Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RNF180 Gene 0 3.52 4.72 9.62 4.43 4.63 15.48 2.01 2.81 17.70 1.37 0.22 0.93 41.45 3.45 6.25 5.77 74.04 0.23 0.49 1.08 1.49 7.53 5.45 2 296615 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 381081 Transcript 0 3.94 1.51 0.00 0.19 1.74 1.71 3.82 0.24 1.44 0.48 2.16 2.89 7.53 4.61 7.04 5.61 16.84 1.21 4.74 4.36 1.85 2.71 3.71 4 389100 Transcript 0 3.64 4.25 13.24 3.77 5.80 28.42 3.35 3.31 20.53 1.96 0.00 0.04 76.10 5.06 12.08 5.84 146.95 0.00 0.00 0.28 0.74 9.69 8.82 5 IG8_AR3 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.61 0.00 0.74 0.47 16.41 0.00 0.00 0.00 0.00 0.00 0.00 6 IG8_SR3 SilentIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 0.84 0.00 0.00 0.84 0.00 0.00 0.00 5.28 0.00 0.00 2.71 16.15 0.00 0.00 0.00 0.00 0.00 0.00 7 ER1a ExonRegion 0 0.98 0.00 0.28 0.83 0.00 10.45 1.19 0.00 1.45 0.00 0.00 0.00 11.17 2.29 3.22 2.54 23.35 0.00 0.00 0.00 2.04 1.93 6.06 8 E1a_E2a KnownJunction 0 0.00 0.00 1.42 3.33 0.00 7.21 0.00 0.00 6.60 0.00 0.00 0.00 19.64 7.71 4.45 8.46 34.97 0.00 0.00 0.00 0.00 0.00 13.06 9 ER2a ExonRegion 0 1.49 1.31 6.83 1.85 0.52 7.24 0.53 0.97 14.62 0.65 0.00 0.00 54.13 5.06 4.81 9.62 147.78 0.00 0.00 0.80 1.68 4.72 11.33 10 E2a_E3a KnownJunction 0 9.93 3.22 11.29 1.76 4.33 7.27 0.00 0.00 16.96 0.00 0.00 0.00 100.64 7.36 9.64 11.79 167.55 0.00 0.00 0.00 0.00 8.08 4.35 11 ER3a ExonRegion 0 3.53 2.48 9.84 2.14 3.51 31.65 0.65 1.37 24.86 0.44 0.00 0.05 87.25 8.53 7.83 15.85 194.27 0.00 0.00 1.66 2.71 9.85 11.65 12 E3a_E4a KnownJunction 0 0.00 0.00 10.88 3.80 0.00 26.80 4.37 0.00 34.06 1.67 0.00 0.00 94.15 7.89 0.00 7.60 213.84 0.00 0.00 3.26 5.68 0.00 8.19 13 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER4a ExonRegion 0 3.70 4.86 13.39 2.43 3.88 15.43 1.83 2.55 25.81 1.55 0.00 2.65 86.96 7.34 9.83 16.57 230.71 0.59 0.00 1.87 5.11 13.46 12.22 15 E4a_E5a KnownJunction 0 0.00 12.89 6.36 1.50 8.23 18.74 0.00 6.53 29.83 5.00 0.00 0.00 41.23 2.12 0.00 7.86 195.42 0.00 0.00 0.00 0.00 3.12 20.57 16 ER5a ExonRegion 0 0.41 5.71 6.84 1.89 4.46 15.89 2.43 3.99 31.32 3.28 0.00 0.00 69.18 3.20 12.57 4.21 164.68 0.00 0.00 0.00 0.00 6.25 16.15 17 E5_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 4.48 0.00 0.00 0.00 6.33 2.12 0.00 0.00 21.88 0.00 0.00 0.00 0.00 0.00 0.00 18 E5a_E6a KnownJunction 0 0.00 0.00 8.49 2.06 7.30 23.68 4.33 0.00 21.67 0.00 0.00 0.00 82.46 4.36 20.40 7.09 168.86 0.00 0.00 0.00 0.00 10.96 8.02 19 ER5b ExonRegion 0 0.00 0.89 0.79 0.00 0.00 0.00 0.00 0.21 2.48 0.00 0.00 0.00 4.81 1.83 3.98 2.28 27.06 0.00 0.00 0.94 0.00 0.92 1.85 20 E5_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 2.42 0.00 0.00 9.89 0.00 3.76 37.87 0.00 0.00 0.00 0.00 0.00 7.77 21 ER5c ExonRegion 0 7.88 3.03 0.00 0.38 3.49 3.41 7.64 0.48 2.88 0.95 4.32 5.78 15.06 9.22 14.07 11.22 33.67 2.41 9.49 8.71 3.69 5.43 7.42 22 E5_Dc NovelBoundary 0 0.00 0.00 6.92 1.50 0.00 0.00 3.97 1.85 14.93 14.21 2.21 0.00 6.33 0.00 5.07 0.00 22.07 2.20 0.00 0.00 0.00 0.00 0.00 23 ER6a ExonRegion 0 4.38 1.21 15.24 1.24 3.73 15.30 3.88 4.47 27.29 2.94 0.00 0.00 81.33 6.30 9.72 10.14 211.59 0.00 0.00 1.44 2.49 10.89 10.91 24 E6a_E7a KnownJunction 0 10.00 3.29 22.80 1.83 12.48 55.65 3.36 3.86 21.79 5.05 0.00 0.00 147.56 12.36 23.73 7.35 282.00 0.00 0.00 0.00 0.00 11.21 16.13 25 ER7a ExonRegion 0 4.13 6.12 12.00 6.23 5.80 30.72 3.18 4.05 20.92 2.42 0.00 0.00 72.55 3.39 9.92 8.99 133.21 0.00 0.00 0.00 1.78 10.76 15.80 26 E7_Da NovelBoundary 0 0.00 0.00 5.50 0.00 0.00 0.00 0.00 0.00 3.30 0.00 0.00 0.00 13.64 0.00 0.00 0.00 50.77 0.00 0.00 0.00 0.00 2.51 8.02 27 E7a_E8a KnownJunction 0 0.00 9.41 11.32 5.26 0.00 28.62 3.75 4.27 14.87 0.00 0.00 0.00 46.26 2.47 4.45 0.00 70.87 0.00 0.00 0.00 0.00 8.21 0.00 28 I7_SR1 SilentIntronRegion 0 0.21 0.00 1.42 0.96 0.27 0.92 0.79 0.51 3.12 0.50 0.00 0.00 20.63 1.32 1.88 2.97 44.89 0.00 0.32 0.42 0.00 2.70 4.31 29 I7_AR2 ActiveIntronRegion 0 0.50 0.24 1.74 0.24 0.64 2.40 0.63 0.61 5.25 0.20 0.00 0.85 36.86 1.74 1.22 3.18 57.69 0.00 0.00 0.00 0.26 2.97 3.14 30 ER8a ExonRegion 0 3.35 5.51 9.60 5.99 5.49 16.52 1.61 3.21 16.63 1.34 0.00 0.25 26.42 1.50 4.28 1.49 15.18 0.00 0.00 0.27 0.17 6.09 2.07