Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GOLPH3 Gene 0 29.92 94.09 31.42 37.89 40.19 37.74 37.20 44.47 54.53 55.34 72.35 76.77 72.81 87.92 55.31 56.69 66.94 37.49 29.42 50.61 49.06 122.44 53.41 2 265070 Transcript 0 83.58 272.97 112.70 136.27 145.46 124.42 113.97 184.62 212.05 219.36 313.45 236.08 251.43 329.78 202.10 201.44 272.23 132.06 93.63 193.65 186.05 418.50 182.14 3 ER1a ExonRegion 0 11.78 30.63 10.06 8.16 10.77 23.96 18.54 17.04 24.87 33.23 42.39 8.47 11.24 65.06 33.99 31.45 41.42 30.39 13.81 31.79 49.35 56.56 35.65 4 E1a_E2a KnownJunction 0 75.94 162.27 57.77 51.54 137.52 151.22 90.89 143.18 172.34 194.51 289.23 70.82 99.18 319.74 173.06 185.25 257.60 186.21 76.24 165.80 274.23 304.27 198.21 5 E1a_E3a NovelJunction 0 3.56 8.55 0.00 11.15 7.81 5.22 0.00 6.57 10.68 6.12 4.84 11.55 13.15 2.53 0.00 8.37 0.00 9.66 3.76 5.11 8.28 5.57 3.41 6 I1 Intron 0 15.80 10.59 12.88 18.55 12.15 3.95 22.43 15.22 13.78 10.79 4.32 12.65 17.22 2.81 11.40 11.37 11.54 7.75 7.79 13.55 5.17 4.83 11.66 7 I1_AR1 ActiveIntronRegion 0 15.16 11.78 12.28 18.05 10.86 2.73 20.18 13.55 11.64 5.78 5.74 16.42 13.51 4.86 15.61 11.11 15.56 6.02 5.94 15.62 3.58 3.95 11.86 8 I1_SR2 SilentIntronRegion 0 11.05 9.10 13.37 13.42 15.05 2.92 27.46 9.78 11.79 7.41 4.91 14.35 20.08 4.20 9.73 10.88 12.98 4.80 7.66 13.70 3.43 3.25 10.15 9 I1_AR3 ActiveIntronRegion 0 9.96 6.54 11.29 14.22 11.61 4.68 27.36 7.15 13.18 9.09 7.95 4.82 14.02 5.10 17.72 19.01 24.04 11.93 9.84 14.42 8.40 4.13 17.16 10 I1_AR4 ActiveIntronRegion 0 13.95 9.44 6.59 10.80 8.98 4.77 22.92 6.63 9.82 7.71 5.45 16.52 23.04 2.43 9.28 8.67 10.34 2.78 3.98 11.87 1.24 1.99 9.28 11 I1_SR3 SilentIntronRegion 0 16.32 9.43 14.22 19.50 11.43 4.05 20.34 16.53 12.53 12.27 2.26 10.05 16.66 2.04 13.17 8.77 9.05 4.76 8.01 10.82 3.10 1.89 8.14 12 I1_AR5 ActiveIntronRegion 0 36.80 8.45 19.77 26.60 15.25 3.71 25.89 30.04 18.32 14.01 4.16 11.03 17.68 3.59 19.41 16.98 14.26 11.95 8.23 14.77 5.67 3.65 20.52 13 I1_SR4 SilentIntronRegion 0 17.61 10.77 15.66 17.13 8.90 3.25 20.43 17.44 14.99 13.00 4.84 7.39 8.31 2.07 13.24 12.25 9.48 6.84 8.03 9.99 4.32 2.22 11.47 14 I1_SR5 SilentIntronRegion 0 12.12 10.24 9.58 19.49 14.04 2.62 20.07 11.91 12.68 10.24 2.36 11.92 16.41 1.10 8.94 8.19 5.60 7.16 5.74 12.86 5.61 6.19 10.27 15 I1_AR6 ActiveIntronRegion 0 17.96 12.55 12.33 31.31 12.39 4.58 31.47 22.88 19.67 11.97 2.99 26.19 27.95 2.76 10.79 10.87 12.90 6.45 9.47 19.93 2.88 11.09 11.14 16 I1_SR6 SilentIntronRegion 0 15.44 9.53 6.92 15.66 10.57 4.11 23.31 14.16 13.14 8.72 4.86 14.83 14.22 3.74 7.93 12.51 10.80 11.14 8.33 15.86 8.35 9.43 15.08 17 I1_AR7 ActiveIntronRegion 0 13.82 14.46 14.63 23.12 15.03 6.08 24.10 21.42 21.50 14.32 8.97 20.02 29.68 3.99 9.75 21.27 19.67 23.99 12.31 25.75 16.45 13.45 23.12 18 I1_SR7 SilentIntronRegion 0 23.48 22.14 15.49 21.25 13.71 6.52 23.98 16.37 17.06 13.24 6.97 10.21 17.25 1.27 9.12 8.88 10.67 7.71 7.23 10.92 5.30 9.75 10.42 19 E2_Aa NovelBoundary 0 37.78 29.60 18.18 34.43 19.35 5.39 20.45 19.88 18.92 16.92 4.69 11.70 40.74 2.47 10.75 0.00 7.85 1.66 0.00 5.62 0.00 19.72 0.00 20 ER2a ExonRegion 0 97.14 332.00 103.31 98.81 147.04 105.18 116.21 173.92 213.12 259.19 395.42 223.33 279.27 454.64 277.42 226.98 346.69 176.59 126.09 229.45 259.57 451.05 237.40 21 E2_Da NovelBoundary 0 12.37 27.36 7.84 20.31 18.59 5.79 10.91 9.78 9.29 12.65 7.37 6.30 20.45 0.00 19.41 0.00 4.77 0.00 4.80 5.69 0.00 0.00 0.00 22 E2a_E3a KnownJunction 0 149.43 480.97 156.47 147.00 210.10 131.46 169.85 244.80 245.80 292.15 484.60 287.04 293.97 513.04 274.18 255.23 425.71 157.23 121.23 232.85 238.52 580.06 236.37 23 I2_AR1 ActiveIntronRegion 0 10.63 6.16 4.46 10.69 11.35 0.00 13.37 7.02 7.77 6.79 0.88 1.80 7.45 2.05 6.48 3.75 1.67 3.71 5.63 7.51 1.11 3.16 2.22 24 E3_Aa NovelBoundary 0 10.00 17.83 5.12 28.57 12.73 2.90 29.32 26.25 4.75 4.73 0.00 0.00 13.64 0.00 0.00 4.36 8.70 4.44 0.00 12.85 8.59 3.12 4.35 25 ER3a ExonRegion 0 95.63 476.85 176.18 228.78 228.58 176.09 172.56 267.23 326.77 294.58 424.28 429.41 417.54 424.93 255.71 305.02 423.03 188.12 171.76 292.12 233.84 711.17 294.43 26 E3_Da NovelBoundary 0 17.26 5.79 0.00 9.39 8.23 0.00 19.52 13.10 5.18 5.48 0.00 5.70 0.00 0.00 11.37 11.79 20.48 6.84 0.00 17.13 2.97 2.63 0.00 27 E3a_E4a KnownJunction 0 128.76 355.73 261.43 389.16 254.50 254.40 200.90 416.33 465.91 428.66 520.71 569.14 603.86 482.02 366.28 368.96 377.56 164.94 127.72 374.43 223.20 743.50 241.58 28 I3_AR2 ActiveIntronRegion 0 11.74 36.18 2.82 6.74 9.01 1.41 7.12 8.24 4.78 3.81 2.74 9.13 13.90 1.26 1.99 1.75 1.45 1.42 3.05 12.06 7.51 6.03 4.68 29 E4_Aa NovelBoundary 0 46.90 117.28 7.10 9.49 19.02 8.40 14.84 11.54 8.39 15.26 0.00 12.00 12.50 2.35 4.45 4.36 9.07 1.95 7.91 35.47 0.00 14.70 0.00 30 ER4a ExonRegion 0 26.35 72.34 23.71 30.47 29.70 28.65 28.83 29.84 35.57 33.20 37.50 64.37 54.96 49.05 34.02 37.15 33.59 20.96 18.59 29.14 23.61 82.90 31.34