Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 EGFLAM Gene 0 17.78 107.40 20.89 14.46 15.15 21.89 6.08 18.92 67.39 114.37 0.02 0.18 0.18 0.03 0.02 0.00 0.00 258.14 8.69 4.14 37.58 42.07 19.95 2 354891 Transcript 0 0.00 115.11 0.00 6.49 0.00 2.10 0.00 6.61 41.00 100.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 169.05 13.65 9.14 0.00 0.00 0.00 3 339580 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 322350 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 336740 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 397202 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 397210 Transcript 0 38.62 36.90 3.76 2.03 11.01 11.31 5.69 9.24 19.28 19.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 76.93 1.73 1.35 17.04 10.18 4.95 8 ER1a ExonRegion 0 0.00 1.63 0.00 0.00 0.00 0.00 0.00 0.00 0.37 2.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.90 0.00 0.00 0.00 1.06 0.00 9 E1_Ab KnownBoundary 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 0.00 4.34 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.50 0.00 0.00 0.00 0.00 0.00 10 ER1b ExonRegion 0 0.69 12.38 4.99 0.69 0.00 8.05 1.18 5.29 14.13 29.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 123.70 2.84 1.66 16.41 10.45 10.59 11 E1a_E2a KnownJunction 0 0.00 15.59 9.96 3.16 0.00 5.28 2.21 11.71 36.26 62.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 193.88 8.66 0.00 21.87 24.92 14.77 12 ER2a ExonRegion 0 3.52 32.57 5.81 5.97 3.09 21.69 1.82 9.13 45.07 78.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 280.62 6.69 3.95 32.05 29.09 13.99 13 E2a_E3a KnownJunction 0 3.63 53.21 10.64 10.52 12.73 41.40 4.02 9.98 54.72 118.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 419.47 3.76 6.52 36.94 50.89 27.15 14 ER3a ExonRegion 0 0.45 45.92 14.84 6.51 4.36 18.40 3.61 11.77 68.23 112.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 405.16 6.48 7.29 39.01 51.39 30.83 15 E3a_E4a KnownJunction 0 0.00 50.58 13.72 9.76 7.22 30.55 9.89 11.09 86.25 110.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 422.95 8.38 5.43 38.92 51.68 20.66 16 ER4a ExonRegion 0 0.20 48.82 13.88 11.94 6.62 20.11 4.85 9.71 69.96 116.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 419.16 15.01 6.73 42.06 47.00 25.41 17 E4a_E5a KnownJunction 0 3.11 32.89 15.35 7.16 0.00 26.75 6.23 20.74 69.13 110.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 462.91 16.85 9.08 43.68 57.74 19.04 18 ER5a ExonRegion 0 2.52 62.38 16.15 11.30 1.00 19.59 5.09 12.52 90.67 120.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 337.23 13.47 5.87 51.71 44.95 31.63 19 E5a_E6a KnownJunction 0 6.08 84.85 12.33 10.59 0.00 47.47 1.81 15.32 77.52 115.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 414.91 11.95 0.00 28.66 50.70 43.36 20 ER6a ExonRegion 0 1.84 64.21 15.81 11.85 8.25 26.51 7.49 16.06 81.54 124.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 381.70 8.16 8.68 42.29 39.60 27.54 21 E6a_E8a KnownJunction 0 3.19 55.06 13.78 15.05 0.00 17.77 4.24 13.27 76.21 114.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 453.33 12.89 5.69 40.53 57.25 32.52 22 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER7b ExonRegion 0 0.63 3.95 0.00 0.60 0.00 0.00 1.18 0.00 3.25 3.81 0.00 1.73 1.15 0.20 0.36 0.00 0.00 11.70 0.00 0.32 0.00 0.00 0.48 24 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E7a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER8a ExonRegion 0 4.43 77.49 13.68 10.88 1.87 13.64 5.54 16.15 76.72 133.87 0.00 1.57 0.00 0.00 0.00 0.00 0.00 279.50 8.29 7.36 35.94 49.99 31.54 27 E8a_E9a KnownJunction 0 0.00 104.13 15.35 7.76 8.23 21.52 9.01 15.98 63.31 145.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 239.14 8.38 3.26 40.53 50.70 27.91 28 ER9a ExonRegion 0 3.78 85.28 11.51 10.59 6.37 24.39 5.17 15.53 77.01 133.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 328.63 7.89 3.25 44.52 46.38 28.31 29 E9a_E10a KnownJunction 0 13.63 160.10 3.81 7.26 3.99 24.30 2.25 6.20 65.94 94.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 318.07 20.05 0.00 39.48 39.07 12.12 30 ER10a ExonRegion 0 1.95 142.51 14.35 8.83 21.27 37.47 8.60 8.16 71.92 105.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 318.12 11.10 6.40 47.78 52.64 29.08 31 E10a_E11a KnownJunction 0 0.00 103.34 6.12 11.82 36.42 13.23 13.07 12.86 77.75 100.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 264.89 4.71 5.62 37.62 40.17 32.01 32 ER11a ExonRegion 0 2.14 85.27 17.86 14.07 10.91 16.96 6.17 12.48 68.46 117.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 299.13 23.72 6.24 44.21 43.20 27.74 33 E11a_E12a KnownJunction 0 0.00 126.49 33.59 17.98 7.81 13.57 6.76 15.07 84.75 155.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 363.13 22.68 10.61 66.84 44.70 23.05 34 ER12a ExonRegion 0 5.52 118.12 21.36 12.05 17.24 11.69 4.93 13.30 81.47 154.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 338.35 18.41 3.11 63.83 41.00 24.26 35 E12_Da NovelBoundary 0 0.00 52.16 0.00 5.03 0.00 0.00 7.82 0.00 22.95 11.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66.16 3.76 2.68 2.47 3.12 3.59 36 E12a_E13a KnownJunction 0 14.89 218.84 31.31 13.52 38.96 30.66 18.46 15.90 90.94 155.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 319.77 36.99 9.01 75.80 75.32 30.65 37 E12a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 I12 Intron 0 0.49 50.28 1.05 4.75 1.65 1.32 1.32 2.24 9.70 10.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35.90 2.10 1.04 0.94 1.81 0.44 39 I12_SR1 SilentIntronRegion 0 0.49 50.32 1.05 4.75 1.65 1.33 1.32 2.25 9.70 10.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35.93 2.10 1.04 0.94 1.82 0.44 40 E13_Aa NovelBoundary 0 3.33 80.71 1.77 6.89 0.00 0.00 0.00 7.48 16.98 12.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54.39 0.00 0.00 3.03 0.00 8.28 41 ER13a ExonRegion 0 2.40 116.38 22.95 14.54 10.93 18.78 8.12 16.60 80.74 145.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 310.33 18.48 3.47 54.12 56.31 24.87 42 E13_Da NovelBoundary 0 0.00 29.21 0.00 1.70 0.00 0.00 4.33 1.93 20.02 19.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53.52 0.00 0.00 0.00 0.00 4.35 43 E13a_E14a KnownJunction 0 6.96 70.84 24.42 24.67 3.40 8.69 1.63 22.43 78.79 139.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 406.70 11.86 0.00 49.11 64.36 40.72 44 I13 Intron 0 0.43 27.14 0.53 2.75 1.16 1.41 1.06 1.24 10.88 10.47 0.00 0.00 0.00 0.03 0.00 0.00 0.00 43.00 1.07 1.07 1.82 2.40 2.22 45 I13_SR1 SilentIntronRegion 0 0.43 27.15 0.53 2.75 1.16 1.41 1.06 1.24 10.88 10.48 0.00 0.00 0.00 0.03 0.00 0.00 0.00 43.02 1.07 1.07 1.82 2.40 2.22 46 ER14a ExonRegion 0 2.54 109.83 20.68 19.22 9.13 11.98 5.76 23.07 95.03 157.90 0.00 0.00 1.56 0.00 0.00 0.00 0.00 496.36 31.32 3.99 64.24 56.52 30.51 47 E14a_E15a KnownJunction 0 6.82 163.33 23.83 24.51 15.37 25.27 2.25 23.95 69.56 143.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 411.34 18.17 5.18 48.37 19.29 18.18 48 ER15a ExonRegion 0 4.59 118.44 23.83 16.82 13.74 20.86 5.91 17.84 75.31 134.66 0.40 0.75 0.00 0.28 0.00 0.00 0.00 406.77 17.10 4.79 51.71 46.00 25.66 49 E15a_E16a KnownJunction 0 0.00 92.62 20.58 16.35 11.12 15.84 5.52 12.61 66.38 99.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 302.53 12.05 3.26 35.52 32.76 23.39 50 ER16a ExonRegion 0 4.23 104.84 30.11 20.61 19.40 27.97 6.29 19.31 79.69 147.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 411.54 16.61 4.45 42.46 51.44 29.58 51 E16a_E17a KnownJunction 0 3.63 202.60 45.15 22.87 23.77 35.04 8.79 34.58 108.19 206.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 481.36 17.88 9.40 60.60 79.79 50.96 52 ER17a ExonRegion 0 3.74 159.47 28.23 19.20 12.17 30.52 5.16 22.69 93.87 150.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 425.01 13.94 4.91 49.69 55.85 31.80 53 E17a_E18a KnownJunction 0 6.82 157.74 29.48 27.27 7.64 30.49 1.81 24.07 101.45 176.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 473.90 25.51 2.88 58.81 55.91 44.73 54 ER18a ExonRegion 0 1.73 123.82 27.10 17.62 7.94 24.58 4.50 21.53 77.93 148.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 321.12 10.00 8.82 51.00 37.79 22.91 55 E18_Da NovelBoundary 0 0.00 9.21 1.48 1.56 0.00 2.67 0.00 2.55 20.49 15.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 89.83 0.00 0.00 3.15 0.00 4.35 56 E18a_E19b KnownJunction 0 0.00 115.11 0.00 6.49 0.00 2.10 0.00 6.61 41.00 100.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 169.05 13.65 9.14 0.00 0.00 0.00 57 E18a_E20a KnownJunction 0 3.48 5.33 31.81 8.96 16.81 43.50 4.15 17.74 24.28 23.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34.24 0.00 0.00 48.68 50.33 34.83 58 I18 Intron 0 0.70 33.01 0.71 2.57 1.59 1.03 1.03 1.56 19.23 20.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64.50 1.75 1.38 1.61 2.28 1.71 59 I18_SR1 SilentIntronRegion 0 0.71 33.08 0.71 2.61 1.61 1.04 1.03 1.58 19.35 20.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64.45 1.75 1.40 1.61 2.24 1.70 60 I18_AR1 ActiveIntronRegion 0 0.00 28.36 0.71 0.00 0.00 0.00 1.18 0.00 10.68 21.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70.28 1.40 0.00 1.35 5.45 2.89 61 E19_Aa NovelBoundary 0 3.78 19.01 6.12 3.33 0.00 0.00 0.00 3.82 29.40 51.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 170.95 7.15 0.00 5.50 7.53 0.00 62 ER19a ExonRegion 0 73.82 59.28 5.16 3.38 17.76 19.82 10.17 16.87 32.10 34.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 133.39 3.47 2.23 33.10 16.95 8.91 63 E19a_E20a KnownJunction 0 13.34 206.81 5.06 10.29 3.57 21.86 0.00 16.10 90.60 152.58 0.00 0.00 6.66 0.00 0.00 0.00 0.00 296.10 14.02 0.00 83.46 8.39 3.50 64 ER19b ExonRegion 0 8.56 195.40 4.05 12.09 1.75 25.59 0.06 15.41 88.39 185.20 0.00 0.00 2.04 0.00 0.00 0.00 0.00 278.77 17.87 6.75 48.67 6.34 2.04 65 I19_AR2 ActiveIntronRegion 0 2.12 29.76 2.76 0.00 0.00 0.00 0.00 1.06 6.65 7.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.97 0.00 0.00 1.90 0.00 0.00 66 E20_Aa NovelBoundary 0 2.96 49.93 4.70 6.43 4.33 4.60 0.00 2.42 17.22 16.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32.96 0.00 3.26 2.78 2.63 0.00 67 ER20a ExonRegion 0 12.27 194.27 29.30 20.65 19.85 35.68 9.87 46.82 106.85 190.12 0.00 0.00 1.90 0.00 0.00 0.00 0.00 345.90 12.26 6.09 77.13 61.79 33.57 68 E20a_E21a KnownJunction 0 18.82 219.11 25.69 27.87 31.66 38.56 26.23 58.74 105.50 218.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 358.61 4.14 13.93 66.04 59.64 38.16 69 ER21a ExonRegion 0 29.48 186.35 34.25 21.03 39.49 53.35 16.17 30.13 97.77 203.15 0.00 0.00 1.37 0.00 0.00 0.00 0.00 377.39 11.24 8.78 66.36 69.19 29.96 70 E21a_E22a KnownJunction 0 48.75 175.30 28.53 24.97 23.68 31.57 17.27 34.21 99.88 206.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 389.54 4.52 5.62 55.97 44.70 11.61 71 ER22a ExonRegion 0 68.43 194.21 31.68 32.53 14.02 55.49 6.51 19.26 106.12 197.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 393.75 8.95 1.42 71.99 62.56 34.61 72 E22a_E23a KnownJunction 0 93.42 246.67 60.20 37.16 16.72 42.25 10.73 22.88 116.17 217.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 351.44 13.74 5.75 67.96 98.03 23.90 73 E23_Aa NovelBoundary 0 23.63 12.17 0.00 0.00 0.00 0.00 4.50 0.00 7.99 7.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.46 0.00 0.00 0.00 3.12 0.00 74 ER23a ExonRegion 0 89.59 286.32 47.51 40.99 28.64 45.07 10.68 31.59 129.82 222.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 414.82 4.75 7.00 82.41 87.29 34.73 75 E23a_E24a KnownJunction 0 105.94 332.77 67.27 44.85 45.33 44.18 17.97 40.09 179.45 225.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 439.20 0.00 2.68 90.26 94.85 15.11 76 ER24a ExonRegion 0 66.32 271.25 64.96 40.71 48.75 47.33 12.60 53.12 145.98 234.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 416.04 9.38 7.54 65.09 94.93 31.22 77 E24_Da KnownBoundary 0 30.15 186.55 61.80 45.88 46.52 60.53 15.50 59.84 170.80 297.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 301.45 8.94 14.76 52.02 133.49 26.55 78 ER24b ExonRegion 0 36.70 188.81 43.99 28.21 30.04 31.24 9.15 45.29 110.87 194.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 229.93 10.89 5.28 35.85 70.85 18.40 79 E24_Db KnownBoundary 0 9.93 57.42 3.08 7.69 8.40 12.66 2.03 18.69 47.60 103.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 78.51 0.00 4.99 6.05 9.12 0.00 80 E24_Dc KnownBoundary 0 25.49 106.03 18.45 9.52 27.25 43.04 7.15 11.34 22.68 55.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 65.83 4.80 0.00 15.20 38.88 11.69 81 ER24c ExonRegion 0 60.67 226.41 25.32 19.08 53.51 55.01 14.56 31.11 83.58 155.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 168.76 6.37 4.26 33.79 75.70 12.73 82 ER24d ExonRegion 0 25.61 116.27 13.16 11.37 22.60 15.98 6.70 19.11 38.69 67.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66.67 2.45 1.19 8.81 30.74 8.31 83 E24_Dd KnownBoundary 0 9.63 17.96 3.31 0.00 3.90 10.90 4.37 2.55 12.18 7.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32.58 0.00 0.00 0.00 2.39 0.00 84 ER24e ExonRegion 0 3.42 14.51 2.35 0.68 4.26 2.79 1.21 1.60 6.46 3.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.47 0.00 0.47 0.98 3.41 0.98