Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SRD5A1 Gene 0 33.30 179.61 68.51 88.99 53.45 257.60 72.52 79.97 109.00 77.84 37.12 48.45 52.38 76.01 60.05 66.46 56.75 103.98 102.56 115.04 27.99 30.71 17.07 2 274192 Transcript 0 30.84 205.84 53.33 80.99 56.84 274.68 77.86 84.10 124.05 69.88 45.97 48.72 67.79 100.19 60.13 82.88 77.73 127.72 146.19 135.95 40.54 28.13 22.64 3 IG45 Intergenic 0 1.51 0.36 1.63 0.72 0.00 0.00 1.18 0.46 0.33 3.35 14.83 2.56 0.00 7.62 1.61 4.77 12.95 2.95 5.68 6.83 5.10 4.83 4.71 4 IG45_AR1 ActiveIntergenicRegion 0 1.52 0.37 1.64 0.73 0.00 0.00 1.19 0.46 0.33 3.38 14.93 2.56 0.00 7.67 1.62 4.80 13.04 2.97 5.72 6.88 5.14 4.86 4.74 5 ER1a ExonRegion 0 3.40 26.81 11.47 14.33 4.58 65.72 11.97 11.43 15.08 16.05 17.60 1.91 6.35 31.45 20.47 22.54 20.51 55.91 35.98 39.84 15.07 7.10 6.69 6 E1a_E2a KnownJunction 0 13.85 89.06 47.51 67.66 37.27 256.39 50.52 60.54 55.76 47.20 54.28 18.46 39.93 105.77 74.66 59.56 47.12 195.12 129.51 133.46 63.01 24.92 25.35 7 E1a_E3a NovelJunction 0 0.00 0.00 1.83 3.66 0.00 16.41 3.97 1.77 7.75 2.20 7.11 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.43 8 ER2a ExonRegion 0 10.87 118.92 45.98 65.22 26.15 181.70 52.13 75.59 103.29 61.56 44.06 27.45 55.89 94.45 52.03 84.18 78.89 138.33 120.47 156.63 44.39 23.83 26.99 9 E2_Da NovelBoundary 0 6.52 0.00 9.14 3.06 0.00 7.10 10.55 5.09 5.61 7.55 0.00 12.75 0.00 19.95 4.82 12.22 0.00 25.54 11.95 18.47 14.15 0.00 8.19 10 E2a_E3a KnownJunction 0 9.19 231.08 51.27 76.05 32.85 241.17 80.24 96.32 138.48 72.53 38.11 39.16 58.28 101.12 73.68 104.33 77.42 134.06 198.88 150.14 19.34 16.90 27.66 11 I2 Intron 0 5.72 11.26 3.39 6.78 8.37 12.93 13.54 6.46 8.06 7.71 6.61 9.20 16.36 14.32 4.96 10.50 10.05 11.09 7.42 10.60 6.10 2.95 3.78 12 I2_AR1 ActiveIntronRegion 0 4.13 5.63 2.68 5.34 9.96 8.07 11.22 8.27 6.29 6.00 5.06 8.89 25.61 11.53 3.28 13.62 13.58 9.60 10.48 10.28 9.72 5.02 6.41 13 I2_SR2 SilentIntronRegion 0 16.10 16.55 2.50 12.63 16.61 15.40 25.83 9.15 6.65 6.29 12.81 6.97 22.85 23.30 4.43 14.81 18.67 23.84 18.19 14.26 15.05 2.54 12.76 14 I2_AR2 ActiveIntronRegion 1 7.79 10.39 5.10 20.79 15.67 24.60 21.14 9.00 7.23 8.96 13.50 16.97 31.42 31.04 4.65 18.96 19.44 24.11 15.52 32.93 9.06 4.40 1.91 15 I2_SR3 SilentIntronRegion 0 5.50 12.76 3.74 7.16 7.88 14.65 14.37 6.90 9.02 9.43 6.63 11.53 17.11 14.62 5.63 9.11 9.44 10.23 5.72 9.88 4.85 2.60 2.56 16 E3_Aa NovelBoundary 0 17.34 12.56 3.67 8.86 19.95 47.36 23.63 11.67 13.69 10.37 10.06 12.60 0.00 11.83 4.45 3.93 13.28 15.38 0.00 0.00 8.03 5.88 4.35 17 ER3a ExonRegion 0 36.42 222.90 56.56 97.69 60.60 317.75 86.73 101.23 167.10 79.48 57.55 62.48 88.79 128.64 51.43 108.10 111.45 159.54 203.49 172.59 42.58 28.74 29.08 18 E3a_E4a KnownJunction 0 62.31 349.35 38.50 86.27 117.74 423.28 128.43 117.02 193.29 98.15 56.07 87.48 144.31 148.57 79.12 126.12 122.49 128.17 230.88 159.35 47.63 44.64 33.04 19 I3_AR3 ActiveIntronRegion 0 2.12 5.23 6.36 10.12 2.68 1.14 3.72 4.03 2.47 3.50 8.61 4.33 1.45 5.92 3.52 14.08 4.32 18.96 7.13 5.98 2.78 0.05 1.82 20 I3_AR4 ActiveIntronRegion 1 1.41 2.03 5.04 9.24 2.08 1.83 2.80 2.69 3.71 2.29 10.95 8.66 0.00 9.74 0.32 5.94 9.90 22.17 15.93 12.77 2.69 2.08 2.94 21 I3_AR5 ActiveIntronRegion 1 2.17 2.57 4.74 7.21 0.00 3.43 5.19 1.14 2.05 3.20 14.60 15.61 0.00 6.33 5.88 3.52 12.33 18.77 11.23 11.03 2.20 2.08 1.00 22 I3_AR6 ActiveIntronRegion 1 3.08 2.03 6.13 4.83 0.00 3.67 8.43 0.79 2.47 2.29 13.18 12.59 0.00 6.50 9.50 4.86 9.90 11.42 3.19 8.32 1.00 0.00 0.00 23 ER4a ExonRegion 0 35.00 244.54 56.43 88.32 74.78 303.48 108.17 94.60 135.95 70.63 50.56 62.13 66.53 112.80 59.31 94.54 89.45 112.10 132.50 135.61 48.32 28.37 24.10 24 E4a_E5a KnownJunction 0 59.34 334.15 76.67 113.11 84.72 351.05 89.12 96.32 168.75 78.84 54.70 72.92 84.57 95.89 53.40 71.52 91.91 112.92 148.71 143.43 56.84 37.60 12.63 25 ER5a ExonRegion 0 47.21 235.77 95.60 120.24 72.83 331.61 93.46 103.83 138.72 104.43 40.80 66.48 65.48 82.98 77.08 75.06 60.33 113.32 115.25 132.47 27.64 41.10 18.19 26 IG46_AR1 ActiveIntergenicRegion 0 2.33 19.01 3.26 7.99 9.01 47.11 27.01 25.74 52.92 19.90 5.92 13.67 25.05 21.08 6.89 11.34 13.66 52.32 40.25 59.68 9.13 18.94 14.86 27 IG46_AR2 ActiveIntergenicRegion 0 6.25 16.78 4.13 6.81 4.12 41.74 17.15 18.77 54.65 26.77 5.50 10.16 9.99 23.81 6.96 15.68 12.90 95.06 57.51 54.22 17.29 9.28 14.53 28 IG46_SR1 SilentIntergenicRegion 0 2.39 16.39 5.92 8.80 9.35 30.42 14.13 16.77 49.74 19.96 6.02 3.95 10.59 20.01 6.02 10.65 5.29 73.30 43.27 44.69 16.17 5.76 13.35 29 IG46_AR3 ActiveIntergenicRegion 0 5.48 32.20 8.34 15.15 13.04 36.85 13.30 22.74 50.16 11.97 4.71 5.43 4.24 14.05 7.09 13.57 10.55 45.33 45.10 36.60 12.41 13.00 12.07 30 IG46_SR2 SilentIntergenicRegion 0 1.53 9.72 0.00 9.31 17.84 20.38 8.02 10.27 11.94 6.31 0.00 1.92 2.61 4.51 2.90 5.45 6.79 15.30 8.67 8.16 5.26 9.14 0.00 31 IG46_AR4 ActiveIntergenicRegion 0 13.77 71.35 19.00 29.07 22.24 60.09 28.45 33.64 64.61 27.97 4.37 10.95 8.57 10.64 8.93 10.13 4.22 31.28 32.86 33.86 5.80 11.17 6.91 32 IG46_AR8 ActiveIntergenicRegion 0 0.00 4.65 1.23 0.00 2.68 3.67 6.24 5.43 1.24 2.29 13.81 4.33 0.00 32.95 7.05 35.24 20.28 25.87 10.01 10.03 25.81 7.14 17.62 33 IG46_SR7 SilentIntergenicRegion 0 2.92 13.14 1.06 0.00 4.81 10.36 4.19 6.45 0.92 1.92 25.39 3.98 2.28 38.63 7.53 31.57 32.74 25.24 19.76 17.68 32.19 15.09 20.52