Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 COL4A3BP Gene 0 60.79 66.76 40.68 76.02 82.15 59.90 92.32 67.22 86.59 64.53 99.30 79.35 139.89 144.19 81.65 91.98 142.89 45.50 29.85 70.78 42.55 95.33 58.71 2 380494 Transcript 0 0.43 0.68 0.12 0.27 0.00 0.74 0.89 0.00 0.37 0.12 5.10 0.00 1.04 2.29 3.14 2.59 1.77 2.14 1.50 3.14 1.33 0.29 0.79 3 405807 Transcript 0 0.00 0.00 0.00 0.27 0.00 0.00 0.00 0.00 2.39 1.53 0.00 0.00 0.94 0.00 0.97 0.00 0.00 0.74 0.00 3.40 0.00 0.56 0.00 4 357457 Transcript 0 6.79 6.79 1.82 3.71 14.43 5.71 19.38 4.19 5.46 5.97 22.52 14.64 41.92 38.66 40.23 52.00 27.09 8.19 5.12 13.36 4.93 22.47 11.23 5 261415 Transcript 0 32.38 11.91 19.07 47.55 35.06 21.69 74.72 30.60 42.42 25.68 124.61 149.60 200.31 187.89 73.80 126.80 204.67 43.44 55.91 37.39 48.06 67.17 65.56 6 ER1a ExonRegion 0 0.85 1.36 0.25 0.55 0.00 1.48 1.78 0.00 0.74 0.23 2.40 0.00 2.07 2.46 1.83 5.19 3.54 0.63 2.99 6.28 2.66 0.58 1.58 7 E1a_E2d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.79 0.00 0.00 2.12 4.45 0.00 0.00 3.65 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 0 0.00 0.00 0.00 0.27 0.00 0.00 0.00 0.00 2.39 1.53 0.00 0.00 0.94 0.00 0.97 0.00 0.00 0.74 0.00 3.40 0.00 0.56 0.00 9 ER2b ExonRegion 0 0.00 0.00 0.61 3.41 0.00 0.00 0.00 0.00 8.65 12.62 0.00 4.33 11.73 0.00 5.80 0.00 0.00 3.70 0.00 14.89 0.00 2.08 0.00 10 ER2c ExonRegion 0 3.17 1.92 4.79 11.79 1.26 5.37 5.81 5.14 22.59 19.65 21.24 21.57 44.82 27.14 16.90 28.68 31.97 16.41 7.02 24.82 31.16 10.17 25.37 11 E2_Ad KnownBoundary 0 10.45 0.00 2.81 5.63 0.00 8.18 3.67 1.93 16.87 3.95 19.64 18.31 38.96 25.43 4.45 34.95 30.29 16.29 13.08 11.70 18.53 3.06 3.76 12 ER2d ExonRegion 1 5.45 12.21 5.45 9.30 10.13 13.91 16.59 10.76 28.38 21.08 64.36 5.38 20.11 120.26 51.53 76.72 98.00 66.50 20.57 48.89 69.67 31.69 56.03 13 E2a_E3a KnownJunction 1 24.75 27.50 21.02 28.47 11.21 32.25 21.42 31.79 73.64 52.60 137.56 22.96 73.37 223.03 111.26 136.12 185.04 77.39 40.28 91.91 103.48 100.91 96.97 14 ER3a ExonRegion 1 25.62 29.13 25.44 29.90 29.25 30.70 66.43 35.90 76.34 53.31 148.16 39.51 120.86 212.47 94.37 150.17 249.45 81.86 33.32 107.25 78.97 87.86 85.82 15 E3a_E4a KnownJunction 0 20.82 34.60 24.95 35.16 23.43 13.80 81.88 38.98 110.99 54.85 172.62 75.62 170.93 266.23 96.30 247.71 232.26 101.52 28.42 136.08 82.53 80.28 91.34 16 ER4a ExonRegion 0 19.65 32.71 25.86 40.84 40.73 33.09 69.04 50.52 99.77 67.09 186.12 86.92 156.09 258.28 104.40 193.92 320.89 103.63 47.56 139.26 112.58 103.57 106.92 17 E4a_E5a KnownJunction 0 17.41 25.39 24.98 44.38 29.03 60.93 64.88 57.38 110.01 62.64 196.84 140.00 281.31 264.53 151.06 272.32 280.97 144.71 105.98 125.34 130.29 125.77 132.40 18 ER5a ExonRegion 0 28.08 43.50 21.39 45.71 41.45 38.70 79.50 45.16 97.05 66.29 161.13 142.39 264.51 277.05 117.58 202.60 274.25 141.13 50.17 143.99 134.77 109.17 105.42 19 E5a_E6a KnownJunction 0 23.56 28.09 15.14 53.67 25.64 44.41 80.95 56.76 86.69 78.89 171.89 142.70 271.25 400.56 148.34 233.44 295.28 110.51 58.73 163.95 166.55 134.29 93.90 20 ER6a ExonRegion 0 32.83 46.27 18.69 54.36 58.50 56.53 101.14 51.79 118.06 74.95 244.21 128.61 292.10 304.10 119.74 189.47 325.48 136.04 70.63 160.16 105.18 135.46 128.41 21 E6a_E7a KnownJunction 0 44.30 36.31 18.42 36.06 51.19 73.08 115.22 42.22 92.62 67.29 186.57 141.05 343.65 194.01 105.82 120.05 236.84 88.34 34.35 134.16 56.34 108.93 106.36 22 ER7a ExonRegion 0 23.76 45.13 13.25 40.58 52.78 73.94 119.53 49.47 103.28 74.79 237.01 153.54 407.03 255.70 86.35 161.03 306.24 75.67 53.17 118.72 59.84 131.78 109.91 23 E7a_E8a KnownJunction 0 46.30 41.77 15.32 53.17 55.01 67.86 110.67 46.62 111.20 83.22 233.64 257.78 584.54 256.70 107.92 204.65 291.07 53.06 60.71 113.90 49.92 180.52 92.45 24 ER8a ExonRegion 0 30.56 45.01 24.43 50.95 73.28 53.21 97.86 64.08 104.95 73.03 202.92 202.88 440.36 244.16 90.14 134.08 295.05 51.50 47.60 100.73 46.86 136.37 93.32 25 E8a_E9a KnownJunction 0 18.45 31.70 26.34 64.79 78.10 70.13 135.62 28.88 102.81 70.57 145.30 159.20 371.73 243.69 89.13 106.90 275.64 48.21 25.41 71.20 65.48 75.19 83.91 26 E8a_E10a NovelJunction 0 0.00 2.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.05 0.00 0.00 7.06 4.45 0.00 4.77 0.00 0.00 0.00 0.00 0.00 3.67 27 ER9a ExonRegion 0 50.25 47.45 28.01 57.40 70.20 96.23 136.98 62.84 116.31 88.15 208.11 225.64 464.16 269.67 97.02 180.72 338.40 68.11 55.59 117.64 55.78 150.89 104.14 28 E9a_E10a KnownJunction 1 74.09 62.82 34.59 65.76 90.75 118.40 171.53 84.98 102.17 81.26 179.84 302.50 500.29 259.46 114.22 122.96 302.85 75.94 71.25 117.74 85.31 135.14 116.69 29 ER10a ExonRegion 0 40.09 33.33 22.00 57.73 88.55 75.57 80.97 44.58 86.00 66.09 169.43 211.05 330.46 240.01 91.91 120.25 293.17 79.67 45.73 84.05 73.31 101.30 121.11 30 E10a_E11a KnownJunction 0 47.34 35.72 30.22 60.90 50.68 82.62 113.41 38.12 96.47 49.83 168.36 161.90 229.69 262.47 84.68 167.05 234.78 81.12 25.79 114.28 52.20 100.06 129.24 31 ER11a ExonRegion 0 30.29 55.08 17.59 55.28 74.03 62.25 88.43 44.33 87.83 55.84 155.67 163.54 234.40 238.90 80.61 162.67 264.92 86.05 34.80 106.20 85.61 101.38 91.79 32 E11a_E12a KnownJunction 1 2.82 36.11 0.00 6.76 47.45 25.95 3.75 22.80 46.82 21.79 16.32 12.60 19.80 47.15 21.88 11.02 90.32 30.76 0.00 45.57 22.24 19.78 7.34 33 E11a_E13a KnownJunction 0 32.38 11.91 19.07 47.55 35.06 21.69 74.72 30.60 42.42 25.68 124.61 149.60 200.31 187.89 73.80 126.80 204.67 43.44 55.91 37.39 48.06 67.17 65.56 34 ER12a ExonRegion 0 5.24 15.83 1.65 9.12 19.66 33.83 12.37 20.90 52.05 25.04 33.21 26.81 21.83 46.79 15.77 18.21 57.47 39.47 7.31 42.80 17.29 20.54 22.97 35 E12a_E13a KnownJunction 1 6.08 15.66 4.61 7.29 11.88 45.37 27.16 12.24 48.12 19.74 27.01 37.96 25.00 80.11 14.09 27.17 47.22 40.67 3.76 50.43 19.27 17.08 27.49 36 I12_AR1 ActiveIntronRegion 0 4.84 27.90 2.59 10.91 29.13 3.60 12.17 14.84 8.49 7.56 0.40 4.11 4.67 0.48 11.19 1.71 3.39 0.78 1.56 3.96 0.00 0.68 3.36 37 I12_SR2 SilentIntronRegion 0 2.35 9.54 2.71 13.24 9.23 2.94 12.56 16.15 9.99 9.50 0.24 4.40 7.29 1.45 10.94 5.14 10.17 1.93 4.72 6.57 0.00 1.80 0.73 38 I12_AR4 ActiveIntronRegion 0 4.42 8.55 3.93 15.59 7.10 1.90 12.39 27.22 16.96 8.56 0.96 5.41 5.03 0.44 5.88 1.73 7.13 1.07 1.05 9.31 0.81 1.72 0.72 39 ER13a ExonRegion 1 38.01 42.20 25.59 56.83 56.39 84.53 104.19 52.59 85.26 65.68 133.31 196.00 205.04 232.55 93.63 155.01 256.99 85.29 51.60 102.93 75.94 104.83 93.94 40 E13a_E14a KnownJunction 1 45.34 84.72 22.38 67.06 49.66 71.32 127.06 73.40 86.78 64.74 126.56 155.90 254.69 257.82 61.19 191.92 251.61 59.57 38.50 105.40 43.00 155.72 65.05 41 ER14a ExonRegion 0 33.71 60.52 21.34 67.92 55.95 62.00 103.73 64.21 99.25 72.37 176.02 147.33 198.71 233.89 94.48 151.24 301.75 79.26 42.46 100.34 87.80 132.19 90.88 42 E14a_E15a KnownJunction 0 49.93 84.46 26.08 67.76 65.45 97.84 155.36 82.93 87.01 59.02 172.94 171.21 230.67 187.18 111.13 111.25 240.11 75.24 41.13 103.67 61.84 88.54 94.24 43 ER15a ExonRegion 0 43.79 64.27 25.92 95.79 98.36 93.99 134.65 83.77 100.50 73.08 180.58 144.58 241.11 193.98 149.52 185.78 277.18 88.72 39.12 94.40 79.89 149.40 104.85 44 E15a_E16a KnownJunction 0 49.34 61.24 32.70 106.01 115.53 67.75 158.99 84.45 115.51 85.50 132.40 151.85 294.46 237.27 136.97 178.50 307.25 78.31 56.28 150.40 101.50 177.09 113.11 45 ER16a ExonRegion 0 31.44 68.51 40.86 104.93 70.92 72.00 109.95 87.11 105.65 78.66 164.39 149.92 258.32 301.72 121.49 176.78 313.53 87.30 42.50 129.69 87.64 128.10 135.13 46 E16a_E17a KnownJunction 0 93.42 75.18 42.52 101.02 62.73 82.74 127.54 109.26 101.79 90.04 114.45 129.19 306.80 312.09 238.46 189.01 246.38 83.86 52.43 119.84 86.36 125.22 156.98 47 ER17a ExonRegion 0 48.13 68.97 31.10 75.39 98.49 81.62 126.52 62.98 91.15 72.98 147.41 101.28 244.42 288.04 117.61 167.22 232.56 72.60 41.43 107.54 84.47 112.32 110.80 48 E17a_E18a KnownJunction 0 21.71 47.43 19.46 59.13 63.84 77.91 154.88 67.90 85.27 83.27 127.82 87.18 256.96 256.93 87.52 139.62 180.46 69.43 26.26 96.39 64.19 139.06 96.89 49 ER18a ExonRegion 0 44.28 73.45 26.01 65.62 66.17 75.55 110.71 55.30 88.18 73.55 145.97 81.50 158.13 263.87 113.13 143.33 230.65 69.88 35.32 77.78 75.65 109.42 82.01 50 E18_Da KnownBoundary 0 6.52 18.62 6.21 3.56 27.76 7.89 23.58 6.65 16.23 10.34 16.58 5.85 53.08 48.80 72.07 56.57 50.77 13.51 9.60 19.18 5.81 27.68 23.82 51 E18a_E19a KnownJunction 0 43.19 72.29 15.29 49.21 72.75 63.77 95.17 40.17 64.67 56.84 90.39 56.72 102.75 165.23 54.52 148.68 151.29 50.99 17.88 58.80 58.75 119.04 79.56 52 ER18b ExonRegion 0 6.79 6.79 1.82 3.71 14.43 5.71 19.38 4.19 5.46 5.97 22.52 14.64 41.92 38.66 40.23 52.00 27.09 8.19 5.12 13.36 4.93 22.47 11.23 53 E18_Db NovelBoundary 0 40.75 8.62 16.85 12.72 10.19 4.66 59.53 6.24 15.02 12.06 19.32 11.70 54.54 63.16 55.38 60.16 20.01 17.82 17.41 2.81 21.87 84.07 30.13 54 I18 Intron 0 7.40 8.30 3.13 8.91 12.20 8.48 20.06 8.61 13.75 7.46 15.70 16.24 36.66 24.94 10.57 19.17 18.06 7.65 6.36 15.24 6.02 16.47 12.56 55 I18_SR1 SilentIntronRegion 0 6.08 5.94 3.29 4.53 7.55 5.77 13.99 3.94 7.74 5.55 8.12 10.35 36.64 26.70 13.67 15.91 11.20 4.63 4.70 11.59 2.63 16.52 7.16 56 I18_AR2 ActiveIntronRegion 0 5.59 6.11 2.28 9.78 14.79 8.55 19.84 8.53 16.11 9.39 20.09 30.77 54.46 29.44 10.49 23.54 18.08 9.25 9.28 20.17 7.59 19.70 16.08 57 I18_SR2 SilentIntronRegion 0 9.11 10.70 3.59 10.49 12.99 9.77 23.19 10.86 15.28 7.34 16.82 10.95 27.30 22.05 9.43 18.46 21.36 8.20 5.56 14.33 6.73 14.90 13.17 58 I18 Intron 0 3.80 5.48 2.87 5.48 14.43 7.00 16.95 4.63 8.27 5.38 10.86 5.78 9.73 15.58 5.75 17.36 10.38 5.16 2.86 4.78 2.48 10.30 12.54 59 I18_AR1 ActiveIntronRegion 0 3.84 5.53 2.90 5.52 14.56 7.07 17.11 4.67 8.34 5.42 10.95 5.83 9.82 15.72 5.80 17.52 10.47 5.21 2.89 4.82 2.50 10.39 12.65 60 ER19a ExonRegion 0 42.95 98.39 19.57 45.22 62.80 76.59 107.90 33.35 57.03 45.98 90.39 51.32 88.70 182.95 56.40 131.12 160.19 38.64 20.33 64.39 49.00 117.90 77.73 61 E19_Da KnownBoundary 0 65.94 137.21 26.70 43.92 80.39 77.80 144.63 29.86 52.20 33.39 81.65 71.27 96.10 153.10 74.05 91.26 131.37 30.72 22.59 73.63 36.20 120.57 78.88 62 ER19b ExonRegion 0 95.86 96.40 63.06 110.23 119.12 75.31 116.35 94.69 105.19 79.82 79.77 70.58 113.87 112.23 88.59 69.82 97.01 27.96 27.75 62.36 23.68 109.45 44.58 63 IG7_AR5 ActiveIntergenicRegion 0 14.80 9.28 5.08 11.90 14.15 5.63 5.42 8.35 20.24 8.33 6.12 5.13 7.65 4.25 14.43 6.59 13.16 1.96 5.98 7.18 4.04 3.91 6.01 64 IG7_SR1 SilentIntergenicRegion 0 3.82 5.60 6.46 5.15 10.28 4.35 2.94 16.16 10.10 11.34 6.66 5.14 2.96 4.67 9.32 4.92 3.95 23.51 3.52 12.91 4.20 3.41 3.86 65 IG7_AR1 ActiveIntergenicRegion 0 3.49 7.06 4.60 5.52 11.13 6.33 5.44 20.03 9.76 9.83 9.08 4.45 8.68 4.34 5.82 5.14 8.87 17.42 5.44 16.90 2.14 3.44 3.49