 0 32.30 3.09 17.36 21.48 23.17 33.05 38.51 16.72 18.61 16.44 135.35 105.63 117.20 130.03 62.67 110.40 152.13 31.92 17.88 27.87 53.56 64.60 43.54 23 ER5a ExonRegion 0 38.23 38.93 21.21 22.29 34.96 32.40 28.56 22.76 16.88 31.56 155.70 151.22 78.45 147.94 97.57 108.62 127.89 29.74 28.47 38.33 35.89 58.25 43.93 24 E5a_E6a KnownJunction 0 55.42 58.87 30.96 21.64 30.81 19.53 41.51 32.16 17.79 37.20 134.61 111.94 53.08 113.19 81.96 87.93 170.45 21.39 40.85 51.20 36.88 43.41 68.63 25 ER6a ExonRegion 0 54.78 54.81 24.07 20.21 23.74 20.46 27.29 22.55 14.04 30.88 158.41 161.15 99.61 123.38 88.30 111.10 145.32 38.55 33.80 39.51 45.39 50.96 58.34 26 E6a_E7a KnownJunction 0 49.93 75.18 39.56 30.03 15.96 36.00 57.28 27.31 7.78 35.70 136.25 193.86 116.88 131.67 129.80 151.50 167.46 40.13 31.62 51.13 56.71 38.39 40.21 27 ER7a ExonRegion 0 58.73 39.76 26.75 36.70 43.44 34.80 42.84 25.04 19.49 35.04 168.55 165.38 120.80 135.77 109.99 145.35 156.91 29.66 42.60 53.88 40.25 53.13 55.62 28 E7a_E8a KnownJunction 0 51.71 34.86 13.84 32.43 55.52 44.63 27.95 27.56 19.07 29.41 130.09 198.51 118.50 111.90 90.86 139.54 149.23 38.97 30.40 53.95 17.05 52.54 59.33 29 ER8a ExonRegion 0 55.95 42.82 26.47 35.07 22.35 26.45 27.41 22.75 20.55 27.34 182.56 183.37 136.18 122.90 117.96 143.68 121.05 31.65 37.92 58.52 28.10 62.06 54.24 30 E8a_E9a KnownJunction 0 73.20 73.67 21.11 38.66 28.10 29.93 22.48 28.46 20.20 26.32 210.21 172.71 152.59 127.02 110.88 157.05 151.19 12.93 25.04 53.31 41.70 49.97 38.67 31 ER9a ExonRegion 0 50.77 48.91 27.54 41.17 37.75 25.89 46.17 25.77 18.60 28.57 206.59 196.15 118.60 120.62 106.90 123.42 180.43 27.52 33.06 48.85 30.79 62.30 35.34 32 E9_Da NovelBoundary 1 5.93 3.29 9.11 9.56 4.16 5.00 8.74 13.27 8.22 6.07 9.69 6.30 51.46 9.36 4.45 14.18 4.77 4.64 4.80 6.52 0.00 19.84 10.84 33 E9a_E10a KnownJunction 0 85.64 38.61 20.58 29.10 69.35 81.03 61.08 29.78 12.70 28.63 191.47 225.67 188.95 142.39 146.24 158.59 227.77 45.10 17.04 47.55 27.99 39.99 32.01 34 I9 Intron 0 7.20 5.24 3.01 2.30 4.14 4.35 5.18 3.45 1.52 3.70 7.77 18.52 11.57 5.30 3.34 2.45 3.74 0.57 1.31 3.73 1.36 11.60 4.24 35 I9_AR1 ActiveIntronRegion 0 6.05 6.78 3.05 4.36 4.46 7.43 6.31 5.52 3.07 3.67 11.52 22.52 9.07 7.19 6.26 4.96 3.93 0.88 1.52 3.55 2.10 10.92 7.00 36 I9_SR1 SilentIntronRegion 0 8.14 4.09 3.00 0.74 3.91 2.01 4.36 1.88 0.34 3.75 4.94 15.60 13.57 3.88 1.12 0.54 3.62 0.34 1.16 3.89 0.81 12.19 2.15 37 ER10a ExonRegion 0 78.79 35.35 26.73 31.47 53.38 39.16 37.63 26.98 15.23 40.92 160.81 205.52 146.68 122.32 120.63 140.36 178.22 32.53 56.87 44.66 39.45 57.48 38.15 38 E10_Da NovelBoundary 0 39.27 21.58 8.75 11.32 0.00 10.79 4.24 11.38 7.84 12.17 11.79 28.96 6.82 0.00 10.75 14.70 7.67 0.00 0.00 8.25 4.76 24.19 4.35 39 E10a_E11a KnownJunction 0 87.79 53.41 24.22 42.32 81.15 18.68 35.55 19.76 20.63 29.41 145.56 181.26 104.21 104.89 86.66 93.57 138.20 26.99 55.44 53.37 40.83 53.89 19.21 40 E11_Aa NovelBoundary 0 26.00 19.27 7.63 3.50 28.27 5.68 6.76 1.93 3.18 4.22 14.64 13.20 6.82 4.77 4.45 16.75 18.05 0.00 0.00 3.26 0.00 8.14 0.00 41 ER11a ExonRegion 0 67.62 32.80 27.78 30.32 37.58 30.34 33.30 29.00 24.20 38.52 133.64 203.26 125.02 118.31 108.21 121.26 134.84 34.13 50.16 45.17 36.15 51.48 30.16 42 E11_Da NovelBoundary 0 13.78 12.96 8.81 0.00 24.53 0.00 0.00 2.55 1.77 1.67 12.85 25.21 0.00 2.35 4.45 3.50 9.44 1.74 4.80 3.26 0.00 8.45 3.24 43 E11a_E12a KnownJunction 0 75.72 27.17 41.87 40.95 36.16 52.24 76.00 20.95 20.08 42.60 115.13 194.31 112.49 109.90 142.78 155.69 115.75 20.40 67.01 48.51 26.26 53.40 44.56 44 E12_Aa NovelBoundary 0 14.22 5.39 19.60 6.66 12.82 0.00 3.71 5.59 1.62 3.06 9.48 25.21 0.00 0.00 0.00 3.67 0.00 0.00 4.24 6.26 3.15 5.69 0.00 45 ER12a ExonRegion 0 56.97 34.43 40.00 35.09 40.73 39.50 56.62 20.27 22.94 46.07 134.19 176.11 104.13 120.49 118.61 113.90 88.84 23.49 55.82 44.43 21.89 64.02 39.62 46 E12a_E13a KnownJunction 0 73.57 32.95 38.41 27.57 68.25 49.63 60.41 26.82 30.76 44.40 125.93 157.55 96.91 119.84 114.59 78.36 76.39 22.84 58.45 40.72 21.50 68.77 29.45 47 ER13a ExonRegion 0 41.33 34.56 27.19 23.36 38.31 23.92 30.94 22.04 12.18 25.13 52.92 79.80 51.95 50.14 49.83 45.03 45.30 16.87 22.54 26.24 10.82 39.75 20.48 48 IG43_AR1 ActiveIntergenicRegion 0 15.84 11.61 13.67 14.14 15.39 7.30 14.26 7.80 5.33 9.97 8.70 18.74 11.83 13.41 21.66 14.14 9.42 4.62 11.44 10.74 2.19 10.01 3.56