Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC025171.4 Gene 0 21.80 26.50 21.63 30.55 37.35 18.99 16.57 27.73 37.36 27.73 23.50 15.36 14.06 27.97 20.82 29.55 22.96 33.70 29.54 39.68 18.16 12.99 24.05 2 499046 Transcript 0 16.87 17.12 20.07 27.41 32.11 14.48 13.38 22.72 31.72 23.50 19.12 9.91 11.38 23.65 19.20 25.38 17.43 28.23 24.71 31.70 15.68 12.22 18.33 3 IG13 Intergenic 0 39.53 30.49 26.00 28.41 29.80 29.79 20.40 30.85 45.62 43.37 42.89 18.28 29.46 50.20 53.65 69.69 41.19 73.25 74.42 60.05 45.40 20.41 45.99 4 IG13_AR1 ActiveIntergenicRegion 0 39.65 30.59 26.08 28.50 29.90 29.89 20.47 30.95 45.77 43.51 43.03 18.34 29.55 50.37 53.83 69.91 41.32 73.49 74.66 60.25 45.55 20.48 46.14 5 ER1a ExonRegion 0 17.93 16.08 11.97 23.48 22.60 8.08 15.39 15.17 25.46 15.78 19.20 7.25 5.28 19.01 16.60 23.08 16.47 23.51 17.52 20.65 14.15 12.38 8.52 6 E1_Da NovelBoundary 0 14.60 2.50 6.18 8.02 7.64 0.00 8.44 10.93 13.95 4.84 12.11 0.00 0.00 4.94 13.35 7.18 9.16 8.54 9.13 15.02 17.73 6.12 0.00 7 E1a_E2a KnownJunction 0 3.19 0.00 18.63 21.24 29.20 5.39 6.49 13.14 25.95 14.77 5.26 0.00 6.82 7.42 13.60 11.96 0.00 12.97 9.32 17.64 11.06 8.57 7.51 8 I1 Intron 0 8.85 5.10 2.54 3.40 6.71 0.51 8.12 8.61 7.18 5.72 12.93 2.98 2.00 7.24 6.75 7.45 12.88 8.71 5.33 6.52 5.53 5.23 4.91 9 I1_AR1 ActiveIntronRegion 0 8.93 5.16 2.57 3.43 6.79 0.52 8.21 8.71 7.26 5.78 13.06 3.01 2.02 7.32 6.83 7.54 13.02 8.81 5.39 6.59 5.59 5.28 4.96 10 E2_Aa NovelBoundary 0 17.78 0.00 12.54 5.49 24.36 0.00 15.68 7.27 12.07 8.70 6.79 0.00 11.36 9.24 9.64 8.72 12.62 8.54 0.00 11.57 0.00 4.96 3.50 11 ER2a ExonRegion 0 55.58 49.79 64.01 83.60 90.14 50.20 37.80 74.25 89.29 77.78 65.38 31.06 38.81 88.34 62.81 85.89 64.38 95.78 90.95 102.09 46.69 33.72 64.18 12 E2_Da NovelBoundary 0 53.34 22.89 46.39 62.70 7.81 0.00 21.24 34.91 47.97 36.67 34.64 31.36 31.33 43.85 46.23 76.65 25.25 39.63 27.01 59.12 5.31 14.94 11.35 13 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.82 0.00 14 I2 Intron 0 24.18 19.39 15.07 20.84 24.36 9.84 13.98 13.37 17.07 13.40 10.57 14.47 15.08 16.36 17.37 16.97 10.63 10.26 12.57 22.39 5.03 7.10 10.47 15 I2_AR1 ActiveIntronRegion 1 45.25 30.02 26.61 36.80 33.34 11.81 17.76 18.27 30.87 18.68 28.16 15.50 25.64 41.97 40.61 41.59 26.58 27.48 25.05 38.35 13.51 11.78 20.83 16 I2_SR1 SilentIntronRegion 0 16.29 10.52 9.44 9.77 16.74 5.96 8.76 7.13 9.30 7.81 6.04 8.27 12.94 9.92 10.51 15.37 7.54 5.97 9.58 13.05 5.04 3.76 14.48 17 I2_SR2 SilentIntronRegion 0 2.98 5.01 3.85 9.28 7.53 4.51 11.18 8.14 3.24 0.60 6.80 5.02 4.08 10.47 16.45 15.66 9.29 3.56 16.81 8.22 3.88 2.93 6.18 18 I2_AR8 ActiveIntronRegion 0 31.76 26.78 30.41 39.00 29.64 20.79 26.73 30.79 33.42 24.13 12.69 14.37 14.71 26.40 18.87 22.59 13.06 21.25 17.06 47.57 2.92 11.06 14.75 19 I2_SR3 SilentIntronRegion 0 22.04 25.84 15.73 16.10 26.08 11.68 16.43 15.22 12.96 13.26 8.31 14.90 11.09 11.29 15.83 10.16 7.61 6.07 9.36 23.53 3.07 5.20 7.60 20 I2_AR11 ActiveIntronRegion 0 23.16 16.29 16.43 24.86 31.62 9.96 14.86 13.84 19.72 20.71 9.40 31.21 19.05 7.50 13.66 11.65 6.55 3.06 5.93 13.83 2.60 10.18 7.99 21 I2_AR12 ActiveIntronRegion 0 12.85 18.20 9.45 28.11 35.73 6.44 14.96 20.17 19.81 26.75 8.30 40.77 21.64 11.01 11.88 8.70 10.52 6.12 7.20 24.09 3.51 11.52 7.01 22 I2_SR5 SilentIntronRegion 0 24.81 20.88 7.39 12.69 25.18 6.81 9.81 5.01 11.03 7.86 3.23 13.66 16.39 8.19 10.52 6.46 5.21 3.83 10.58 13.78 3.45 5.88 3.99 23 E3_Aa NovelBoundary 0 10.89 6.05 0.00 7.69 16.13 4.66 13.51 12.12 20.14 11.34 10.16 6.45 19.97 7.42 8.90 0.00 3.65 1.91 8.66 8.95 2.41 2.76 4.35 24 ER3a ExonRegion 0 7.66 19.74 5.74 8.72 18.59 8.74 7.21 11.04 17.90 9.17 5.78 11.22 5.98 3.47 3.01 5.97 6.28 8.89 5.74 18.11 6.50 3.63 11.46 25 IG14 Intergenic 0 11.23 15.61 6.74 18.68 17.33 10.18 4.20 13.56 21.34 16.23 2.45 2.92 3.22 2.34 3.27 4.67 3.31 9.46 10.45 10.24 6.54 4.98 8.03 26 IG14_SR1 SilentIntergenicRegion 0 17.45 8.20 5.78 14.74 15.41 6.21 7.50 9.57 20.73 11.53 7.95 5.86 10.33 5.73 1.08 11.62 0.50 14.58 2.35 20.27 6.59 2.15 16.52 27 IG14_AR1 ActiveIntergenicRegion 0 19.35 18.05 8.24 21.81 17.61 8.89 6.86 16.95 30.74 21.25 5.65 6.35 7.13 4.69 6.08 11.60 7.38 29.71 13.38 26.98 10.42 6.88 16.36 28 IG14_SR2 SilentIntergenicRegion 0 12.44 19.79 8.83 22.16 18.85 9.77 6.54 15.66 21.17 17.39 4.08 5.14 7.87 3.75 4.64 5.35 4.41 10.78 8.75 16.17 8.25 6.14 9.40 29 IG14_AR2 ActiveIntergenicRegion 0 23.16 31.67 18.34 50.41 61.70 37.29 11.94 29.40 54.08 41.34 3.39 5.84 4.52 4.67 4.80 12.04 6.36 20.35 37.92 13.06 10.68 9.55 15.59 30 IG14_SR3 SilentIntergenicRegion 0 19.17 28.75 19.43 45.87 35.90 26.03 9.05 27.01 46.80 37.06 3.09 3.47 4.86 5.42 5.73 7.96 5.86 18.03 33.34 16.61 15.05 8.13 14.27 31 IG14_AR3 ActiveIntergenicRegion 0 27.88 36.43 13.02 44.27 41.27 22.54 4.73 33.18 46.57 38.91 2.50 4.55 2.51 2.73 8.37 8.35 2.67 13.58 23.42 16.21 11.17 13.86 15.91 32 IG14_AR5 ActiveIntergenicRegion 0 2.96 9.47 2.55 0.00 1.25 9.82 1.85 4.80 2.14 5.29 21.16 0.00 4.37 7.28 2.38 13.52 23.72 15.20 0.74 7.43 5.65 3.40 12.31