Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC138951.5 Gene 0 30.84 22.57 64.85 103.38 24.01 17.61 26.64 38.03 45.74 84.36 31.99 14.06 13.16 35.65 23.39 33.84 33.92 119.33 51.03 64.06 29.76 9.45 37.41 2 412372 Transcript 0 0.71 2.96 2.11 0.45 1.49 4.50 3.75 2.00 4.37 2.59 4.19 0.40 0.00 2.27 3.32 4.57 1.42 8.99 0.71 2.42 1.40 0.00 1.03 3 328346 Transcript 0 26.60 16.50 69.31 113.37 19.95 10.85 20.24 39.29 47.67 88.91 22.42 12.32 12.94 30.86 18.52 33.63 32.82 121.37 51.47 69.95 28.29 10.51 39.06 4 429624 Transcript 0 1.61 8.04 5.20 9.28 2.51 5.91 4.70 2.95 6.92 7.13 5.50 1.36 0.73 17.07 10.69 7.39 6.89 17.44 6.67 8.50 2.09 0.40 2.79 5 ER1a ExonRegion 1 27.68 33.43 11.73 18.33 29.15 44.27 44.06 14.01 11.06 16.97 45.01 0.00 0.00 31.28 37.96 33.12 19.65 30.48 31.58 12.24 19.92 11.83 18.01 6 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 0 8.75 9.92 22.08 11.27 9.41 3.25 8.69 17.02 25.54 22.10 23.17 0.00 0.00 3.81 10.02 5.76 20.51 54.68 10.96 4.71 19.53 3.60 11.57 8 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER3a ExonRegion 1 3.70 6.03 21.56 15.84 9.68 7.42 5.53 25.12 30.61 28.73 62.15 6.49 10.50 57.46 28.15 36.90 50.50 53.96 23.74 30.93 31.51 14.61 21.71 10 E3_Da NovelBoundary 0 0.00 0.00 15.79 11.55 3.65 0.00 2.25 7.23 6.08 1.42 0.00 0.00 6.01 2.47 0.00 19.57 0.00 26.24 4.52 12.66 0.00 0.00 4.35 11 E3a_E4a KnownJunction 0 0.00 0.00 1.63 0.00 0.00 11.36 6.76 0.00 6.54 4.19 6.95 0.00 0.00 2.47 4.45 7.95 0.00 14.38 0.00 3.20 3.15 0.00 0.00 12 E3a_E6a KnownJunction 0 0.00 6.71 17.15 14.62 3.82 0.00 2.16 21.73 30.67 18.91 6.58 0.00 6.82 9.54 8.90 41.44 25.53 52.85 8.94 26.01 11.12 13.72 28.60 13 E3a_E7a NovelJunction 0 0.00 6.31 0.00 10.69 0.00 0.00 2.25 0.00 9.35 10.77 2.68 0.00 0.00 0.00 0.00 7.78 4.58 16.37 17.69 11.76 0.00 3.12 4.27 14 E3a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.49 11.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 I3_AR1 ActiveIntronRegion 0 0.00 0.00 0.00 0.00 1.62 1.11 2.41 0.00 1.12 0.00 1.17 2.16 2.35 0.81 3.94 0.00 2.00 2.79 0.00 2.58 0.00 1.26 12.48 16 I3_AR3 ActiveIntronRegion 0 9.96 18.93 10.80 14.20 11.21 7.82 14.56 17.74 16.80 13.50 15.07 8.06 7.78 10.56 17.28 16.94 9.68 23.68 9.69 33.19 5.31 3.25 11.45 17 E4_Aa NovelBoundary 0 6.08 50.12 8.75 19.68 15.03 0.00 27.07 22.92 23.47 17.41 7.21 6.30 13.47 17.01 14.09 16.41 0.00 19.32 4.42 28.76 0.00 0.00 12.55 18 ER4a ExonRegion 0 2.12 8.80 4.69 1.35 4.46 2.15 4.49 6.00 5.87 3.59 5.63 1.19 0.00 3.27 3.98 5.75 1.83 12.58 2.14 4.07 1.05 0.00 2.96 19 E4_Da NovelBoundary 0 10.30 36.64 16.03 18.65 3.82 7.67 33.21 21.40 19.91 9.05 14.53 6.15 19.48 7.24 18.67 14.87 0.00 19.57 27.01 46.47 5.99 0.00 18.69 20 ER5a ExonRegion 0 0.00 0.09 0.00 0.00 0.00 0.00 0.00 0.00 0.70 0.00 0.00 0.00 0.00 1.06 1.51 0.00 2.44 0.00 0.00 0.00 0.00 0.00 0.13 21 I5_AR1 ActiveIntronRegion 0 6.23 14.04 13.95 14.66 12.50 8.05 9.49 15.61 10.21 12.93 4.83 5.70 4.26 3.59 2.92 4.16 3.85 17.74 9.05 25.82 1.10 3.71 3.34 22 I5_SR1 SilentIntronRegion 0 3.67 13.49 14.79 16.86 12.20 2.74 15.31 14.84 12.90 13.27 6.65 11.08 7.26 3.41 10.54 8.57 7.49 21.25 9.20 27.53 2.53 5.08 5.59 23 I5_AR2 ActiveIntronRegion 0 3.11 6.48 4.48 2.82 6.62 4.57 4.53 3.78 3.27 3.97 9.39 0.41 1.96 6.57 9.57 4.00 3.71 3.98 3.74 6.63 1.73 2.34 3.59 24 I5_SR2 SilentIntronRegion 0 1.77 5.63 10.34 15.40 7.97 1.45 12.78 9.33 17.64 16.08 0.00 3.93 5.24 3.36 8.10 0.00 3.30 1.85 1.48 15.59 0.00 6.11 12.36 25 I5_SR3 SilentIntronRegion 0 4.42 16.85 3.51 8.88 35.72 7.93 19.73 15.41 14.13 12.95 1.09 4.70 4.90 2.74 6.84 1.13 0.63 1.73 2.70 14.25 1.25 5.88 2.68 26 I5_SR1 SilentIntronRegion 0 12.04 17.64 11.68 41.38 9.28 3.51 8.27 7.29 17.57 14.60 1.61 1.71 1.39 1.20 3.28 2.18 2.46 2.98 1.02 4.63 0.70 0.22 3.42 27 ER6a ExonRegion 0 98.25 57.37 181.96 324.83 70.30 40.43 71.40 111.23 130.03 270.19 56.19 38.64 33.23 85.35 52.47 77.12 73.66 338.76 141.21 190.13 81.71 19.99 101.20 28 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 I6 Intron 0 0.65 1.24 15.95 20.84 0.00 0.00 0.94 8.64 8.41 14.41 0.00 0.88 0.95 0.27 2.08 1.81 2.01 8.68 3.56 7.78 0.90 0.00 3.58 30 I6_SR1 SilentIntronRegion 0 0.65 1.24 15.99 20.88 0.00 0.00 0.94 8.65 8.43 14.44 0.00 0.88 0.95 0.27 2.08 1.82 2.02 8.69 3.57 7.80 0.90 0.00 3.59 31 ER7a ExonRegion 0 28.83 20.55 147.30 247.15 27.39 13.35 25.06 71.88 87.55 173.52 46.82 9.17 12.30 62.08 37.61 50.49 68.89 218.01 115.76 147.11 55.92 22.43 60.18 32 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER8a ExonRegion 0 32.54 14.37 69.42 93.64 18.20 11.32 22.80 30.89 37.76 70.83 24.93 26.13 25.31 28.20 12.11 32.72 28.83 118.60 42.92 56.48 20.96 6.90 44.37 34 E8_Da NovelBoundary 0 627.59 297.64 216.55 650.27 179.63 43.95 295.45 176.17 222.08 263.68 31.85 6.75 19.80 42.73 20.52 132.53 118.84 553.49 757.67 188.62 126.64 22.66 199.32 35 I8 Intron 0 3.17 41.18 1.64 7.01 8.43 7.70 1.19 2.32 10.22 11.02 0.00 0.00 1.74 1.83 3.92 0.00 0.00 1.38 0.00 1.91 0.33 0.94 1.32 36 I8_SR1 SilentIntronRegion 0 3.18 41.30 1.64 7.02 8.45 7.72 1.20 2.33 10.25 11.06 0.00 0.00 1.74 1.84 3.93 0.00 0.00 1.38 0.00 1.92 0.33 0.94 1.33 37 E9_Aa NovelBoundary 0 7.33 53.74 13.45 23.34 34.97 36.80 0.00 1.89 19.65 18.80 0.00 0.00 0.00 4.77 25.22 0.00 9.54 0.00 0.00 6.52 5.44 0.00 0.00 38 ER9a ExonRegion 0 3.22 16.07 10.40 18.55 5.01 11.81 9.40 5.91 13.84 14.26 10.99 2.71 1.47 9.65 10.13 14.77 13.77 34.89 13.34 17.01 4.18 0.81 5.59 39 IG12_AR10 ActiveIntergenicRegion 0 4.91 25.49 4.56 6.65 12.86 13.78 5.98 8.71 19.15 12.94 2.30 7.80 9.10 1.12 1.31 2.87 2.70 2.29 1.32 4.45 0.97 2.41 1.99 40 IG12_AR14 ActiveIntergenicRegion 0 5.76 10.73 4.56 4.76 4.74 10.48 3.68 4.76 16.06 5.00 6.85 2.89 3.88 3.86 0.68 2.32 2.29 6.64 9.93 6.33 4.76 4.51 5.47 41 IG12_AR15 ActiveIntergenicRegion 0 10.19 20.93 14.36 20.73 14.38 14.51 4.69 9.47 28.10 9.10 7.45 9.59 4.92 2.30 0.77 2.22 2.16 1.61 5.54 9.41 1.57 5.18 4.08