Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ANKRA2 Gene 0 80.75 86.04 46.65 88.90 80.82 67.51 45.82 63.26 92.37 63.13 50.53 102.12 83.75 58.98 62.95 51.95 50.50 32.75 35.41 46.56 47.01 75.78 40.06 2 296785 Transcript 0 116.34 103.48 46.56 105.68 92.21 80.02 59.45 67.41 107.91 61.46 60.35 126.64 96.45 67.79 83.13 62.18 60.83 31.90 39.98 54.24 54.15 80.21 45.80 3 ER1a ExonRegion 0 17.02 29.70 13.12 20.85 14.98 29.37 11.61 10.63 28.22 27.24 31.25 16.74 13.09 41.91 26.25 35.21 35.23 34.20 20.63 28.96 53.89 27.03 33.42 4 E1a_E2a KnownJunction 0 87.20 83.60 34.00 51.21 26.91 37.48 34.14 25.38 87.50 55.63 53.91 81.33 51.13 79.82 58.59 84.93 71.81 65.58 4.61 56.69 73.21 51.56 73.50 5 ER2a ExonRegion 0 50.54 74.13 53.23 97.18 78.37 80.17 48.03 70.52 136.30 79.45 72.92 112.75 96.95 84.78 58.72 81.15 84.59 59.64 54.39 72.07 61.21 95.84 51.37 6 E2_Da NovelBoundary 1 3.11 12.30 19.57 17.88 43.46 26.80 34.31 2.01 42.07 21.14 4.37 61.52 26.13 11.60 4.45 22.90 30.11 11.94 4.80 23.33 0.00 19.84 15.96 7 E2a_E3a KnownJunction 0 34.60 54.92 55.88 104.38 85.74 68.54 38.33 74.71 134.29 73.20 28.85 128.29 97.56 63.45 44.50 39.82 49.28 26.86 47.53 42.06 14.33 65.09 40.89 8 I2 Intron 0 9.91 6.80 9.64 13.13 8.35 8.18 6.00 8.04 12.04 6.99 7.62 35.77 34.25 11.82 7.02 12.59 8.34 5.40 4.97 9.02 2.95 18.90 9.82 9 I2_AR1 ActiveIntronRegion 0 7.88 8.68 10.84 6.04 10.93 9.87 6.87 6.71 12.63 6.67 5.02 43.94 35.43 10.88 8.10 8.85 6.14 3.76 2.96 7.52 1.64 12.80 11.45 10 I2_SR1 SilentIntronRegion 0 8.84 5.24 10.39 18.75 5.88 7.42 4.84 7.33 9.96 5.70 7.83 32.21 27.53 11.69 6.22 16.74 8.93 5.97 6.04 9.82 2.90 24.19 9.68 11 I2_AR2 ActiveIntronRegion 0 21.54 6.97 2.67 14.57 9.97 5.64 7.98 15.73 18.88 13.58 15.83 23.32 58.80 15.84 6.75 8.62 13.66 8.80 7.57 11.04 7.71 18.41 5.10 12 E3_Aa NovelBoundary 1 38.08 33.48 22.74 54.11 38.37 35.43 18.42 27.72 31.68 21.01 29.43 48.32 127.91 19.90 17.80 51.27 44.51 17.04 14.31 17.64 0.00 29.02 43.62 13 ER3a ExonRegion 0 86.91 135.33 64.41 144.77 158.98 106.44 83.41 89.01 147.72 89.92 96.45 190.82 175.24 92.74 90.80 103.91 90.95 55.13 81.40 74.01 80.87 122.80 82.26 14 E3_Da NovelBoundary 0 3.78 14.60 14.04 14.05 11.63 20.73 10.16 6.57 10.85 14.21 2.68 38.26 34.41 7.42 4.45 7.43 15.52 2.57 0.00 14.57 2.59 7.65 7.68 15 E3a_E4a KnownJunction 1 91.13 117.94 55.56 142.04 101.78 59.00 68.76 64.36 124.74 84.83 75.02 220.27 113.79 86.06 66.75 123.56 45.72 50.08 58.26 62.57 92.67 82.60 46.10 16 I3_SR1 SilentIntronRegion 0 1.19 3.42 13.25 4.54 4.50 3.08 4.45 2.89 3.09 1.92 8.67 14.42 12.99 3.00 11.00 1.67 3.70 3.61 3.57 10.73 3.71 16.35 6.58 17 I3_AR1 ActiveIntronRegion 0 5.07 26.05 7.47 7.35 6.45 1.38 4.78 4.21 5.15 7.47 1.28 14.13 15.02 3.15 6.63 0.78 1.20 1.48 0.90 5.21 1.40 12.16 3.28 18 ER4a ExonRegion 0 78.98 110.03 46.66 117.85 70.50 78.52 49.63 53.63 112.51 63.39 78.46 121.49 119.38 88.05 79.30 87.72 74.87 32.59 57.63 41.39 89.75 59.51 73.19 19 E4_Da NovelBoundary 0 15.85 14.67 7.84 52.91 36.84 31.63 19.74 29.61 29.48 33.50 9.69 55.67 29.22 21.90 4.45 27.94 16.92 11.61 0.00 18.60 12.48 12.86 14.17 20 E4a_E5a KnownJunction 0 88.02 64.92 28.38 99.35 53.23 96.31 44.91 49.41 102.43 47.68 68.18 122.29 84.25 75.99 55.75 35.12 88.55 23.01 50.64 34.45 62.09 75.56 50.11 21 I4 Intron 0 35.11 38.19 10.71 35.53 40.17 24.47 30.68 22.10 26.94 19.87 8.20 54.65 63.99 19.11 9.08 9.91 8.02 10.40 6.07 15.41 9.24 22.54 9.94 22 I4_AR1 ActiveIntronRegion 1 36.48 29.83 6.70 24.54 49.09 24.22 31.09 18.89 13.51 13.80 4.26 35.13 53.72 12.99 6.45 7.63 7.27 6.77 8.18 7.03 4.04 20.64 4.31 23 I4_SR1 SilentIntronRegion 0 3.34 15.60 2.88 15.15 13.88 5.38 8.70 8.14 16.62 11.95 5.23 48.14 42.96 11.40 6.47 3.35 6.70 3.54 1.44 12.96 3.98 15.05 3.31 24 I4_AR2 ActiveIntronRegion 1 36.12 40.25 14.29 48.37 45.90 34.79 36.84 28.61 37.51 23.26 7.78 60.24 78.17 21.94 9.98 11.63 10.05 11.24 7.86 19.03 9.55 28.81 11.49 25 I4_SR2 SilentIntronRegion 0 59.56 58.36 13.69 38.15 48.84 24.43 39.32 25.28 25.96 24.43 13.45 61.79 64.97 24.38 11.26 13.92 6.40 16.72 6.09 16.19 15.87 20.09 15.97 26 E5_Aa NovelBoundary 1 137.28 118.01 28.36 91.20 72.33 50.65 87.31 38.16 50.72 40.75 16.74 83.58 93.18 17.13 15.20 7.09 17.58 19.69 13.84 15.02 14.27 34.60 7.60 27 ER5a ExonRegion 0 162.65 109.77 49.56 98.03 92.04 112.87 62.87 54.22 98.15 50.05 71.34 141.99 138.74 81.19 86.15 71.60 67.37 28.13 52.17 58.94 80.98 88.15 47.05 28 E5_Da NovelBoundary 1 95.72 69.53 35.78 92.13 96.77 32.03 41.51 55.08 19.24 55.77 12.90 155.15 135.38 30.02 37.83 16.24 13.93 18.90 13.46 17.19 16.43 36.68 26.80 29 E5a_E6a KnownJunction 0 62.83 67.29 21.52 65.93 53.14 79.50 19.48 31.91 82.46 33.50 33.85 94.08 53.24 50.86 80.10 35.46 69.28 20.98 16.09 52.99 49.98 43.78 23.47 30 I5 Intron 0 104.51 62.46 18.62 47.47 84.53 39.47 53.35 30.11 34.12 29.12 21.88 61.88 65.96 40.99 31.84 23.29 16.42 13.62 15.05 16.41 22.20 31.10 14.98 31 I5_SR1 SilentIntronRegion 0 88.77 70.65 20.64 58.43 84.72 40.35 54.43 36.53 39.38 32.32 20.26 72.87 71.50 41.10 30.50 28.10 14.93 16.65 15.71 15.76 25.37 32.99 13.89 32 I5_AR4 ActiveIntronRegion 0 69.91 23.13 5.82 9.71 72.83 33.93 36.74 12.64 13.35 13.98 17.64 51.01 43.09 23.14 19.04 16.90 18.05 4.56 12.34 8.38 28.37 19.27 8.63 33 I5_AR5 ActiveIntronRegion 0 156.27 47.79 13.27 21.35 136.46 63.88 75.47 22.76 21.00 20.64 30.93 112.57 100.05 68.21 63.83 32.69 36.31 9.85 28.67 12.77 44.07 35.42 20.56 34 I5_AR6 ActiveIntronRegion 0 144.52 58.02 18.50 37.41 85.13 38.16 54.93 22.47 30.22 27.57 26.11 39.76 59.37 44.46 36.58 14.79 18.02 10.24 13.75 20.43 12.91 30.58 18.79 35 E6_Aa NovelBoundary 0 161.29 128.79 42.31 75.98 79.46 21.18 54.23 50.03 54.66 27.21 26.27 24.76 91.55 53.68 75.41 30.85 17.86 21.93 32.85 37.58 23.23 37.23 19.21 36 ER6a ExonRegion 0 153.85 109.33 50.29 109.65 102.15 95.08 75.19 79.19 116.47 56.81 62.93 117.58 97.37 85.21 96.57 64.87 63.14 37.26 41.76 57.78 56.53 80.25 48.78 37 E6_Da NovelBoundary 0 30.75 9.87 14.43 24.24 22.92 2.67 6.71 18.85 12.50 13.19 7.26 0.00 6.82 4.53 8.90 3.16 0.00 0.00 3.86 23.27 0.00 25.29 6.91 38 E6a_E7a KnownJunction 0 189.44 117.54 61.47 139.98 136.16 68.54 86.25 79.40 129.11 64.01 61.33 133.09 109.57 69.81 119.91 91.77 84.53 34.45 54.50 80.41 47.07 124.43 62.49 39 E7_Aa NovelBoundary 0 20.23 20.98 8.96 51.54 33.70 4.77 8.13 11.83 21.15 13.89 6.90 7.65 20.78 7.18 5.19 3.25 8.32 1.58 12.14 12.53 8.46 26.21 8.28 40 ER7a ExonRegion 0 164.55 130.51 46.22 116.29 95.25 98.12 65.41 82.14 112.08 61.16 69.79 149.14 104.09 66.69 106.74 76.21 67.35 27.00 37.37 71.32 39.04 89.00 52.33 41 E7_Da NovelBoundary 0 33.71 24.27 57.45 90.90 34.72 25.67 24.33 29.12 37.21 32.48 12.00 37.21 33.11 33.26 33.62 44.09 9.54 6.18 13.46 17.71 2.35 25.84 22.62 42 E7a_E8a KnownJunction 1 211.59 143.59 43.40 120.36 69.61 100.00 75.52 93.20 105.84 57.94 81.18 117.94 80.68 54.04 168.00 39.56 36.00 14.47 26.73 51.65 43.61 99.99 30.47 43 I7_SR1 SilentIntronRegion 0 1.50 0.00 0.00 0.00 1.90 3.90 4.69 0.00 0.00 0.00 4.11 15.33 21.89 7.58 12.21 2.11 4.68 0.00 9.03 0.00 0.00 4.40 0.00 44 E8_Aa NovelBoundary 0 66.31 34.66 72.56 124.49 45.25 23.57 34.62 25.47 38.60 41.50 14.79 12.60 59.25 13.66 23.73 7.01 8.88 1.95 3.76 14.70 2.72 46.29 11.35 45 ER8a ExonRegion 0 159.05 128.14 50.09 130.32 122.42 100.18 75.79 98.99 120.58 60.46 69.63 123.79 108.16 61.36 107.02 33.90 52.53 16.15 22.69 51.90 27.78 79.53 26.03 46 E8_Da NovelBoundary 0 50.60 30.92 41.22 93.13 15.37 8.12 11.13 21.40 32.06 20.04 5.32 31.36 6.82 14.54 5.44 0.00 3.74 9.70 9.41 6.52 3.09 45.74 0.00 47 E8a_E9a KnownJunction 1 225.37 167.54 47.28 120.30 191.17 89.21 120.08 91.76 101.68 53.80 46.85 146.00 99.67 39.03 98.28 32.47 36.37 9.95 36.42 55.80 39.54 83.64 18.69 48 I8 Intron 0 35.13 37.51 35.70 57.88 31.34 23.51 22.47 22.10 18.84 17.50 5.53 20.67 21.17 11.52 11.58 7.13 4.87 4.08 5.29 12.17 2.03 21.14 3.52 49 I8_SR1 SilentIntronRegion 0 37.65 28.59 37.04 65.22 35.31 25.37 24.33 17.41 22.41 17.28 3.97 20.89 23.71 14.08 12.17 7.67 6.52 5.95 4.26 12.06 1.76 20.70 4.68 50 I8_AR1 ActiveIntronRegion 0 33.18 45.48 34.77 51.88 28.12 22.05 21.00 26.32 15.87 17.80 6.91 20.62 19.11 9.36 11.14 6.70 3.47 2.49 6.22 12.34 2.29 21.66 2.54 51 E9_Aa NovelBoundary 0 42.01 92.22 50.44 59.30 65.96 37.42 32.64 31.26 25.84 20.95 7.21 18.16 36.52 7.06 13.35 0.00 0.00 1.58 8.94 17.96 0.00 12.19 3.59 52 ER9a ExonRegion 1 114.11 114.92 70.36 118.06 115.06 61.01 51.23 97.47 94.29 85.77 23.98 135.26 96.74 31.51 69.77 19.86 16.54 6.90 16.80 29.09 8.09 94.83 18.44