Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TRIM23 Gene 0 24.26 87.31 28.35 64.41 69.98 65.70 52.46 52.23 76.12 58.53 18.24 43.37 28.63 22.14 12.13 18.78 19.24 28.49 21.29 47.68 31.34 56.69 35.60 2 231524 Transcript 0 15.92 46.25 17.38 32.88 45.59 35.14 30.49 29.64 38.61 30.68 10.35 26.16 16.56 11.77 7.38 6.26 7.69 9.93 15.99 22.21 8.28 31.15 13.38 3 381018 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 274327 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 1.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 0.00 5 ER1a ExonRegion 0 0.03 0.40 0.72 0.09 1.06 2.17 0.26 3.58 8.53 1.36 10.70 4.19 0.77 6.32 1.39 1.76 13.02 7.63 23.24 11.76 1.75 2.06 6.17 6 E1_Ab KnownBoundary 0 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 2.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.99 3.95 0.00 0.00 2.33 4.27 7 ER1b ExonRegion 0 3.89 15.30 2.79 3.49 11.05 21.40 11.50 2.47 8.30 5.40 1.55 0.00 0.00 8.52 0.00 3.46 5.84 9.54 1.62 16.74 17.92 9.05 13.86 8 E1_Ac KnownBoundary 0 12.89 68.47 11.86 6.46 61.21 105.22 49.11 6.45 23.96 15.39 5.37 0.00 0.00 27.19 0.00 19.23 17.39 52.77 12.89 66.47 73.64 37.23 47.12 9 ER1c ExonRegion 0 12.44 31.86 8.10 12.43 31.32 57.06 34.54 17.07 35.59 36.56 15.02 0.00 3.57 20.37 7.18 27.46 26.03 56.77 19.17 48.63 66.45 40.04 60.91 10 E1a_E2a KnownJunction 0 3.78 12.17 10.02 10.29 0.00 9.60 4.11 15.57 30.44 23.42 15.90 0.00 5.84 4.71 0.00 7.78 4.58 13.64 0.00 7.99 20.45 8.21 3.59 11 ER2a ExonRegion 0 3.61 12.74 7.97 17.02 9.16 9.89 9.09 19.99 49.09 41.33 18.91 8.23 13.38 21.53 6.89 27.06 29.67 67.03 16.92 60.76 78.60 46.04 52.39 12 E2a_E3a KnownJunction 0 6.89 25.65 6.09 28.04 45.93 44.24 20.01 26.70 43.63 51.31 14.58 43.36 39.28 19.72 0.00 38.54 21.60 114.41 20.42 66.99 25.76 51.07 70.77 13 ER3a ExonRegion 0 7.63 53.89 5.93 20.57 37.42 100.54 51.01 29.34 56.47 44.61 26.21 23.21 30.49 24.32 6.37 28.99 35.82 59.64 13.08 48.60 75.59 40.44 42.99 14 E3a_E4a KnownJunction 0 13.63 68.15 5.17 29.00 29.46 102.16 75.52 24.23 64.32 52.00 32.53 12.00 34.74 24.19 9.64 29.31 25.62 53.02 13.46 39.88 60.73 51.56 34.06 15 ER4a ExonRegion 0 14.65 64.69 8.78 45.39 36.16 66.08 40.26 39.73 82.43 60.89 31.67 42.32 39.60 37.16 10.76 37.66 39.86 66.46 21.54 62.31 84.15 60.11 72.16 16 E4a_E5a KnownJunction 0 30.60 74.92 8.87 56.04 31.83 119.14 51.89 36.35 97.51 43.46 19.69 42.01 34.41 47.80 15.70 43.15 30.95 72.29 34.35 56.63 109.41 42.19 67.27 17 ER5a ExonRegion 0 13.86 80.89 16.17 64.08 85.11 90.11 61.31 49.05 92.83 55.32 26.46 59.62 48.92 42.48 13.19 44.22 38.58 60.37 28.51 75.10 77.42 58.22 70.48 18 E5a_E6a KnownJunction 1 10.08 110.64 23.33 80.41 25.47 83.08 46.77 63.99 87.96 75.00 32.85 77.73 13.80 38.97 8.90 58.36 22.25 68.32 18.45 96.58 59.99 57.50 53.27 19 ER6a ExonRegion 0 17.93 88.71 14.82 51.78 57.71 70.47 59.96 43.08 83.08 64.28 34.68 45.28 33.18 37.10 9.97 28.92 43.89 58.73 27.06 66.08 58.58 49.94 60.08 20 E6a_E7a KnownJunction 0 22.82 77.88 19.48 63.40 107.22 97.22 55.51 31.87 106.05 68.71 44.17 31.06 33.93 48.62 31.65 24.87 54.14 41.25 24.47 41.48 81.73 58.36 83.14 21 ER7a ExonRegion 0 15.27 65.16 23.79 57.72 79.12 72.96 46.25 38.51 89.21 62.33 31.47 48.75 32.83 33.08 8.60 37.36 37.80 46.62 31.00 66.02 62.52 56.78 66.37 22 E7_Da NovelBoundary 0 0.00 0.00 1.18 3.60 4.16 2.67 1.94 5.13 1.62 5.35 0.00 19.81 6.82 0.00 0.00 3.50 0.00 5.72 4.33 0.00 11.18 2.33 0.00 23 E7a_E8a KnownJunction 0 22.30 56.17 27.59 55.77 66.38 115.16 69.73 43.00 88.11 65.52 13.53 39.16 25.32 37.02 9.77 22.81 30.76 28.15 18.26 71.33 57.64 30.62 69.66 24 E8_Aa NovelBoundary 0 0.00 9.87 3.28 6.66 12.65 2.38 31.13 13.51 5.67 2.98 0.00 0.00 0.00 0.00 0.00 0.00 4.49 0.00 0.00 9.33 2.47 5.69 0.00 25 ER8a ExonRegion 1 17.58 97.02 18.21 59.32 61.62 72.03 55.84 48.49 80.36 59.49 21.37 57.78 34.35 35.21 8.12 32.49 30.67 30.00 18.01 67.12 40.46 54.36 59.12 26 E8a_E9a KnownJunction 0 46.23 160.10 27.35 54.11 57.13 96.54 61.56 49.95 85.71 68.66 15.69 80.28 56.49 39.67 8.90 46.57 18.23 42.28 22.31 77.98 27.55 70.91 60.61 27 ER9a ExonRegion 0 24.65 131.67 21.79 71.68 72.87 93.87 74.87 48.91 84.42 59.06 27.86 44.00 47.45 34.85 8.57 28.17 23.34 37.85 50.22 61.57 26.70 67.10 47.17 28 E9_Da NovelBoundary 0 0.00 0.00 0.00 1.27 8.49 0.00 2.25 5.67 3.21 1.53 0.00 7.65 21.91 0.00 0.00 0.00 0.00 1.78 4.80 9.14 0.00 0.00 3.76 29 E9a_E10a KnownJunction 1 16.08 114.39 10.70 57.73 95.76 82.51 91.15 35.57 97.11 42.07 16.58 31.66 83.60 16.60 8.90 13.07 29.45 28.81 48.38 34.71 28.36 55.42 20.06 30 ER10a ExonRegion 0 20.34 89.49 22.97 81.22 59.55 75.08 47.90 52.38 89.03 54.73 26.98 51.33 29.42 29.29 17.22 24.16 31.58 58.12 45.31 87.11 44.41 76.99 57.91 31 E10a_E11a KnownJunction 0 13.19 107.28 36.93 66.76 66.21 72.17 34.54 55.78 75.20 36.45 11.21 24.31 20.62 49.15 10.88 16.24 37.12 71.38 53.93 84.12 78.33 81.87 64.11 32 ER11a ExonRegion 0 19.38 86.18 23.36 59.26 62.79 60.54 44.65 37.64 80.01 51.24 29.57 30.87 29.05 28.85 6.63 22.77 23.45 71.03 62.55 72.34 60.73 57.39 56.10 33 E11_Da KnownBoundary 0 24.45 137.08 10.79 50.31 121.39 93.53 101.04 26.37 66.43 39.54 32.17 39.01 34.74 23.31 10.14 15.04 18.05 53.14 46.02 82.84 58.07 38.76 61.21 34 E11a_E11b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 0.00 35 E11_Db KnownBoundary 0 27.71 117.41 31.78 57.93 86.84 58.49 51.98 37.58 56.31 36.16 29.53 68.42 14.12 25.37 35.35 21.96 25.06 22.14 22.21 48.07 55.91 49.23 45.84 36 E11b_E11b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER11b ExonRegion 0 23.50 134.36 25.90 68.94 117.36 71.14 76.15 43.33 77.64 48.05 31.93 65.69 20.86 30.24 15.71 13.73 22.99 42.63 32.73 65.96 65.43 46.27 64.61 38 ER11c ExonRegion 0 22.09 67.62 17.49 29.50 60.95 47.68 43.77 28.75 41.07 41.12 14.27 30.29 25.91 18.48 7.56 9.12 6.94 20.09 21.25 27.88 23.12 38.08 22.78 39 E11_Ab KnownBoundary 0 13.71 67.75 22.26 56.70 108.06 87.45 77.15 43.78 54.74 59.98 13.85 51.17 56.00 16.13 4.45 18.80 3.74 6.38 38.31 28.06 10.93 58.05 24.67 40 ER11d ExonRegion 0 28.89 69.48 27.78 73.22 118.33 90.37 76.67 51.92 71.45 57.75 18.00 38.40 44.82 24.06 12.09 12.99 12.35 7.19 15.40 54.92 6.94 62.74 41.87 41 E11_Dc KnownBoundary 0 61.57 96.56 35.39 91.83 121.31 85.01 66.20 53.19 82.64 45.83 21.22 56.87 35.55 24.07 4.94 3.50 8.51 1.66 17.41 57.27 2.53 61.72 38.93 42 E11c_E11c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER11e ExonRegion 0 41.57 116.98 46.17 101.93 118.19 90.72 77.92 84.87 103.10 80.25 16.44 70.14 34.86 21.31 20.58 14.17 10.78 9.43 19.48 48.78 8.24 82.78 24.58 44 E11_Ac KnownBoundary 1 149.14 339.54 68.68 111.84 97.88 83.65 118.71 124.58 122.22 88.99 7.53 95.28 50.16 7.36 10.26 16.49 21.41 6.59 15.91 47.75 5.07 91.67 11.95 45 ER11f ExonRegion 1 51.74 245.55 75.87 122.56 116.83 97.83 99.91 113.84 115.68 101.53 5.77 66.86 35.86 8.79 20.96 8.08 8.70 5.54 10.89 44.30 6.58 72.70 13.33 46 E11_Dd KnownBoundary 1 42.75 220.49 109.01 178.67 159.08 73.31 88.15 130.57 134.34 112.98 10.06 61.37 61.85 9.65 24.23 11.71 4.30 5.89 27.95 61.36 13.90 110.96 0.00 47 ER11g ExonRegion 0 24.98 98.89 46.15 79.32 46.34 36.90 33.12 53.48 71.65 58.74 3.73 23.83 18.25 4.66 8.35 6.28 4.20 4.72 7.50 22.42 4.25 44.32 8.48 48 ER11h ExonRegion 0 0.00 0.00 5.15 0.00 2.14 0.00 0.00 1.38 1.73 0.00 0.00 0.00 4.69 0.97 0.00 0.00 0.00 2.59 0.00 0.43 0.00 1.67 0.00 49 IG20 Intergenic 0 4.58 19.58 7.26 22.92 18.23 20.44 16.22 12.88 23.31 17.20 2.26 15.89 16.03 2.68 2.42 4.08 2.70 3.86 2.33 10.95 1.22 12.07 3.01 50 IG20_AR5 ActiveIntergenicRegion 0 2.46 12.79 3.40 12.77 12.46 16.64 9.24 8.40 14.57 7.16 2.25 12.22 15.57 4.85 3.74 3.46 3.84 5.57 1.48 11.89 3.59 11.64 3.42 51 IG20_SR2 SilentIntergenicRegion 0 4.57 20.83 6.81 25.83 20.51 20.78 17.72 13.00 23.30 17.18 1.99 19.15 16.99 2.96 1.38 5.09 3.30 3.66 3.01 13.87 1.52 10.89 4.13 52 IG20_AR4 ActiveIntergenicRegion 0 5.49 21.57 9.41 24.87 20.20 23.58 18.13 15.38 27.87 21.51 2.32 14.39 17.01 2.09 2.86 3.38 2.11 3.90 2.22 7.91 0.33 14.36 1.69