Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PTCD2 Gene 0 11.09 24.09 20.37 16.58 15.98 15.42 16.50 10.92 12.57 16.45 30.56 33.14 28.41 36.18 28.15 32.99 34.37 15.30 15.51 24.96 27.61 15.19 11.82 2 486995 Transcript 0 5.51 4.80 1.73 2.31 3.03 1.54 3.50 2.52 1.87 2.23 2.70 9.61 13.03 4.25 4.56 7.22 6.19 0.29 3.38 5.34 2.99 2.03 2.43 3 380639 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 308077 Transcript 0 2.52 10.99 10.10 12.52 16.28 7.22 11.55 3.59 8.29 15.91 17.13 30.82 15.77 24.99 18.91 33.63 20.09 9.48 21.71 15.31 12.90 11.06 3.24 5 493283 Transcript 0 0.00 0.00 0.44 0.77 0.81 0.00 0.00 0.48 1.35 0.00 1.65 0.00 0.00 3.00 0.00 0.00 0.00 1.88 0.00 0.81 1.79 1.56 0.90 6 460837 Transcript 0 0.60 0.97 1.41 1.41 3.08 0.10 0.51 0.83 0.11 0.08 0.51 1.78 0.30 0.35 0.64 1.55 4.10 0.05 0.08 1.15 0.07 0.16 0.56 7 ER1a ExonRegion 0 1.41 1.36 0.00 0.00 0.00 0.00 1.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1b ExonRegion 0 3.31 6.61 0.00 0.51 0.67 0.46 7.36 0.00 0.39 0.14 0.85 0.00 0.00 3.45 5.44 2.23 5.57 0.00 0.00 0.00 5.78 5.08 1.10 9 ER1c ExonRegion 0 7.14 17.03 0.92 1.36 4.68 1.83 18.87 0.00 2.93 2.15 4.83 0.00 0.00 12.18 16.68 5.94 25.17 3.46 0.00 0.00 24.24 12.24 2.94 10 ER1d ExonRegion 0 16.93 27.93 6.27 6.72 5.89 10.00 13.25 1.19 9.63 6.41 12.42 2.28 5.41 17.08 9.20 13.83 25.39 4.72 10.34 5.80 16.23 10.85 10.60 11 E1_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.93 0.00 0.00 2.94 0.00 0.00 0.00 12 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.00 13 E1a_E3a KnownJunction 0 17.71 0.00 2.93 6.83 4.33 0.00 0.00 0.00 7.93 7.41 35.48 0.00 14.61 10.30 0.00 4.36 25.90 2.57 0.00 5.56 18.04 2.39 0.00 14 ER1e ExonRegion 0 2.90 4.18 0.42 0.31 2.86 1.40 4.97 0.39 0.83 0.39 1.91 8.30 6.06 2.87 5.92 3.26 3.28 1.00 4.13 5.48 2.80 0.79 4.48 15 E1_Db NovelBoundary 1 0.00 0.00 0.00 1.40 0.00 0.00 1.90 0.00 1.39 0.00 0.00 17.86 0.00 0.00 0.00 0.00 0.00 3.98 0.00 3.26 0.00 0.00 0.00 16 E1b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 4.36 7.57 0.00 0.00 2.43 2.72 0.00 0.00 17 ER2a ExonRegion 0 0.00 0.00 0.00 0.22 0.00 0.00 0.00 0.00 0.00 0.00 1.93 0.00 0.00 1.86 0.00 0.00 0.00 0.00 0.00 0.00 1.34 0.00 0.00 18 E2a_E3a KnownJunction 0 0.00 0.00 0.00 1.33 0.00 0.00 0.00 0.00 0.00 0.00 4.69 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER3a ExonRegion 0 3.73 2.01 8.75 18.16 5.38 1.60 2.14 8.46 11.02 14.29 39.05 30.68 19.67 57.66 22.06 38.67 51.79 18.64 10.96 38.27 41.11 21.13 18.98 20 E3a_E4a KnownJunction 1 11.34 3.35 18.98 23.24 28.52 5.00 4.46 6.33 16.00 18.75 20.79 62.57 33.76 51.80 33.99 64.51 12.90 15.34 22.02 34.71 11.74 20.15 43.28 21 E3a_E5a KnownJunction 0 0.00 0.00 1.77 1.53 3.23 0.00 0.00 1.93 5.38 0.00 0.00 0.00 0.00 7.65 0.00 0.00 0.00 7.50 0.00 3.26 2.84 6.25 3.59 22 ER4a ExonRegion 0 6.19 21.18 14.81 16.61 23.11 26.84 40.92 12.17 15.99 16.66 47.70 50.19 42.97 40.82 24.13 44.10 67.87 14.07 13.72 34.16 35.38 16.04 15.84 23 E4a_E5a KnownJunction 0 9.41 60.65 14.67 22.24 15.79 28.05 18.81 19.22 12.70 26.54 65.49 108.34 60.87 87.70 31.03 51.10 70.87 10.11 4.24 36.50 52.33 23.27 10.84 24 ER5a ExonRegion 0 18.65 40.41 16.87 23.55 12.81 11.48 11.56 14.65 13.26 19.04 64.21 71.47 52.11 70.44 29.87 48.06 78.63 21.03 11.74 37.20 54.44 28.80 18.62 25 E5_Da NovelBoundary 0 3.33 0.00 0.00 1.93 0.00 0.00 0.00 2.34 2.95 0.00 0.00 0.00 8.12 0.00 0.00 0.00 16.36 0.00 0.00 2.94 8.77 3.12 0.00 26 E5a_E6a KnownJunction 0 20.82 32.43 15.37 21.01 19.35 8.18 9.80 22.02 8.80 20.07 38.22 70.67 33.76 40.56 29.92 42.38 86.86 17.41 13.74 23.27 41.58 17.21 12.12 27 E5a_E7b NovelJunction 0 3.70 8.62 4.58 0.00 0.00 0.00 2.03 0.00 5.58 1.45 9.95 0.00 0.00 0.00 0.00 0.00 8.88 4.31 0.00 9.08 2.78 0.00 8.71 28 ER6a ExonRegion 1 19.96 30.48 12.92 23.32 37.46 14.74 26.78 20.09 13.24 17.99 55.42 68.78 33.72 56.60 19.65 49.13 73.20 16.70 13.02 34.39 37.44 20.12 16.43 29 E6a_E7b KnownJunction 0 27.86 20.52 16.14 25.04 55.35 28.05 35.68 25.06 7.12 19.50 56.65 61.07 93.01 72.99 42.65 61.78 66.39 12.81 13.74 46.21 17.24 33.49 8.19 30 ER7a ExonRegion 0 0.60 0.97 1.41 1.41 3.08 0.10 0.51 0.83 0.11 0.08 0.51 1.78 0.30 0.35 0.64 1.55 4.10 0.05 0.08 1.15 0.07 0.16 0.56 31 E7_Ab KnownBoundary 0 0.00 0.00 2.87 0.00 0.00 0.00 8.04 2.34 1.24 0.00 2.58 0.00 0.00 0.00 0.00 0.00 4.21 0.00 0.00 9.46 0.00 0.00 3.67 32 ER7b ExonRegion 0 25.35 41.52 20.49 20.94 29.61 23.54 33.77 25.85 10.25 22.96 57.33 49.53 64.63 55.29 38.93 54.48 66.78 18.86 11.17 32.13 20.41 35.15 17.26 33 E7a_E8a KnownJunction 0 22.23 38.55 23.74 28.70 26.57 21.64 45.05 29.37 11.49 27.88 44.48 80.73 53.89 45.15 46.23 54.34 59.19 22.22 8.28 35.92 19.09 31.84 26.89 34 ER8a ExonRegion 0 15.76 39.01 27.30 25.34 34.03 21.38 24.13 17.51 17.54 24.40 51.29 78.92 50.07 52.17 28.27 47.87 52.29 18.40 16.96 35.80 21.05 23.50 20.58 35 E8a_E9a KnownJunction 1 19.48 49.73 38.53 27.90 60.78 15.45 40.14 10.93 14.44 25.87 30.69 126.49 88.14 54.74 28.18 63.23 38.71 17.41 27.39 37.97 26.01 35.09 33.12 36 E9_Aa NovelBoundary 0 3.78 11.97 0.00 7.39 4.33 2.61 2.25 1.97 1.19 1.26 0.00 6.30 0.00 0.00 0.00 4.19 13.28 0.00 0.00 5.11 0.00 0.00 0.00 37 ER9a ExonRegion 1 19.92 62.63 34.11 25.06 39.24 29.37 37.62 12.12 18.21 26.79 42.50 102.69 64.53 46.15 33.04 49.30 35.83 17.15 12.10 32.88 17.51 32.31 20.99 38 E9a_E10a KnownJunction 0 16.30 76.43 35.92 28.40 41.26 50.14 54.19 12.12 27.84 29.84 34.59 68.72 46.26 55.45 13.35 49.13 47.22 15.79 7.62 40.01 23.04 30.74 11.35 39 ER10a ExonRegion 1 19.05 57.62 28.59 24.76 27.20 46.46 39.06 10.08 27.17 26.19 37.05 59.89 57.06 61.99 14.51 49.54 39.61 20.33 11.15 31.91 19.47 28.82 8.81 40 ER10b ExonRegion 1 27.18 81.44 40.83 31.67 47.44 34.38 31.09 8.16 22.60 29.98 33.31 97.25 67.61 71.69 46.26 56.80 44.87 29.89 24.01 39.46 32.77 26.08 17.35 41 E10b_E11a KnownJunction 1 28.38 42.16 63.13 37.16 40.32 48.49 32.46 14.46 22.92 37.93 38.17 149.30 48.21 73.17 59.34 53.83 64.70 46.80 16.57 73.95 90.63 25.23 23.90 42 ER11a ExonRegion 0 21.83 58.66 49.57 23.40 26.93 30.52 23.72 11.07 18.35 30.20 41.47 66.36 38.19 72.31 57.06 65.29 47.31 40.26 37.06 38.63 66.61 22.28 13.84 43 E11_Da KnownBoundary 0 22.60 94.92 35.95 17.01 27.67 27.88 14.53 5.87 17.48 24.39 34.06 23.71 32.47 89.65 65.39 60.67 57.04 42.20 58.26 42.12 80.37 28.96 11.52 44 ER11b ExonRegion 0 19.42 38.62 59.45 33.28 25.28 33.68 24.44 23.39 26.77 39.11 67.69 36.33 36.99 81.21 75.03 75.63 66.54 41.86 37.49 49.29 80.87 27.20 28.68 45 E11_Db KnownBoundary 0 51.42 62.09 84.09 35.03 53.06 74.84 50.88 43.17 23.70 48.94 75.55 62.87 89.28 56.57 85.05 48.88 72.28 21.18 20.61 37.71 81.36 26.45 31.50 46 E11b_E12a KnownJunction 1 0.00 8.62 11.24 8.69 19.02 0.00 6.01 0.00 3.07 17.22 7.53 42.16 6.17 19.48 25.96 36.40 8.88 6.38 28.05 7.93 8.46 8.08 0.00 47 ER11c ExonRegion 0 14.79 28.20 36.35 28.21 16.59 18.40 17.99 27.41 19.83 23.59 36.09 38.94 41.70 30.33 56.12 25.19 29.38 11.35 18.08 34.71 25.79 19.67 11.76 48 E11_Dc KnownBoundary 1 3.48 26.90 12.80 18.61 3.23 13.17 10.20 24.60 12.09 24.50 15.32 11.85 65.58 14.54 14.71 12.90 22.63 0.00 9.04 26.27 11.37 8.70 0.00 49 ER11d ExonRegion 1 17.71 13.66 6.51 8.92 9.25 4.76 7.27 9.70 6.63 8.53 8.88 30.15 46.08 11.65 12.32 21.27 13.90 0.16 9.39 13.44 6.46 7.35 5.26 50 E11_Dd NovelBoundary 1 12.82 9.14 10.56 16.28 10.70 17.09 20.93 16.31 18.61 10.96 11.37 25.51 52.76 7.24 0.00 11.45 21.32 4.31 18.92 20.07 5.19 13.78 15.02 51 I11 Intron 0 1.84 12.39 2.85 4.60 4.66 5.75 5.07 4.04 5.13 2.97 5.05 9.62 11.09 8.55 4.43 5.17 14.36 4.96 4.44 13.33 11.51 5.08 5.62 52 I11_SR1 SilentIntronRegion 0 1.97 13.20 4.09 5.23 4.61 6.12 7.38 5.75 6.01 3.23 7.16 11.64 15.16 10.85 4.97 6.78 19.25 8.21 7.31 15.27 15.82 7.17 7.68 53 E12_Aa NovelBoundary 0 6.22 25.39 9.91 9.06 31.92 13.86 26.50 6.61 15.48 5.51 22.06 13.05 17.86 21.01 6.30 7.95 40.21 10.40 32.28 21.54 31.51 12.49 15.19 54 ER12a ExonRegion 0 5.03 13.37 8.96 16.35 13.55 14.44 17.09 7.18 13.52 14.60 26.73 19.47 25.37 30.49 11.86 30.86 31.30 12.58 15.38 22.70 17.34 14.03 6.49 55 IG28_SR1 SilentIntergenicRegion 0 11.00 14.58 11.56 15.01 13.43 15.23 15.12 10.65 9.57 15.33 14.64 26.23 25.72 21.46 19.28 24.80 15.83 9.55 15.15 22.11 14.27 11.36 7.63 56 IG28_AR1 ActiveIntergenicRegion 0 11.07 15.27 10.42 13.66 21.36 15.52 15.98 12.07 14.25 15.59 9.52 25.53 16.88 10.16 11.41 10.17 10.09 4.75 7.65 16.09 3.97 7.38 3.70 57 IG28_AR2 ActiveIntergenicRegion 0 4.17 6.77 6.60 5.59 5.81 10.43 5.47 7.99 8.76 10.52 7.08 3.60 4.00 11.23 5.11 10.50 7.16 9.61 6.30 17.24 13.30 3.06 3.85 58 IG28_SR3 SilentIntergenicRegion 0 0.88 3.71 7.49 8.49 2.61 10.52 7.37 6.26 16.04 14.90 7.10 5.92 3.68 14.00 8.74 11.25 12.95 18.17 12.30 19.04 13.39 6.78 11.00 59 IG28_AR3 ActiveIntergenicRegion 0 3.64 9.64 5.13 6.46 8.97 13.46 11.43 3.52 12.81 11.56 4.98 9.84 9.02 10.55 8.72 11.44 9.23 8.29 5.58 16.20 5.29 2.96 5.77 60 IG28_SR4 SilentIntergenicRegion 0 6.74 7.84 4.32 5.56 6.65 15.82 8.58 1.14 7.06 0.88 1.55 8.71 3.50 7.00 2.74 7.45 8.81 1.48 7.14 6.83 1.72 1.37 7.07 61 IG28_AR4 ActiveIntergenicRegion 0 14.77 22.03 19.23 29.30 24.69 20.89 19.53 13.08 16.44 25.76 9.45 19.31 9.09 11.66 11.88 6.35 8.06 5.32 6.99 18.02 4.64 7.11 3.56 62 IG28_SR5 SilentIntergenicRegion 0 29.45 30.32 28.42 35.93 29.88 29.77 16.86 21.39 19.78 22.68 7.05 9.82 6.30 12.36 14.29 9.44 11.94 4.13 12.77 22.69 4.90 5.57 4.85 63 IG28_AR5 ActiveIntergenicRegion 0 16.94 20.38 20.74 23.52 23.35 17.60 10.38 15.44 14.44 18.25 6.52 5.17 3.30 6.70 17.01 8.53 5.83 7.54 9.18 19.70 8.79 4.46 5.11