Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NDUFS6 Gene 0 46.58 79.19 254.60 126.06 178.59 140.17 155.12 106.93 90.60 145.62 412.27 100.56 60.43 448.98 617.31 376.01 349.31 208.52 252.52 208.06 169.69 130.15 143.39 2 274137 Transcript 0 38.12 146.00 273.91 166.60 555.30 569.14 625.85 131.34 95.67 164.83 335.89 150.49 64.67 536.41 679.29 346.11 404.57 82.82 264.38 208.06 175.29 204.78 79.79 3 469176 Transcript 0 4.78 0.87 6.41 0.45 0.66 2.34 1.35 2.75 3.09 1.10 10.60 0.65 0.83 5.39 8.01 11.48 8.11 2.33 4.94 0.63 3.56 3.34 1.27 4 IG26_AR2 ActiveIntergenicRegion 0 4.23 5.29 6.13 4.45 7.76 11.55 3.31 1.90 8.48 4.43 3.87 5.92 5.78 7.15 7.45 6.34 13.09 7.45 8.49 3.69 4.19 0.00 0.00 5 IG26_AR3 ActiveIntergenicRegion 0 3.86 3.15 4.72 7.63 3.61 8.89 2.81 5.10 8.71 6.77 3.38 10.07 5.63 15.10 8.85 3.94 9.57 10.62 8.76 3.30 1.60 0.00 0.00 6 ER1a ExonRegion 0 0.00 5.23 0.23 0.00 3.06 2.36 2.21 1.32 0.29 0.00 3.04 0.00 0.00 8.20 73.77 1.84 2.36 0.26 1.06 0.00 2.73 3.27 2.94 7 ER1b ExonRegion 0 83.52 128.68 233.09 86.75 333.35 218.29 292.65 73.24 77.00 121.58 330.21 40.48 53.76 494.08 725.23 411.26 329.30 177.74 260.49 166.93 159.37 75.78 171.18 8 E1a_E2a KnownJunction 0 44.53 57.95 289.08 132.12 55.60 8.29 17.53 132.09 110.16 181.08 921.81 169.11 240.89 457.18 503.00 315.05 610.47 136.67 167.25 254.33 401.31 71.64 78.28 9 ER2a ExonRegion 1 29.32 90.64 494.07 235.65 44.99 33.28 28.56 244.00 205.01 339.12 1686.49 188.25 158.16 1156.13 1021.13 542.08 1338.33 386.04 483.29 545.23 623.85 194.92 164.56 10 E2a_E3a KnownJunction 1 37.04 161.75 729.93 376.58 87.44 57.01 54.85 332.62 274.10 462.11 1799.98 182.76 113.30 1661.97 2032.89 1098.60 1402.80 702.80 1123.04 887.81 507.87 369.48 418.62 11 I2 Intron 0 7.99 3.34 3.48 5.48 6.46 3.91 6.51 5.64 6.38 4.64 27.58 22.59 18.04 32.80 14.46 21.96 22.60 19.61 7.71 10.75 11.12 9.78 9.80 12 I2_AR1 ActiveIntronRegion 0 2.29 2.60 0.00 1.51 7.17 2.09 4.85 4.33 3.32 1.12 7.84 29.55 22.63 18.58 9.40 6.57 9.30 4.90 5.23 5.44 3.00 10.40 5.98 13 I2_SR1 SilentIntronRegion 1 2.12 4.07 0.00 3.50 10.70 0.00 1.32 17.28 6.18 1.15 19.05 113.18 33.50 28.77 8.29 11.89 7.07 8.71 9.56 9.12 2.20 14.58 11.75 14 I2_AR2 ActiveIntronRegion 1 1.90 3.66 0.00 3.82 10.70 1.47 2.12 17.28 6.18 1.15 17.40 131.18 41.27 31.67 6.96 15.46 13.53 9.61 9.56 12.77 2.20 11.46 12.63 15 I2_SR2 SilentIntronRegion 1 3.53 2.59 2.40 4.80 4.65 2.00 5.91 4.15 4.85 3.10 23.97 27.11 20.72 31.25 8.21 16.73 27.09 16.43 9.61 12.09 10.87 6.48 10.43 16 I2_SR3 SilentIntronRegion 0 3.57 1.46 2.03 5.11 3.89 3.95 3.70 4.29 6.26 5.07 32.12 12.93 19.05 36.10 10.34 19.01 25.00 27.35 6.56 11.03 16.15 5.47 12.27 17 I2_AR4 ActiveIntronRegion 0 4.62 1.97 2.36 2.39 1.60 3.49 5.40 2.63 6.23 2.95 29.14 7.91 19.86 35.64 12.12 19.98 23.07 22.68 6.40 9.83 12.35 8.29 11.09 18 I2_SR4 SilentIntronRegion 0 3.74 2.84 1.64 4.04 5.44 5.18 6.09 4.61 7.19 5.37 28.80 23.05 14.36 34.77 13.48 25.42 24.08 20.02 6.81 10.20 11.34 8.69 9.47 19 I2_AR5 ActiveIntronRegion 0 6.24 3.39 2.97 5.11 8.09 3.08 8.41 7.41 6.39 6.30 29.45 21.40 10.54 43.59 19.14 29.31 21.48 36.07 10.94 14.04 17.90 15.36 13.13 20 I2_AR6 ActiveIntronRegion 0 5.29 2.03 4.29 11.07 13.71 4.81 9.27 4.75 6.95 9.61 43.97 22.19 12.90 42.43 18.86 21.55 28.88 30.26 12.34 22.34 17.91 17.19 24.96 21 I2_SR5 SilentIntronRegion 0 1.45 2.77 1.10 9.00 5.76 3.38 9.24 6.04 9.44 3.15 27.04 21.37 18.85 35.92 23.20 28.67 19.74 16.88 9.07 11.58 11.41 14.12 11.53 22 I2_SR6 SilentIntronRegion 0 29.75 7.62 13.43 11.25 15.15 5.34 11.50 15.82 7.35 6.92 37.17 29.85 29.86 29.05 23.85 24.29 14.29 17.75 7.33 12.12 8.89 16.17 7.85 23 I2_AR8 ActiveIntronRegion 0 30.95 7.45 7.61 11.54 9.41 4.98 5.60 4.88 8.27 5.11 27.00 11.42 8.11 26.59 32.37 22.86 23.79 19.85 6.20 7.02 5.45 15.14 8.79 24 E3_Aa NovelBoundary 0 30.97 12.83 16.97 11.29 12.39 0.00 29.94 9.08 7.67 8.41 35.59 44.26 30.19 15.13 59.21 27.09 27.96 17.29 0.00 11.70 7.91 16.47 6.91 25 ER3a ExonRegion 0 38.11 77.57 679.73 351.50 440.45 306.36 289.60 266.74 230.89 371.59 862.54 207.96 113.59 1073.38 1611.70 1295.99 679.98 814.95 698.73 558.02 332.13 286.41 546.62 26 E3_Da KnownBoundary 0 3.78 0.00 6.59 0.00 0.00 5.34 2.12 3.66 5.32 0.00 10.00 0.00 0.00 0.00 8.90 7.43 16.46 7.46 12.52 3.20 3.15 5.33 0.00 27 E3a_E4a KnownJunction 0 28.82 289.16 556.75 353.34 1482.77 1513.11 1663.04 263.86 190.68 336.96 636.48 272.49 111.36 1182.48 1357.32 818.50 876.30 170.12 560.20 425.94 353.86 395.57 179.77 28 ER3b ExonRegion 0 4.78 0.87 6.41 0.45 0.66 2.34 1.35 2.75 3.09 1.10 10.60 0.65 0.83 5.39 8.01 11.48 8.11 2.33 4.94 0.63 3.56 3.34 1.27 29 ER4a ExonRegion 0 85.55 143.62 264.75 146.48 180.08 191.95 212.32 128.85 96.04 157.52 368.14 178.97 82.65 418.57 606.79 218.00 335.04 78.09 231.88 198.23 169.29 215.51 56.66