Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZFYVE16 Gene 0 51.64 91.10 41.93 83.78 98.83 113.26 71.19 78.46 94.08 82.63 51.20 146.39 104.92 66.96 27.99 35.79 49.68 35.95 33.14 73.08 33.49 204.81 126.98 2 338008 Transcript 0 12.05 4.98 0.75 1.62 8.11 21.76 13.33 6.15 12.73 13.10 12.88 0.71 0.82 14.73 2.45 25.55 17.76 40.30 13.87 20.49 22.71 40.21 108.44 3 425484 Transcript 0 5.84 23.09 7.54 10.04 10.66 14.47 10.09 4.52 12.85 8.67 1.60 6.58 2.57 2.27 1.59 0.73 7.06 5.41 8.48 9.30 4.42 7.73 9.66 4 IG10_SR2 SilentIntergenicRegion 0 0.00 0.00 0.13 2.09 4.68 0.00 0.00 1.60 1.15 0.00 0.00 5.88 1.17 0.17 0.00 0.00 0.94 2.51 0.00 1.44 1.89 2.08 13.21 5 IG10_AR2 ActiveIntergenicRegion 0 1.55 0.75 0.63 2.00 0.75 1.35 0.00 0.62 1.79 0.63 2.13 4.05 1.18 5.40 5.39 4.53 2.42 3.91 1.17 2.83 3.65 4.80 28.52 6 ER1a ExonRegion 0 7.28 3.78 1.50 3.24 7.57 35.96 22.91 5.86 18.49 18.76 16.55 1.42 1.65 23.98 4.90 42.98 35.51 56.47 23.59 32.30 38.07 51.21 153.03 7 E1a_E2b KnownJunction 0 16.82 6.18 0.00 0.00 8.66 7.55 3.75 6.45 6.97 7.44 9.21 0.00 0.00 5.47 0.00 8.12 0.00 24.13 4.14 8.69 7.35 29.21 63.85 8 ER2a ExonRegion 0 2.31 3.33 1.23 0.00 5.59 0.50 0.72 1.57 1.68 3.44 1.41 0.39 0.43 1.48 0.00 0.54 1.20 3.19 0.58 0.58 2.00 3.98 7.74 9 ER2b ExonRegion 1 10.72 13.26 6.26 9.68 13.90 30.83 25.28 21.97 41.34 29.26 50.51 73.84 57.24 55.28 6.29 43.40 61.13 74.85 27.40 59.40 56.70 67.73 176.20 10 E2a_E3a KnownJunction 1 8.82 15.92 5.50 12.42 4.33 24.42 26.90 19.92 43.52 21.01 45.43 112.69 48.37 64.92 5.07 41.36 54.89 79.96 29.08 79.07 51.95 144.08 215.71 11 E3_Aa NovelBoundary 0 0.00 6.05 0.00 4.56 7.30 0.00 4.50 0.00 0.00 4.43 4.47 6.00 8.28 0.00 0.00 0.00 10.66 0.00 13.84 6.39 0.00 0.00 7.34 12 ER3a ExonRegion 1 9.70 25.87 10.68 19.63 27.37 51.98 44.63 30.43 56.85 43.59 56.85 197.25 141.94 81.98 11.99 41.84 62.73 35.37 27.69 84.21 44.16 174.53 140.92 13 E3a_E4a KnownJunction 0 10.52 27.36 15.94 31.66 54.67 29.41 49.24 30.97 64.09 56.65 56.86 125.59 148.53 106.72 37.09 69.55 53.20 76.23 36.42 102.71 57.89 189.09 198.81 14 ER4a ExonRegion 1 18.92 31.45 17.00 24.11 54.40 80.33 49.82 37.69 53.45 36.71 64.30 106.50 108.98 104.80 18.19 49.91 56.73 55.43 34.02 72.43 47.60 171.13 174.56 15 E4_Da NovelBoundary 0 9.71 9.01 0.00 11.05 6.28 23.40 26.54 9.69 20.78 8.35 14.58 24.46 61.03 22.37 0.00 15.72 17.95 9.20 8.56 29.59 9.02 27.80 28.77 16 E4a_E5a KnownJunction 1 0.00 19.21 9.43 15.52 31.58 95.74 32.33 19.72 35.01 21.60 58.59 95.58 49.02 76.93 8.90 54.43 71.53 24.75 30.97 26.08 45.96 140.47 145.54 17 I4 Intron 0 12.01 16.50 6.17 24.85 17.38 40.79 29.58 16.61 31.15 21.16 11.95 39.57 51.05 21.07 5.56 11.99 14.51 11.28 9.00 36.23 7.02 33.91 28.35 18 I4_SR1 SilentIntronRegion 0 8.28 14.30 2.99 18.24 15.54 38.72 27.39 13.39 29.98 17.64 11.28 37.91 48.40 21.68 4.43 15.87 16.37 10.97 11.00 37.84 7.40 29.63 28.87 19 I4_AR1 ActiveIntronRegion 0 15.20 23.41 9.63 31.25 20.34 39.54 37.51 20.09 29.91 20.65 10.64 36.45 50.96 20.79 5.06 10.08 10.85 11.94 6.68 40.32 5.01 39.85 30.28 20 I4_SR2 SilentIntronRegion 0 15.24 14.92 8.82 31.62 17.69 45.04 27.87 18.97 35.09 28.56 14.22 46.30 56.05 20.48 7.58 6.96 13.56 11.29 6.51 29.93 8.15 35.93 26.34 21 I4_AR2 ActiveIntronRegion 0 17.63 12.65 6.66 21.96 20.64 46.57 20.00 19.87 26.53 17.67 13.03 33.75 51.46 19.62 9.46 10.02 21.25 11.36 16.23 35.15 7.12 38.19 24.22 22 E5_Aa NovelBoundary 0 13.11 27.96 6.27 57.83 33.96 50.37 46.19 23.25 46.47 32.77 11.90 80.58 86.68 26.19 10.75 3.42 23.47 16.08 17.04 32.41 15.38 33.43 16.90 23 ER5a ExonRegion 0 29.28 37.11 19.66 51.06 60.68 109.52 59.90 41.69 80.54 63.67 63.95 126.62 119.77 102.84 22.85 56.69 76.04 53.11 39.70 76.88 51.32 184.91 187.09 24 E5a_E6a KnownJunction 0 50.97 54.07 25.22 83.61 68.34 96.14 82.32 30.76 104.31 96.92 61.91 208.87 71.10 118.25 24.85 59.22 64.70 53.14 84.52 43.59 48.99 241.50 188.40 25 ER6a ExonRegion 0 29.35 34.12 15.27 60.06 50.02 106.30 63.99 32.80 101.50 85.09 65.65 156.16 95.37 84.45 20.35 43.33 68.46 50.79 37.40 69.90 51.41 186.82 174.97 26 E6_Da NovelBoundary 0 2.74 6.45 6.15 16.05 0.00 2.44 8.61 0.00 6.77 1.48 4.95 12.60 20.13 4.94 0.00 8.63 4.77 5.68 16.47 15.79 0.00 11.63 12.12 27 E6a_E7a KnownJunction 0 32.52 44.53 14.52 48.78 92.70 113.12 70.53 39.68 65.19 86.68 42.38 125.74 66.39 53.21 19.53 40.42 59.09 44.23 21.37 64.05 14.21 148.00 157.75 28 E6a_E8a NovelJunction 0 3.11 0.00 1.83 10.09 4.33 13.80 6.05 8.83 8.33 4.73 8.84 5.70 6.82 4.24 0.00 0.00 0.00 4.27 0.00 0.00 0.00 3.12 7.85 29 I6_AR1 ActiveIntronRegion 0 2.43 9.18 4.74 8.43 6.16 7.84 4.79 6.57 7.63 4.29 3.15 22.90 25.17 6.05 1.35 6.85 4.11 4.24 4.95 17.82 1.45 9.57 4.55 30 ER7a ExonRegion 0 31.64 40.37 25.40 51.32 85.90 111.52 65.99 50.40 97.78 78.56 69.46 174.87 98.89 72.23 27.29 37.52 64.61 44.61 29.35 95.10 36.69 223.63 139.40 31 E7_Da NovelBoundary 1 3.48 3.09 7.95 8.19 12.82 10.56 4.24 9.98 10.39 7.71 0.00 12.60 33.93 4.24 4.45 0.00 21.13 0.00 8.85 14.89 2.90 21.06 0.00 32 E7a_E8a KnownJunction 0 20.45 42.82 16.29 40.15 61.55 95.00 32.90 67.40 78.27 67.40 68.60 203.77 69.64 94.36 42.15 27.86 79.57 82.74 40.94 84.56 29.59 151.68 125.83 33 ER8a ExonRegion 0 24.18 65.31 29.37 82.91 79.34 100.92 68.96 72.15 114.34 74.38 75.49 132.10 102.30 82.53 19.86 47.72 67.63 43.93 25.35 73.95 48.45 200.48 139.24 34 E8a_E9a KnownJunction 0 35.78 71.50 31.49 87.10 153.23 130.21 74.46 81.00 113.11 88.40 66.28 112.09 188.30 98.48 54.89 39.65 49.37 23.38 17.04 68.20 22.18 212.11 117.89 35 ER9a ExonRegion 0 52.28 93.61 45.69 114.10 99.00 125.78 82.93 90.81 128.54 91.34 62.57 165.57 140.37 79.07 31.32 40.45 53.83 44.91 29.44 73.87 22.84 247.58 143.91 36 E9a_E10a KnownJunction 0 59.12 102.22 51.74 117.00 110.36 172.00 106.34 109.05 122.74 95.23 66.17 189.81 96.42 76.52 38.20 15.21 48.15 19.65 42.35 63.21 20.08 266.67 142.64 37 ER10a ExonRegion 0 56.59 115.83 38.10 105.54 126.96 150.80 93.21 83.04 118.72 99.25 59.83 201.66 148.18 69.39 29.17 34.42 50.76 34.34 42.50 80.01 32.75 240.43 154.10 38 E10a_E11a KnownJunction 0 43.79 200.42 36.87 66.09 138.46 195.29 73.58 66.09 120.40 99.04 46.17 199.72 70.77 54.27 32.26 18.88 59.75 18.61 41.51 67.37 31.38 172.56 161.25 39 I10 Intron 0 6.99 14.09 10.90 14.60 14.26 8.26 18.24 13.31 11.24 9.03 4.45 13.46 15.61 5.35 3.04 5.06 6.61 6.25 6.63 12.10 2.91 23.87 13.17 40 I10_AR2 ActiveIntronRegion 0 11.47 15.45 14.91 22.60 25.89 11.43 22.41 29.03 13.87 16.63 3.57 11.03 17.05 5.48 5.61 5.47 8.37 9.70 2.38 11.45 3.34 21.49 22.50 41 I10_AR3 ActiveIntronRegion 1 1.91 2.03 8.58 14.08 10.45 7.25 11.85 21.89 7.47 12.83 0.00 8.45 21.44 17.01 5.80 6.65 3.30 2.55 9.56 10.33 1.78 22.32 36.92 42 I10_SR2 SilentIntronRegion 0 8.95 16.77 14.56 16.43 13.47 7.79 17.61 15.46 13.02 10.88 5.33 15.90 18.80 5.74 3.57 4.52 6.44 6.81 5.49 13.72 2.73 28.06 9.99 43 I10_AR4 ActiveIntronRegion 0 2.91 14.26 3.94 12.92 7.05 7.62 13.18 7.72 11.39 5.02 3.93 12.67 6.80 5.73 1.45 10.19 8.42 6.64 13.23 12.44 4.19 21.27 18.28 44 I10_SR3 SilentIntronRegion 0 4.10 2.19 3.93 9.18 33.44 15.39 40.17 4.99 5.54 4.05 2.91 9.26 17.63 2.61 1.58 1.92 6.41 3.17 5.48 6.41 2.85 15.69 15.17 45 E11_Aa NovelBoundary 0 14.08 60.52 5.80 5.09 7.39 7.44 6.67 8.63 16.00 6.96 4.69 6.60 29.71 7.42 0.00 12.99 4.77 6.55 4.80 17.71 0.00 42.31 0.00 46 ER11a ExonRegion 0 72.98 203.19 34.33 71.94 150.23 177.17 83.79 64.79 117.05 90.80 59.50 182.78 108.94 61.29 26.11 25.03 67.25 22.71 31.47 75.34 37.76 236.17 159.32 47 E11_Da NovelBoundary 0 0.00 70.18 5.59 4.93 8.40 44.97 16.43 8.50 15.94 14.59 0.00 17.71 20.29 0.00 4.45 0.00 4.02 4.68 4.24 26.59 0.00 48.93 8.37 48 E11a_E12a KnownJunction 0 101.80 152.01 24.27 93.46 78.27 137.65 66.07 49.17 106.80 79.86 58.17 146.60 81.65 52.03 25.96 21.96 20.66 31.46 38.40 78.43 9.39 205.99 122.58 49 I11 Intron 0 9.01 34.45 4.53 11.53 14.00 15.13 14.44 9.82 16.16 14.71 4.80 14.68 26.53 6.75 2.36 4.48 8.78 1.63 3.39 17.55 1.76 42.50 14.85 50 I11_AR1 ActiveIntronRegion 0 4.60 37.48 5.90 9.21 12.18 13.11 12.25 8.81 18.66 17.03 5.49 22.40 26.28 6.01 2.50 4.23 11.83 3.04 3.63 19.41 1.99 44.69 15.82 51 I11_AR2 ActiveIntronRegion 0 9.12 42.30 3.93 10.16 16.13 11.30 14.07 4.68 16.24 7.88 4.02 15.15 24.86 7.77 4.30 5.00 7.80 2.23 4.43 17.23 2.04 43.43 8.46 52 I11_AR7 ActiveIntronRegion 0 10.58 41.01 1.58 11.41 23.86 24.30 21.57 6.91 10.09 9.46 3.87 19.84 24.43 1.29 0.00 2.97 10.45 0.00 0.27 19.41 2.20 48.44 7.95 53 I11_SR1 SilentIntronRegion 0 15.15 27.48 4.18 16.67 14.60 18.74 17.48 15.92 15.84 18.88 5.18 5.27 31.00 9.00 1.75 5.03 5.74 0.00 3.42 16.45 1.35 41.93 20.51 54 E12_Aa NovelBoundary 0 10.37 17.50 6.33 16.68 19.95 28.96 36.21 38.69 36.98 11.26 5.05 25.06 13.47 9.89 0.00 0.00 0.00 6.01 4.80 17.77 3.09 49.54 27.40 55 ER12a ExonRegion 0 75.77 138.61 45.74 116.21 151.63 158.63 93.89 78.93 131.86 120.98 61.56 154.58 122.12 75.36 34.65 44.50 58.32 44.38 39.68 103.04 25.67 256.39 140.57 56 E12a_E13a KnownJunction 0 102.24 122.41 33.53 142.67 175.72 159.57 105.90 102.19 157.49 128.35 63.81 126.49 109.08 61.45 27.44 60.58 91.63 42.20 55.15 93.89 46.33 285.47 162.19 57 ER13a ExonRegion 0 71.95 117.04 38.65 112.39 116.38 179.43 94.02 96.70 156.95 111.01 80.06 155.25 117.06 90.11 43.68 50.93 70.68 62.46 50.97 101.34 74.24 240.38 193.88 58 E13a_E14a KnownJunction 0 100.76 123.99 37.79 87.87 102.89 164.05 101.35 105.11 133.88 116.77 58.17 130.54 69.48 99.59 32.39 67.85 69.47 73.83 65.88 76.89 119.29 248.36 187.03 59 ER14a ExonRegion 0 79.02 108.21 39.39 84.94 113.97 121.21 86.83 84.31 125.83 106.89 90.80 134.80 119.39 97.01 41.66 46.12 87.45 68.00 50.73 94.33 84.39 223.14 210.28 60 E14a_E15a KnownJunction 0 75.49 124.78 36.07 107.88 133.45 123.51 107.49 97.14 129.57 109.60 64.96 174.96 140.58 73.81 48.71 31.79 53.95 71.55 52.14 105.46 98.47 236.85 190.27 61 ER15a ExonRegion 0 75.47 105.48 35.20 96.25 117.93 156.89 80.27 113.55 130.27 116.34 91.34 139.29 85.92 97.80 47.81 54.56 75.80 70.78 65.41 92.73 64.42 271.57 225.29 62 E15a_E16a KnownJunction 0 85.42 96.43 34.86 115.54 123.68 181.32 97.42 128.19 140.16 102.85 81.55 112.84 95.61 105.19 61.19 67.16 63.21 55.67 56.66 95.30 43.24 368.07 222.37 63 ER16a ExonRegion 0 100.37 102.62 44.39 98.42 137.47 180.92 89.87 133.96 160.26 113.39 96.44 188.21 123.09 98.29 54.08 66.20 60.13 66.17 66.71 108.53 35.84 321.63 221.55 64 E16_Da NovelBoundary 0 0.00 17.30 6.39 1.90 7.22 10.51 8.66 17.83 4.34 16.39 17.32 51.02 14.77 7.06 4.57 12.22 13.37 4.02 0.00 3.07 0.00 32.33 12.63 65 E16a_E17a KnownJunction 0 116.76 83.01 62.77 130.92 178.44 178.87 132.97 159.74 176.68 124.05 92.08 185.61 79.05 84.17 30.16 67.16 67.60 52.85 32.85 106.93 16.74 397.90 236.11 66 I16_AR1 ActiveIntronRegion 0 2.39 3.39 0.68 4.98 7.00 7.46 5.85 4.24 11.64 5.58 2.03 14.72 21.84 6.80 1.64 4.93 2.51 6.34 0.97 9.59 0.34 25.47 3.80 67 ER17a ExonRegion 0 96.11 126.77 62.48 130.18 163.89 244.53 122.58 134.95 165.74 123.36 96.62 165.96 123.00 94.24 50.43 68.11 74.39 76.93 55.72 95.00 49.03 334.44 205.81 68 E17_Da NovelBoundary 0 16.74 2.96 11.21 20.64 12.14 17.94 20.09 34.54 35.16 13.30 10.48 37.81 25.32 31.49 18.17 8.54 13.00 19.15 4.14 12.21 10.93 71.09 32.35 69 E17a_E18a KnownJunction 0 159.88 175.10 59.87 143.07 239.73 255.53 135.23 147.37 141.81 123.48 76.76 133.09 112.17 112.43 28.56 88.95 65.45 64.92 36.24 83.86 37.75 239.97 225.61 70 I17 Intron 0 11.21 7.98 6.79 13.24 20.99 18.22 21.86 15.61 15.01 15.93 10.64 18.75 22.66 15.73 7.84 10.14 9.75 6.19 5.84 11.93 5.62 47.88 19.15 71 I17_SR1 SilentIntronRegion 0 8.95 4.01 5.15 9.16 14.70 13.95 19.21 14.15 12.97 12.28 16.05 20.16 19.43 16.40 6.23 12.13 12.09 11.15 6.28 16.79 8.70 49.01 23.17 72 I17_AR1 ActiveIntronRegion 0 12.54 10.26 7.75 15.61 24.64 20.70 23.43 16.49 16.22 18.06 7.58 18.01 24.57 15.40 8.79 9.04 8.46 3.39 5.61 9.20 3.88 47.39 16.93 73 E18_Aa NovelBoundary 0 21.49 12.17 8.46 35.13 52.55 54.23 54.28 35.57 20.75 19.47 15.11 31.96 25.49 7.18 4.70 11.88 14.03 3.77 18.26 15.08 7.78 85.48 18.35 74 ER18a ExonRegion 0 104.48 181.81 91.31 169.99 191.13 172.21 103.55 148.57 127.30 131.20 33.05 112.54 80.55 46.85 46.47 23.26 25.93 21.89 34.01 59.22 13.02 250.05 81.49 75 E18_Da KnownBoundary 0 6.67 60.58 22.71 39.16 11.46 34.98 27.56 18.81 15.45 18.96 0.00 36.46 0.00 4.59 4.45 0.00 12.72 10.57 9.04 17.51 0.00 21.55 3.93 76 ER18b ExonRegion 1 9.38 42.86 13.86 20.08 15.73 28.44 19.46 7.48 24.01 13.90 1.80 12.76 4.70 3.06 3.18 0.91 12.92 7.62 16.37 18.02 6.83 11.48 11.57 77 IG11_AR2 ActiveIntergenicRegion 0 8.16 9.74 7.59 6.20 3.45 32.33 2.90 5.83 13.96 4.42 4.80 0.00 1.59 10.11 8.05 2.92 30.88 19.73 30.57 15.41 45.39 8.54 13.55 78 IG11_AR3 ActiveIntergenicRegion 0 0.99 0.00 2.80 0.64 1.19 2.16 0.32 0.15 5.43 0.20 1.80 0.00 2.08 1.41 0.06 0.53 8.14 1.48 4.32 0.80 16.01 0.88 1.76