Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC9A3 Gene 0 2.46 2.01 16.32 6.41 2.06 3.29 3.14 9.20 10.39 3.44 24.68 6.67 4.60 18.02 10.94 8.51 6.51 34.46 18.04 13.52 12.43 7.32 4.40 2 264938 Transcript 0 1.51 1.16 8.62 3.30 1.22 1.90 1.78 4.78 5.35 1.67 13.77 3.89 2.56 10.01 6.18 4.73 3.38 18.06 9.89 8.36 6.77 4.63 2.68 3 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.74 1.14 0.00 0.00 0.00 4 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.00 0.00 0.00 0.00 5 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.46 0.05 2.37 0.00 0.00 0.00 6 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.26 0.00 0.00 0.00 0.00 0.00 0.00 0.91 2.35 0.00 0.00 0.00 8 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.14 0.00 0.00 0.00 9 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.06 4.36 0.00 0.00 0.00 10 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 11 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 2.68 0.00 1.19 0.00 12 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.66 0.00 0.00 0.00 0.00 0.00 13 ER6a ExonRegion 0 0.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.49 0.00 1.69 0.00 14 E6a_E7a KnownJunction 0 3.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 0.00 15 ER7a ExonRegion 0 0.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.74 0.00 1.09 0.00 0.46 0.74 16 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 0.00 17 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.03 0.00 0.72 0.00 18 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.56 0.00 0.00 0.00 19 ER9a ExonRegion 0 0.00 0.06 0.59 0.17 0.00 0.00 0.19 0.07 1.51 0.00 0.98 0.00 0.00 0.11 0.12 0.17 0.14 0.96 0.36 4.50 0.19 0.44 0.62 20 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.20 0.00 0.00 3.59 21 I9 Intron 0 11.55 12.85 61.55 27.89 8.35 7.44 8.31 35.98 30.88 10.20 64.89 12.77 10.34 33.50 29.75 19.82 17.38 62.05 35.27 32.94 27.23 17.39 9.15 22 I9_AR1 ActiveIntronRegion 0 16.22 18.30 87.69 39.51 11.90 10.60 11.77 51.26 43.79 14.53 92.02 18.19 14.71 47.72 42.27 28.24 24.76 88.25 49.90 46.93 38.56 24.66 12.88 23 E10_Aa NovelBoundary 0 38.30 23.48 209.99 68.69 24.19 23.96 19.74 80.46 81.63 40.45 133.82 30.46 20.45 74.05 57.36 39.82 39.55 191.02 60.71 97.54 67.15 8.63 11.52 24 ER10a ExonRegion 0 18.93 15.92 74.38 30.05 14.68 22.29 14.94 34.94 36.59 8.66 85.84 14.59 7.68 59.84 41.93 25.56 16.76 118.73 48.54 48.43 38.80 26.12 20.47 25 E10_Da NovelBoundary 0 0.00 24.80 154.13 45.91 11.97 26.23 18.02 75.12 72.71 27.96 66.28 6.30 6.01 42.85 22.25 15.47 12.90 175.31 107.96 55.80 49.61 22.04 18.87 26 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94 0.00 2.82 0.00 27 I10 Intron 0 10.61 9.89 83.00 22.42 7.90 10.81 7.61 33.01 33.60 16.11 33.28 5.28 5.61 27.54 23.76 18.37 9.73 132.54 47.82 52.31 26.59 12.28 13.84 28 I10_AR1 ActiveIntronRegion 0 10.67 9.94 83.49 22.55 7.94 10.87 7.66 33.20 33.80 16.21 33.48 5.31 5.64 27.70 23.89 18.47 9.79 133.31 48.09 52.61 26.75 12.35 13.92 29 I10 Intron 0 2.87 7.95 67.31 23.22 6.24 13.24 7.37 20.73 33.64 12.98 30.10 7.82 4.96 18.53 10.60 13.86 5.21 79.66 40.49 24.01 20.55 7.21 15.68 30 I10_AR1 ActiveIntronRegion 0 4.41 7.01 78.07 27.01 9.15 17.06 10.59 26.05 50.13 16.43 45.86 13.13 7.61 23.07 16.59 21.21 7.44 115.71 50.22 36.72 26.84 9.15 18.45 31 I10_SR1 SilentIntronRegion 0 1.53 9.42 61.49 21.40 3.99 10.61 4.77 17.17 20.69 10.77 17.20 3.24 2.86 15.69 5.73 7.98 3.54 51.64 34.25 13.74 16.04 5.84 14.32 32 E11_Aa NovelBoundary 0 3.26 17.96 69.07 22.91 0.00 11.13 12.14 23.95 43.89 15.69 49.33 12.00 7.63 41.26 58.97 23.41 27.21 92.11 29.93 41.03 36.20 13.78 15.02 33 I10_AR2 ActiveIntronRegion 0 1.52 0.89 14.51 1.58 0.00 1.17 2.07 2.77 1.48 0.00 5.95 2.60 0.00 0.78 1.04 0.83 0.00 5.54 4.33 2.89 3.00 1.67 0.35 34 ER11a ExonRegion 0 5.92 4.59 43.48 20.29 4.85 9.12 6.61 19.17 18.21 5.41 69.02 11.23 6.72 43.75 31.84 11.97 13.47 60.21 37.38 34.00 28.88 11.98 7.64 35 E11_Da NovelBoundary 0 3.19 21.31 106.15 48.91 3.99 11.07 15.02 29.33 42.71 13.91 102.13 25.21 13.15 58.16 36.47 24.35 18.14 183.39 56.10 58.23 69.38 31.41 32.44 36 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.07 37 I11 Intron 0 5.24 9.91 84.22 24.20 6.01 9.22 7.68 31.30 37.60 15.87 87.06 11.25 13.54 50.72 42.81 26.91 21.71 129.70 60.39 38.37 54.74 20.32 19.32 38 I11_AR1 ActiveIntronRegion 0 4.38 12.66 95.31 34.53 5.32 9.57 8.61 30.51 46.57 15.50 89.20 8.66 13.34 55.21 45.73 34.57 26.75 135.03 58.88 43.29 61.05 18.17 17.57 39 I11_SR1 SilentIntronRegion 0 6.24 5.26 98.55 25.44 5.37 9.85 4.77 39.53 45.33 19.90 96.56 8.29 12.32 44.13 43.91 27.61 23.81 121.56 66.81 38.39 57.05 24.81 19.09 40 I11_AR2 ActiveIntronRegion 0 5.57 9.63 70.31 15.64 6.85 8.76 8.14 28.88 27.67 14.68 82.19 14.56 14.26 50.08 40.32 20.72 17.02 129.50 59.44 34.69 49.15 20.40 20.93 41 E12_Aa NovelBoundary 0 7.19 6.51 111.59 32.50 7.47 11.58 6.54 47.36 47.68 22.19 121.40 18.31 6.82 41.14 58.84 34.18 29.36 235.58 115.11 41.16 86.86 40.29 15.28 42 ER12a ExonRegion 0 2.49 5.58 35.26 12.85 8.40 13.67 7.26 23.20 13.96 5.36 49.59 17.62 12.16 49.47 24.55 17.67 9.04 109.00 53.05 23.76 27.70 17.26 10.68 43 E12_Da NovelBoundary 0 0.00 0.00 83.65 26.17 6.37 5.17 12.85 58.61 46.61 17.11 60.54 13.20 27.27 33.43 23.36 16.06 35.25 184.43 27.95 27.42 72.59 15.06 11.35 44 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.22 0.00 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 9.04 2.94 0.00 0.00 0.00 45 I12 Intron 0 5.27 10.12 49.40 20.84 2.51 13.12 6.59 28.84 35.49 16.48 76.93 28.43 30.54 51.49 31.79 19.41 26.69 105.12 50.52 30.44 45.20 20.09 9.13 46 I12_AR1 ActiveIntronRegion 0 5.33 10.24 49.99 21.09 2.54 13.28 6.67 29.18 35.93 16.68 77.86 28.78 30.92 52.08 32.16 19.65 27.02 106.41 51.14 30.80 45.76 20.33 9.23 47 E13_Aa NovelBoundary 0 0.00 2.76 138.23 35.76 11.71 12.72 10.02 78.53 89.12 20.44 83.39 22.81 45.45 47.91 61.81 14.18 13.74 145.50 94.97 38.73 48.12 20.27 12.29 48 ER13a ExonRegion 0 3.66 3.52 78.65 28.04 6.98 9.51 8.77 44.51 47.79 20.72 95.16 34.00 30.18 55.45 36.91 37.78 31.35 141.49 63.80 42.18 47.63 27.19 15.98 49 E13_Da NovelBoundary 0 6.45 15.66 116.20 30.87 3.40 45.83 6.49 62.72 49.85 12.17 102.82 38.71 32.95 71.93 73.68 52.04 16.92 127.26 84.71 41.23 79.45 13.90 23.56 50 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.00 0.00 51 I13 Intron 0 3.96 5.71 21.36 9.50 1.25 12.01 3.10 10.85 22.39 5.60 35.27 9.53 16.01 29.41 29.86 13.91 13.90 27.07 22.36 22.90 26.81 10.72 5.50 52 I13_SR1 SilentIntronRegion 0 5.17 2.56 10.12 4.80 0.10 9.78 0.98 6.98 10.48 2.72 22.34 16.84 10.07 11.49 16.33 12.55 12.84 16.36 17.93 11.19 30.12 3.86 7.61 53 I13_AR1 ActiveIntronRegion 0 3.62 6.91 25.67 11.33 1.67 13.07 3.89 12.42 26.94 6.70 40.47 7.31 18.35 36.16 35.07 14.71 14.57 31.34 24.41 27.42 26.36 13.31 4.88 54 E14_Aa NovelBoundary 0 41.79 11.45 122.70 22.51 25.21 20.84 24.78 112.42 89.12 30.19 153.09 32.11 26.30 77.70 56.37 65.62 56.10 255.93 112.76 81.56 110.03 40.54 32.18 55 ER14a ExonRegion 0 2.99 2.84 1.63 0.13 3.63 2.56 7.47 3.74 7.56 1.18 47.10 12.51 11.31 26.76 21.38 20.36 9.27 22.00 20.12 14.22 27.35 16.44 8.41 56 E14_Da NovelBoundary 0 6.74 11.38 92.87 14.88 0.00 10.22 16.43 32.98 58.97 25.98 115.34 25.81 19.48 84.11 22.25 49.05 30.29 127.05 85.56 44.93 55.97 30.74 10.24 57 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.62 0.00 3.06 0.00 58 I14 Intron 0 4.34 2.68 62.89 13.39 5.10 7.52 7.57 30.95 33.72 17.78 80.45 16.43 19.42 60.65 38.07 33.54 26.12 94.36 55.56 44.90 34.85 27.79 14.20 59 I14_SR1 SilentIntronRegion 0 4.36 2.70 63.25 13.47 5.13 7.57 7.61 31.13 33.91 17.89 80.91 16.53 19.53 60.99 38.29 33.73 26.27 94.91 55.87 45.16 35.06 27.95 14.28 60 E15_Aa NovelBoundary 0 30.75 12.89 70.31 14.42 16.13 15.67 6.01 22.71 31.28 18.86 86.76 12.30 31.98 53.98 43.88 56.48 22.35 131.20 44.05 57.21 47.82 20.82 31.84 61 ER15a ExonRegion 0 6.86 2.80 26.78 4.58 1.23 3.42 7.40 15.29 18.96 5.55 56.75 18.76 12.63 47.20 27.94 24.58 12.31 65.62 42.47 33.28 24.32 17.29 10.69 62 E15_Da NovelBoundary 0 3.78 5.33 85.63 12.95 8.06 8.23 10.11 32.33 27.72 13.59 59.86 6.30 19.97 49.91 53.65 15.38 11.03 138.50 63.63 60.59 36.26 14.51 12.12 63 E15a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.62 0.00 2.63 0.00 64 I15 Intron 0 3.28 2.18 47.22 9.44 2.86 4.58 4.25 21.46 26.10 12.02 54.99 9.62 5.72 49.40 34.14 26.92 16.13 75.26 42.48 33.22 45.43 18.62 7.70 65 I15_AR1 ActiveIntronRegion 0 3.29 2.18 47.44 9.48 2.87 4.60 4.27 21.57 26.22 12.07 55.23 9.67 5.75 49.63 34.29 27.04 16.19 75.60 42.68 33.37 45.64 18.70 7.73 66 E16_Aa NovelBoundary 0 0.00 0.00 85.36 32.76 3.99 24.25 10.20 33.19 66.09 19.47 99.34 12.60 6.17 73.52 20.27 34.95 18.23 164.65 66.73 50.37 43.68 22.96 12.98 67 ER16a ExonRegion 0 4.72 2.90 23.84 12.82 0.55 2.22 6.10 16.78 27.18 8.34 45.69 8.95 3.94 39.05 19.33 15.74 16.76 70.23 43.51 25.69 28.27 12.33 6.59 68 E16_Da NovelBoundary 0 11.11 0.00 25.37 10.89 3.90 0.00 4.15 6.57 38.89 9.40 26.27 0.00 6.82 37.61 14.09 27.00 17.20 76.27 47.72 30.81 37.38 8.02 19.97 69 E16a_E17a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70 I16 Intron 0 2.40 3.07 24.69 8.13 2.83 5.13 3.40 14.79 15.16 5.04 40.60 5.68 8.03 40.01 18.70 13.02 13.97 52.18 27.92 16.08 23.64 6.93 6.66 71 I16_SR3 SilentIntronRegion 0 4.09 4.26 38.00 14.50 3.58 8.17 5.68 20.79 20.79 6.13 49.24 7.23 14.07 52.74 24.34 16.20 18.33 64.91 34.60 21.82 31.57 9.25 8.12 72 I16_AR5 ActiveIntronRegion 0 0.69 1.97 11.68 1.67 2.20 2.11 1.12 9.18 9.97 4.17 33.81 4.34 1.90 28.68 13.74 10.40 10.09 41.65 22.43 10.82 16.50 4.84 5.50 73 E17_Aa NovelBoundary 0 0.00 0.00 5.94 0.00 0.00 0.00 0.00 4.31 1.48 1.26 14.42 0.00 0.00 2.59 0.00 0.00 4.02 19.81 13.08 9.01 0.00 0.00 0.00 74 ER17a ExonRegion 0 0.00 0.00 0.00 0.09 0.00 0.00 0.16 0.00 0.19 0.00 4.16 2.25 0.00 8.52 0.00 2.16 2.31 1.29 4.49 0.00 0.15 1.77 0.00