Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C5orf37 Gene 0 73.07 86.01 53.51 46.37 78.42 101.46 65.56 59.28 54.65 65.35 97.69 149.55 122.70 111.71 99.43 95.70 109.67 72.78 35.13 73.45 17.77 31.76 28.17 2 380475 Transcript 0 0.00 0.00 0.00 5.49 0.00 7.33 0.00 2.30 0.00 1.34 2.47 6.30 0.00 2.59 10.01 8.03 8.23 4.31 0.00 3.26 0.00 3.06 0.00 3 428202 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 446329 Transcript 0 0.00 1.27 0.00 0.00 3.31 0.02 2.11 0.00 0.00 0.00 0.62 1.22 4.92 0.95 0.00 0.02 1.05 0.01 0.00 3.35 0.00 0.00 0.94 5 282199 Transcript 0 0.00 0.00 0.00 0.00 0.22 0.15 0.00 0.00 0.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 ER1a ExonRegion 0 33.76 71.69 2.21 10.92 37.75 54.72 21.75 10.69 11.37 13.53 37.49 3.81 9.64 36.74 33.10 47.72 63.13 40.65 13.09 40.40 15.50 9.29 12.39 7 E1a_E2a KnownJunction 0 17.71 49.79 7.63 12.15 44.99 28.00 34.62 21.07 15.86 16.73 54.54 12.90 42.37 44.44 33.01 40.76 63.30 40.71 4.14 37.78 2.84 0.00 8.28 8 ER2a ExonRegion 1 6.24 26.89 9.20 18.45 8.46 10.97 8.63 21.06 25.36 27.91 103.23 36.23 47.33 91.38 36.27 64.14 142.07 46.89 16.48 65.91 25.43 14.41 22.50 9 E2a_E5a KnownJunction 1 11.34 35.26 15.88 26.90 7.72 27.14 2.25 31.63 24.80 25.44 86.39 61.82 39.45 199.31 90.36 190.72 77.23 98.62 40.47 90.57 8.22 26.39 64.28 10 E2a_E6a NovelJunction 0 3.63 3.16 1.60 8.42 0.00 14.54 0.00 23.58 12.73 21.41 4.42 7.05 0.00 12.13 9.52 20.51 3.46 46.43 9.22 40.20 0.00 6.00 4.35 11 ER3a ExonRegion 0 0.00 2.54 0.00 0.00 6.62 0.05 4.22 0.00 0.00 0.00 1.23 2.44 9.85 1.91 0.00 0.04 2.10 0.02 0.00 6.70 0.00 0.00 1.87 12 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.45 0.31 0.00 0.00 0.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER5a ExonRegion 0 18.20 51.95 25.31 28.78 53.30 70.32 47.57 34.87 27.64 26.23 89.89 111.91 117.01 102.13 81.74 131.09 77.01 65.95 17.23 63.68 8.40 23.59 26.64 16 E5a_E6a KnownJunction 0 31.64 107.15 28.98 44.58 45.25 53.61 56.00 33.85 40.34 36.16 111.82 173.76 174.01 135.85 83.57 87.75 105.84 27.53 8.56 41.99 7.41 17.88 28.43 17 ER6a ExonRegion 0 44.40 92.43 26.37 37.97 68.14 107.91 55.05 51.11 55.12 50.11 129.48 222.92 163.43 116.53 83.07 85.24 129.32 52.09 13.16 60.66 12.51 31.48 16.89 18 E6_Da NovelBoundary 1 3.78 6.31 5.50 5.59 15.37 16.64 34.98 1.77 8.56 10.93 5.11 18.91 127.10 27.72 9.64 15.12 4.39 0.00 0.00 12.14 2.78 5.27 0.00 19 E6a_E7a KnownJunction 0 61.20 135.77 23.39 33.96 74.53 164.11 46.37 59.80 62.18 48.84 133.51 171.36 132.78 104.89 71.57 87.50 82.19 66.95 26.07 81.30 15.57 54.13 31.58 20 I6 Intron 0 7.96 7.04 2.88 5.88 10.06 10.21 16.58 7.07 9.07 10.16 10.04 49.50 60.25 23.25 16.48 20.79 19.37 5.23 2.76 12.80 1.99 7.05 4.53 21 I6_AR1 ActiveIntronRegion 1 7.98 11.67 4.79 5.99 10.53 10.53 19.11 9.71 8.45 10.09 4.75 60.68 92.65 20.99 17.94 18.52 8.65 2.42 3.13 12.90 0.72 9.57 1.44 22 I6_SR1 SilentIntronRegion 0 8.10 5.74 2.37 5.97 10.15 10.30 16.10 6.34 9.41 10.38 11.83 46.87 51.03 24.30 16.30 21.85 22.95 6.18 2.63 12.98 2.38 6.44 5.56 23 E7_Aa NovelBoundary 1 13.04 5.66 2.90 11.02 35.48 20.90 34.23 17.66 16.98 18.51 31.64 62.87 109.25 34.49 36.47 64.34 36.56 6.43 0.00 9.65 5.99 5.82 0.00 24 I6_AR2 ActiveIntronRegion 1 1.51 2.03 0.00 0.26 0.00 1.83 4.54 4.03 2.41 1.04 2.02 16.49 34.62 7.27 4.84 4.95 5.19 0.79 3.64 3.85 1.47 0.40 0.56 25 ER7a ExonRegion 0 59.30 93.68 26.83 43.24 67.57 111.81 64.80 61.04 71.87 71.35 141.92 247.41 203.15 153.42 97.56 114.89 163.23 58.28 29.18 83.33 13.40 35.50 28.61 26 E7a_E8a KnownJunction 1 37.78 65.45 33.17 35.29 63.75 166.38 98.53 63.01 74.71 82.79 122.56 117.64 275.47 144.74 85.91 141.24 130.43 59.15 34.17 99.71 5.68 39.19 27.49 27 ER8a ExonRegion 0 58.88 87.91 54.30 44.69 92.79 125.16 82.26 73.58 58.25 77.39 141.19 242.23 241.71 173.78 97.54 135.61 143.78 55.56 32.29 80.65 11.33 36.16 35.22 28 E8_Da NovelBoundary 0 0.00 0.00 2.54 6.49 8.23 2.38 3.97 8.83 20.63 2.39 0.00 51.17 28.08 22.13 8.78 7.60 0.00 0.00 0.00 21.73 3.15 5.69 4.10 29 E8a_E9a KnownJunction 0 89.05 166.81 77.14 38.99 84.38 110.85 106.08 55.70 53.59 69.22 117.66 178.71 152.43 157.81 118.05 109.54 158.67 57.62 22.12 68.33 8.09 19.41 19.63 30 ER9a ExonRegion 0 84.72 165.17 81.92 45.83 86.21 148.03 100.61 62.72 65.78 89.51 125.62 247.15 205.33 162.54 111.35 113.99 141.62 90.26 38.41 97.77 25.00 22.94 31.69 31 E9a_E10a KnownJunction 0 105.50 157.34 120.01 77.91 69.19 198.07 107.18 72.58 72.92 110.24 129.40 302.80 156.32 192.13 128.56 182.09 138.85 106.74 26.35 145.99 32.93 41.03 57.79 32 ER10a ExonRegion 0 81.10 136.29 94.76 68.92 111.91 150.60 105.76 75.08 86.97 98.49 117.05 271.84 167.25 168.92 138.34 146.23 137.15 108.73 40.44 119.99 26.15 37.90 48.32 33 E10a_E11a KnownJunction 0 87.65 156.81 74.04 63.33 200.51 218.00 103.03 85.76 83.56 90.61 107.24 210.67 127.59 129.50 123.62 124.58 123.70 75.24 21.27 81.62 8.40 25.41 36.79 34 ER11a ExonRegion 0 112.16 145.23 87.89 69.71 104.25 137.31 94.21 99.62 86.06 111.38 158.13 226.17 166.13 149.41 174.13 146.66 164.06 126.71 65.42 100.48 17.80 62.82 50.63 35 E11a_E12a KnownJunction 0 154.77 135.83 86.99 37.29 78.44 143.78 86.82 75.78 65.86 89.21 100.71 171.21 74.67 82.76 140.31 91.77 110.80 66.99 68.71 91.79 13.78 45.31 24.84 36 I11 Intron 1 7.10 7.60 4.19 9.55 7.60 6.98 11.97 5.22 6.51 6.53 5.49 29.84 41.37 12.10 10.37 11.06 11.47 3.11 1.48 10.08 0.48 3.26 1.46 37 I11_SR1 SilentIntronRegion 0 3.65 3.77 3.93 5.87 6.77 6.50 12.53 3.38 4.99 4.78 6.86 19.92 30.19 14.03 9.93 10.72 12.56 2.79 1.71 9.05 0.83 2.31 1.90 38 I11_AR1 ActiveIntronRegion 1 6.92 6.76 3.24 8.14 5.93 4.09 11.51 5.38 7.27 7.42 6.35 34.85 58.37 11.39 14.63 12.38 10.64 2.93 0.58 10.36 0.19 1.19 0.26 39 I11_AR2 ActiveIntronRegion 0 6.22 5.32 3.24 12.36 7.08 7.11 9.96 5.52 7.78 7.81 5.07 30.71 41.21 12.55 7.62 6.54 12.65 2.15 2.68 12.19 0.19 3.88 2.03 40 I11_SR3 SilentIntronRegion 1 5.98 14.42 6.64 13.38 10.51 8.37 12.84 4.28 7.14 8.55 2.83 35.71 59.94 10.06 9.43 11.81 14.60 5.16 0.29 10.23 0.00 5.22 1.88 41 I11_AR3 ActiveIntronRegion 1 14.14 16.64 6.47 13.22 10.48 10.36 14.91 7.77 8.26 7.84 4.06 43.94 42.78 9.22 11.16 17.03 8.53 3.58 1.27 10.33 0.46 6.50 1.25 42 I11_SR4 SilentIntronRegion 0 29.13 1.00 1.06 8.42 14.53 2.73 6.75 8.00 2.76 6.52 7.77 24.11 7.36 8.22 11.04 2.21 12.69 3.19 0.00 10.97 2.03 0.78 2.19 43 E12_Aa NovelBoundary 0 21.41 3.29 5.80 9.69 43.29 15.56 9.01 12.28 12.90 5.53 7.32 0.00 13.47 14.19 17.31 11.62 4.77 13.68 3.86 21.09 3.03 5.27 4.35 44 ER12a ExonRegion 0 135.01 106.73 67.94 52.99 105.17 136.60 79.80 72.38 60.82 74.34 78.74 153.91 105.64 98.43 124.60 83.25 102.79 113.73 45.47 90.43 17.86 44.42 31.98 45 E12a_E13a KnownJunction 0 78.24 66.96 86.75 85.47 117.57 177.80 102.90 86.71 59.11 55.77 62.33 142.10 122.72 131.73 179.00 93.65 45.16 90.62 57.51 80.15 11.68 27.68 52.33 46 E12a_E14a KnownJunction 0 0.00 0.00 0.00 5.49 0.00 7.33 0.00 2.30 0.00 1.34 2.47 6.30 0.00 2.59 10.01 8.03 8.23 4.31 0.00 3.26 0.00 3.06 0.00 47 I12_AR1 ActiveIntronRegion 0 0.00 2.35 2.45 3.67 0.00 5.50 8.45 6.91 6.18 8.20 3.42 7.33 28.86 4.37 4.69 7.54 3.30 1.71 0.00 4.26 0.00 1.28 3.61 48 I12_SR2 SilentIntronRegion 0 0.00 4.07 2.45 2.95 0.00 0.61 7.28 6.34 7.00 7.84 3.54 15.87 28.14 7.58 1.45 9.91 3.30 1.23 0.00 5.67 0.00 4.17 0.00 49 ER13a ExonRegion 0 110.35 75.72 112.88 84.36 119.55 129.46 98.24 91.56 83.46 103.66 115.24 126.36 106.15 135.46 145.19 121.91 136.23 113.90 72.80 86.75 34.57 38.68 38.89 50 E13_Da NovelBoundary 0 2.96 15.33 3.08 8.46 12.14 13.74 6.32 16.55 10.94 12.09 4.79 0.00 6.82 5.47 0.00 8.63 4.77 12.68 0.00 33.62 3.15 6.25 0.00 51 E13a_E14a KnownJunction 0 224.11 147.08 108.30 70.02 155.77 169.33 85.32 86.05 63.95 102.77 115.71 106.38 141.06 126.49 170.10 127.83 176.34 55.05 72.19 104.31 32.80 25.04 50.53 52 I13 Intron 0 18.77 18.55 10.65 18.37 21.28 14.69 17.72 10.68 11.45 12.30 5.44 11.48 16.19 7.72 6.69 6.13 5.37 10.65 5.56 20.05 1.88 3.76 3.03 53 I13_AR2 ActiveIntronRegion 0 7.85 17.31 3.83 16.28 17.21 11.26 14.82 7.39 10.26 9.40 4.75 12.10 9.19 7.17 5.84 3.73 2.42 5.92 6.42 15.45 4.46 3.01 2.17 54 I13_SR2 SilentIntronRegion 0 26.30 23.15 14.85 22.71 26.01 16.99 21.11 11.88 12.80 14.46 6.51 11.05 18.43 8.50 8.07 8.14 5.79 13.83 6.20 23.29 1.82 4.36 3.64 55 E14_Aa NovelBoundary 0 45.79 20.00 30.48 58.93 22.58 27.26 21.90 32.49 15.45 11.98 9.95 37.81 21.91 12.60 38.69 20.42 7.95 11.07 13.08 30.23 3.15 10.96 4.35 56 ER14a ExonRegion 0 80.93 52.22 52.61 49.46 75.74 73.48 50.50 59.69 44.90 57.97 62.15 73.48 73.79 70.12 90.18 55.29 58.34 40.78 33.63 45.23 16.95 27.60 15.05