Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC025449.1 Gene 0 8.39 28.82 10.78 26.13 14.52 20.69 29.98 22.41 54.57 16.02 38.86 82.83 80.05 31.79 8.89 23.99 26.33 22.67 15.52 52.98 21.27 29.75 29.84 2 399674 Transcript 0 7.03 24.66 10.17 23.37 12.03 16.84 26.24 19.97 49.06 14.93 37.09 66.81 71.98 30.62 9.70 24.53 22.42 20.16 14.83 46.78 21.48 28.07 28.80 3 IG27_SR4 SilentIntergenicRegion 0 9.52 13.22 4.57 8.12 21.41 11.92 17.21 14.17 5.52 11.11 1.93 19.99 4.28 3.92 4.52 7.43 4.95 2.30 9.56 8.49 1.10 2.08 4.40 4 IG27_AR3 ActiveIntergenicRegion 0 24.55 31.68 22.97 33.26 47.20 23.45 28.79 27.23 21.05 24.98 12.32 9.25 8.09 4.44 12.29 9.47 8.45 12.93 20.85 32.38 5.27 9.85 8.48 5 ER1a ExonRegion 0 5.51 9.62 3.37 11.93 5.78 2.26 8.73 7.36 11.88 6.39 16.63 16.73 25.01 22.78 1.29 15.15 11.29 12.14 18.60 21.70 10.01 17.39 24.76 6 E1a_E2a KnownJunction 0 7.11 14.60 7.81 22.08 3.57 14.48 9.54 14.75 30.99 6.88 17.11 6.30 13.64 16.60 0.00 19.31 4.68 18.49 33.51 27.61 5.81 14.88 23.65 7 E2_Aa NovelBoundary 0 3.48 16.18 2.51 9.36 7.30 2.33 10.38 2.18 8.48 0.00 0.00 25.21 26.95 0.00 0.00 0.00 4.11 3.48 4.61 0.00 0.00 0.00 4.18 8 ER2a ExonRegion 0 4.04 17.08 12.87 20.83 18.32 8.66 16.90 21.54 28.29 9.18 31.34 36.37 26.44 20.96 2.88 13.85 9.80 9.03 13.38 29.00 6.73 14.50 12.15 9 E2_Da NovelBoundary 0 6.82 15.46 4.38 8.62 3.31 4.20 8.17 12.98 20.05 8.03 6.37 10.80 20.62 8.59 10.75 16.58 0.00 4.60 0.00 22.43 8.22 13.59 0.00 10 E2a_E3a KnownJunction 0 0.00 0.00 13.81 11.52 0.00 0.00 0.00 9.98 24.02 6.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.73 4.80 0.00 0.00 0.00 0.00 11 ER3a ExonRegion 0 5.44 32.28 13.86 20.85 7.11 11.22 14.04 17.55 40.79 9.25 36.20 62.78 52.71 24.08 7.32 12.95 15.61 13.33 12.59 28.30 12.07 22.36 13.84 12 E3a_E4a KnownJunction 0 16.74 41.77 17.92 23.81 16.21 0.00 28.93 26.12 57.73 13.27 44.59 87.63 71.91 48.86 5.19 46.14 13.00 18.32 8.56 34.26 24.53 35.21 27.66 13 ER4a ExonRegion 0 9.58 41.63 12.02 25.40 11.13 8.27 25.74 19.53 49.63 11.67 39.66 91.51 55.27 36.95 6.62 23.99 24.51 14.31 14.45 42.39 19.40 32.91 28.21 14 E4a_E5a KnownJunction 0 7.11 50.65 9.46 30.70 16.81 7.50 40.28 29.90 44.47 19.90 41.91 44.41 52.92 50.09 4.70 31.10 16.27 5.55 8.09 63.21 44.97 28.17 20.15 15 E4a_E6a NovelJunction 0 3.63 2.96 1.24 11.22 0.00 0.00 3.49 2.46 9.58 4.35 13.00 6.30 6.82 7.65 4.33 3.85 8.88 7.01 8.56 8.44 0.00 6.25 3.33 16 E5_Aa NovelBoundary 0 14.22 3.16 3.25 6.49 7.89 0.00 0.00 5.46 4.69 2.93 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 8.69 0.00 0.00 0.00 17 ER5a ExonRegion 0 7.02 31.13 8.04 24.51 9.70 15.90 26.60 21.57 44.74 14.25 41.33 84.53 55.80 29.23 7.05 22.44 31.62 22.74 28.52 53.49 17.11 35.63 40.02 18 E5_Da NovelBoundary 0 0.00 18.55 6.59 14.48 0.00 2.90 17.58 19.18 10.56 3.06 2.26 0.00 0.00 7.53 0.00 0.00 0.00 6.14 0.00 6.39 5.50 0.00 3.93 19 E5a_E6a KnownJunction 0 7.56 12.04 12.54 24.94 0.00 5.05 7.82 14.79 60.56 10.96 50.49 81.63 99.99 15.66 5.19 26.83 28.99 15.59 13.93 43.66 29.41 39.50 42.94 20 E6_Aa NovelBoundary 0 11.19 26.64 8.90 23.24 6.45 11.58 26.14 34.30 32.67 11.15 0.00 0.00 6.33 0.00 4.45 0.00 8.98 2.53 0.00 23.33 0.00 0.00 3.33 21 ER6a ExonRegion 0 20.10 52.54 18.64 45.11 23.42 23.68 47.06 36.67 73.52 21.12 48.10 82.37 99.54 40.53 11.48 32.84 32.36 24.86 30.45 69.52 21.42 36.89 36.79 22 E6a_E7a KnownJunction 0 10.96 35.65 15.46 34.69 0.00 9.88 39.13 35.20 85.30 21.54 53.22 86.88 159.73 52.80 10.88 35.12 35.53 18.99 30.68 55.42 16.74 67.23 38.50 23 ER7a ExonRegion 0 9.61 21.18 14.75 35.55 13.12 24.84 33.51 34.47 71.77 24.93 47.13 100.20 124.15 40.15 14.48 37.41 34.56 31.78 22.76 62.46 17.80 49.28 42.44 24 E7_Da NovelBoundary 0 3.04 15.00 7.48 19.71 0.00 18.23 3.75 36.76 22.14 10.93 0.00 7.65 0.00 0.00 0.00 3.50 0.00 3.81 4.14 20.45 0.00 0.00 7.68 25 E7a_E8a KnownJunction 0 3.78 8.55 9.79 16.28 7.47 28.11 15.06 16.63 44.96 22.54 63.81 83.43 128.08 46.27 9.64 40.59 30.48 30.55 13.18 54.27 34.97 28.53 31.93 26 I7 Intron 0 3.48 15.19 4.46 17.90 6.53 1.28 4.22 13.98 11.18 4.34 1.16 1.99 4.04 0.51 2.92 3.40 3.45 4.99 2.38 16.85 0.44 1.66 1.90 27 I7_SR1 SilentIntronRegion 0 3.49 15.24 4.47 17.96 6.55 1.28 4.23 14.02 11.22 4.35 1.16 2.00 4.05 0.52 2.93 3.41 3.46 5.01 2.39 16.89 0.44 1.67 1.91 28 E8_Aa NovelBoundary 0 3.78 29.73 7.63 24.44 17.32 2.90 7.55 9.20 8.88 3.04 0.00 0.00 0.00 2.47 0.00 0.00 4.77 4.39 0.00 21.41 0.00 0.00 0.00 29 ER8a ExonRegion 0 15.42 27.05 9.05 31.18 19.91 17.61 25.68 23.04 51.96 23.52 51.65 63.00 119.71 37.97 14.73 38.43 40.95 21.89 14.87 60.28 24.85 39.58 40.90 30 E8a_E9a KnownJunction 0 3.48 11.38 1.60 19.74 4.24 8.23 14.71 11.17 40.80 15.28 35.22 44.11 74.83 25.84 8.90 11.62 17.20 4.81 0.00 3.13 11.92 14.39 14.60 31 I8_AR1 ActiveIntronRegion 0 0.00 8.31 4.90 12.27 19.12 0.05 12.97 12.25 11.92 2.06 0.00 10.06 10.21 1.48 0.00 0.00 0.00 2.77 3.93 21.03 0.00 1.72 6.13 32 E9_Aa NovelBoundary 0 0.00 16.44 11.18 25.11 15.03 7.72 10.60 15.24 7.52 8.17 0.00 18.76 21.10 0.00 4.45 8.37 8.04 3.52 4.80 27.68 2.84 2.33 8.19 33 ER9a ExonRegion 0 7.43 31.50 9.15 27.95 15.96 22.34 36.72 22.81 73.61 17.52 52.27 77.17 134.30 30.36 11.19 31.90 35.29 32.03 13.57 65.51 17.04 26.17 33.70 34 E9a_E10a KnownJunction 0 3.19 29.53 6.00 22.27 27.33 13.23 64.52 13.43 61.89 15.15 55.86 110.14 158.76 45.26 18.54 25.63 47.12 23.75 21.74 78.81 48.31 23.88 50.88 35 ER10a ExonRegion 0 6.28 36.97 15.15 37.65 21.85 23.36 40.70 20.00 69.37 15.93 47.14 111.01 129.76 43.35 9.32 31.84 34.37 31.47 16.44 71.96 38.98 27.86 44.95 36 E10a_E11a KnownJunction 1 6.67 40.98 14.99 32.06 16.81 25.27 70.48 19.02 73.38 16.44 46.49 130.24 248.36 51.74 13.35 22.39 26.65 17.12 22.02 79.13 32.12 31.90 51.47 37 E11_Aa NovelBoundary 0 2.82 3.35 1.83 16.58 3.74 0.00 7.86 2.55 11.05 4.46 2.21 6.30 47.24 0.00 0.00 0.00 8.88 4.60 0.00 14.70 0.00 8.14 4.35 38 ER11a ExonRegion 0 8.59 24.50 11.41 27.82 13.48 21.96 35.84 21.30 58.90 16.14 32.51 114.30 101.09 31.96 6.01 14.18 23.23 13.21 9.65 54.70 16.12 27.59 22.76 39 E11_Da NovelBoundary 0 0.00 3.35 8.63 10.55 3.82 0.00 1.94 9.78 18.72 3.87 0.00 12.60 6.82 4.83 5.07 7.35 0.00 1.78 4.14 17.96 0.00 8.27 6.83 40 E11a_E12a KnownJunction 0 8.67 32.76 2.93 27.07 22.07 24.53 33.12 10.56 52.55 23.32 40.85 89.58 58.44 40.26 9.27 26.83 22.16 13.64 4.42 51.26 17.48 43.48 18.95 41 ER12a ExonRegion 0 5.04 31.71 8.34 27.99 19.40 31.35 34.29 22.41 62.45 17.06 45.79 96.26 62.63 29.61 8.15 16.98 26.98 16.10 14.68 58.81 13.77 34.75 22.37 42 E12a_E13a KnownJunction 0 13.63 15.13 12.18 37.02 22.33 27.37 26.10 21.65 56.77 17.06 73.65 103.23 80.84 36.55 22.99 8.37 35.16 14.72 19.11 89.04 14.52 36.74 7.68 43 ER13a ExonRegion 0 6.11 18.73 19.58 33.15 21.24 52.05 29.86 27.36 62.23 20.57 42.57 116.25 59.41 33.55 12.25 24.88 33.74 19.78 9.40 74.91 9.55 41.75 29.22 44 E13a_E14a KnownJunction 0 3.63 30.65 33.00 37.39 21.65 52.19 35.07 42.31 90.39 22.73 43.22 89.28 58.60 24.43 14.09 44.18 16.92 37.47 4.42 54.46 12.17 28.29 24.67 45 ER14a ExonRegion 0 10.33 20.62 10.86 19.04 18.73 23.88 33.99 21.73 56.78 18.39 35.64 93.12 70.63 26.20 10.81 30.82 23.73 43.71 18.36 64.15 19.05 36.34 21.41 46 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 E15a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 ER15a ExonRegion 0 0.00 0.00 0.00 0.45 0.00 0.00 0.88 0.58 5.97 2.48 0.00 4.33 0.00 0.54 0.00 2.48 0.00 3.08 1.06 1.42 3.31 3.13 0.00 49 I15_AR1 ActiveIntronRegion 0 28.53 18.38 13.70 18.97 16.39 5.62 12.37 18.94 16.06 6.02 0.89 1.09 8.79 0.61 12.26 2.73 2.02 8.58 5.85 7.17 3.04 1.28 4.05 50 I15_AR2 ActiveIntronRegion 0 24.62 16.38 0.00 0.00 9.58 9.84 2.37 0.00 0.00 0.00 0.00 3.19 0.00 0.00 2.14 7.98 0.00 0.00 0.00 0.00 0.00 0.00 2.63 51 I15_SR4 SilentIntronRegion 0 6.16 11.37 2.59 9.03 4.22 5.05 14.33 19.81 12.32 5.63 2.78 9.94 8.36 1.92 8.22 24.23 9.06 25.18 8.13 11.87 3.64 9.06 15.32 52 E16_Aa NovelBoundary 0 9.93 26.51 11.41 29.80 4.33 22.94 25.61 28.51 57.87 33.60 31.90 50.72 35.06 26.43 13.97 22.30 17.67 39.42 20.89 67.18 67.03 23.21 16.05 53 ER16a ExonRegion 0 11.70 37.24 5.25 25.13 13.27 25.66 25.69 28.17 46.95 19.19 39.47 66.22 57.35 34.22 12.15 39.38 30.01 57.45 24.42 55.18 45.44 29.86 37.33 54 E16_Da NovelBoundary 0 3.78 12.43 3.37 9.39 0.00 0.00 14.22 19.55 7.38 3.01 2.00 0.00 0.00 0.00 4.45 7.01 8.51 4.27 13.84 5.75 0.00 3.06 4.35 55 E16a_E17a KnownJunction 0 3.56 0.00 1.83 12.25 8.57 16.24 27.38 14.33 39.44 18.48 22.64 64.97 46.91 33.96 17.80 34.95 17.77 26.12 11.95 36.30 31.01 41.52 55.91 56 ER17a ExonRegion 0 5.75 23.01 9.42 13.23 8.69 19.36 19.83 21.38 46.22 15.62 40.50 38.10 35.08 32.06 12.64 26.65 28.92 24.88 15.98 37.36 42.34 26.36 41.72 57 E17a_E18a KnownJunction 0 9.63 53.87 10.11 23.47 4.33 4.66 29.37 32.57 60.62 19.29 39.33 19.66 19.64 46.56 41.04 45.37 21.88 37.64 27.86 75.23 64.19 25.96 70.51 58 ER18a ExonRegion 0 2.47 28.89 4.66 15.00 8.55 20.12 20.74 19.20 38.00 10.03 21.78 42.64 37.88 22.42 9.40 23.89 14.08 26.19 15.42 40.28 28.59 20.28 35.88