Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HOMER1 Gene 0 6.02 28.35 20.10 13.50 8.87 14.62 9.04 9.58 11.47 17.52 14.70 61.12 41.05 3.24 27.72 31.18 10.29 10.57 13.59 24.91 24.70 60.05 22.22 2 334082 Transcript 0 6.90 32.63 20.02 12.20 11.01 19.41 10.73 7.82 14.57 19.22 24.41 81.36 56.97 6.13 29.57 64.21 17.38 22.49 18.41 41.48 56.78 70.86 41.38 3 282260 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 460741 Transcript 0 2.64 4.63 1.60 1.16 1.05 6.81 2.25 2.08 3.20 1.19 0.42 4.31 2.28 0.23 0.57 1.26 0.06 0.21 0.03 2.68 0.27 12.49 0.49 5 ER1a ExonRegion 0 1.54 9.33 7.47 3.92 2.24 6.51 3.64 2.90 5.67 12.64 15.47 20.20 18.99 2.19 12.53 34.64 11.11 17.23 16.48 22.62 46.30 31.86 26.34 6 E1a_E2a KnownJunction 0 2.82 26.84 14.52 18.15 11.46 23.51 12.28 8.71 22.16 36.61 37.17 51.32 54.22 0.00 35.35 134.15 17.77 26.41 57.79 62.96 74.44 132.26 52.67 7 ER1b ExonRegion 0 2.38 26.78 13.99 12.27 5.35 18.72 8.99 6.05 20.23 33.50 32.78 75.40 62.14 0.95 27.20 120.74 20.91 28.95 38.22 51.77 80.99 114.94 53.35 8 ER2a ExonRegion 0 6.58 27.86 21.42 12.45 11.81 25.64 13.19 8.54 22.61 32.55 33.04 106.50 84.48 5.10 28.77 85.19 33.20 27.32 38.22 47.93 76.98 88.07 59.93 9 E2a_E3a KnownJunction 0 14.60 45.32 17.33 15.22 14.86 55.99 22.39 7.85 20.14 22.91 48.96 92.13 126.13 2.47 43.39 145.69 38.15 23.46 27.58 66.60 68.14 149.72 85.45 10 ER3a ExonRegion 0 6.91 30.23 21.02 15.84 12.24 29.45 13.65 7.71 13.72 18.12 29.90 108.11 83.18 5.66 38.84 81.42 27.88 23.77 29.22 44.46 58.16 92.34 62.54 11 E3a_E4a KnownJunction 0 0.00 34.07 23.39 13.05 6.54 24.82 20.18 6.74 13.34 24.12 37.11 92.28 35.71 12.66 15.20 51.87 16.46 11.36 21.46 35.22 69.81 56.89 50.11 12 E3a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E4_Aa NovelBoundary 0 3.78 13.94 18.33 6.69 0.00 0.00 4.50 6.61 0.00 8.95 0.00 0.00 0.00 0.00 5.19 0.00 0.00 0.00 0.00 2.68 0.00 2.76 0.00 14 ER4a ExonRegion 0 6.08 41.09 15.28 13.32 7.25 14.63 12.76 8.20 16.07 21.45 36.73 94.55 55.52 6.01 32.72 59.28 27.79 29.17 15.89 44.84 74.62 86.84 47.74 15 E4_Da NovelBoundary 0 0.00 3.35 24.39 3.60 3.82 0.00 6.76 8.01 5.38 4.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.27 4.24 3.26 0.00 0.00 3.84 16 E4a_E5a KnownJunction 0 13.26 37.69 22.15 18.28 19.27 30.89 6.27 4.35 14.18 21.76 29.69 128.59 54.70 2.41 20.27 99.80 16.36 21.06 28.05 54.84 40.59 98.28 57.96 17 ER5a ExonRegion 0 12.08 35.04 17.49 13.44 14.51 22.18 18.96 7.36 17.27 20.87 32.24 91.60 90.32 5.93 41.01 82.35 21.15 27.37 23.32 50.52 73.24 75.75 58.12 18 E5_Da NovelBoundary 0 0.00 0.00 6.68 0.00 0.00 0.00 0.00 1.56 0.00 2.95 2.63 0.00 0.00 0.00 5.81 16.15 0.00 2.53 4.80 3.26 0.00 5.76 0.00 19 E5a_E6a KnownJunction 0 10.45 47.10 24.54 11.65 7.56 38.84 6.18 10.47 20.92 21.44 25.95 107.59 94.47 11.89 38.94 109.71 17.86 24.54 17.22 42.19 65.79 87.32 52.67 20 ER6a ExonRegion 0 2.40 27.96 21.34 12.44 8.86 18.03 12.08 7.86 16.81 16.90 22.55 73.21 59.63 8.80 35.76 75.57 20.69 30.02 20.76 51.99 67.71 67.04 40.61 21 E6_Da NovelBoundary 0 6.52 16.58 8.01 3.33 0.00 5.79 4.02 0.00 4.05 2.55 0.00 6.30 6.82 0.00 0.00 0.00 0.00 1.87 9.60 6.20 9.39 8.33 12.04 22 E6a_E7b KnownJunction 0 9.26 23.55 21.47 5.69 21.39 2.90 6.62 9.65 14.38 14.48 9.00 51.17 61.03 2.41 36.10 45.37 18.70 38.14 12.71 51.26 66.78 66.25 25.95 23 I6_AR2 ActiveIntronRegion 0 1.67 4.26 4.18 6.15 1.53 0.94 3.76 1.97 3.50 2.86 0.45 5.10 6.18 0.18 4.90 0.39 1.64 3.61 1.26 4.77 6.06 12.24 1.53 24 I6_AR3 ActiveIntronRegion 0 2.15 11.55 4.21 2.15 1.44 2.80 3.82 0.66 2.17 1.96 0.98 4.65 6.69 0.00 2.26 1.13 0.42 3.37 2.03 5.28 11.50 10.31 3.55 25 I6_SR2 SilentIntronRegion 0 1.13 2.10 1.30 2.47 2.11 2.55 3.34 1.89 2.25 1.52 0.86 5.78 5.36 0.24 1.61 2.12 0.00 0.91 2.55 3.58 8.09 12.83 3.79 26 I6_AR4 ActiveIntronRegion 0 1.18 3.88 2.24 2.26 2.94 6.73 1.84 0.63 2.30 1.19 0.81 5.60 6.86 0.00 1.14 2.48 0.00 0.51 2.21 5.21 4.80 13.29 2.86 27 E7_Aa NovelBoundary 0 3.70 5.66 3.08 8.56 3.31 26.29 2.12 2.30 2.86 2.23 2.00 0.00 6.82 0.00 0.00 0.00 0.00 0.00 0.00 6.14 2.35 16.66 0.00 28 ER7a ExonRegion 0 2.64 4.63 1.60 1.16 1.05 6.81 2.25 2.08 3.20 1.19 0.42 4.31 2.28 0.23 0.57 1.26 0.06 0.21 0.03 2.68 0.27 12.49 0.49 29 E7_Ab KnownBoundary 0 3.63 0.00 5.09 0.00 0.00 18.00 0.00 3.33 11.02 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.66 0.00 3.20 2.41 22.84 3.93 30 ER7b ExonRegion 0 15.03 20.85 26.98 11.19 9.44 23.84 16.50 12.95 23.31 16.87 25.30 77.14 65.06 8.71 42.86 75.74 21.01 27.09 20.21 46.13 38.20 75.46 38.36 31 E7a_E8a KnownJunction 0 36.97 34.53 20.31 23.74 4.33 32.03 30.34 18.03 26.19 16.31 27.16 70.82 67.85 14.07 54.14 74.00 24.78 27.57 21.37 55.22 58.50 57.68 61.80 32 ER8a ExonRegion 0 15.94 30.98 17.47 17.58 5.58 28.25 14.69 16.92 15.58 18.79 25.92 77.82 86.97 9.20 34.85 43.63 20.82 27.49 25.56 53.01 50.06 80.28 47.57 33 E8a_E9a KnownJunction 0 20.67 24.47 24.78 15.68 20.71 58.49 32.46 8.91 21.24 20.31 24.32 94.08 134.41 2.30 53.03 39.82 24.96 27.40 4.80 47.43 30.58 87.44 43.36 34 E9_Aa NovelBoundary 0 18.08 3.35 0.00 0.00 0.00 0.00 6.05 1.89 0.00 2.93 2.68 18.91 12.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.35 35 ER9a ExonRegion 0 12.34 32.00 21.85 21.98 15.77 22.72 16.57 14.11 15.95 24.68 22.23 95.46 71.07 5.41 37.36 40.66 17.18 16.23 17.14 43.12 29.62 96.29 39.68 36 E9_Da KnownBoundary 0 22.67 53.61 15.40 20.08 17.83 11.92 20.67 10.39 10.47 17.06 13.42 48.17 19.15 2.47 49.69 39.39 4.30 2.28 8.75 20.96 9.64 103.61 17.50 37 E9_Db KnownBoundary 0 6.52 14.80 2.48 3.13 11.71 10.05 6.01 2.01 3.85 10.64 11.42 42.31 5.84 0.00 4.45 0.00 9.54 3.69 9.41 9.01 8.15 41.46 4.10 38 ER9b ExonRegion 0 8.08 28.56 4.57 10.41 10.34 6.00 11.25 6.36 5.56 10.90 11.51 34.05 10.23 0.89 19.52 20.40 7.35 3.78 13.61 16.44 3.51 58.72 9.08 39 ER9c ExonRegion 0 7.04 37.82 27.07 18.02 11.45 15.91 9.88 12.85 12.54 19.37 10.96 73.08 42.36 2.83 33.60 19.28 6.27 3.49 9.85 19.88 6.18 67.51 12.92