Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC103540.1 Gene 0 2.83 0.00 1.45 1.91 1.06 0.36 0.39 0.64 0.36 0.68 253.14 59.70 130.54 8.11 16.60 17.51 114.90 0.50 0.00 0.21 0.00 0.10 0.58 2 317596 Transcript 0 1.50 0.00 0.74 0.96 0.88 0.30 0.24 0.76 0.20 0.38 211.06 41.43 118.32 7.07 16.13 14.39 86.26 0.37 0.00 0.16 0.00 0.04 0.32 3 IG25_SR4 SilentIntergenicRegion 0 9.47 1.50 1.13 3.78 3.38 0.91 1.79 0.51 1.90 0.30 5.53 17.58 42.09 2.00 12.63 3.66 11.81 0.24 1.33 0.63 0.31 0.08 0.47 4 IG25_AR4 ActiveIntergenicRegion 0 10.39 1.79 0.00 2.05 1.68 0.69 1.50 0.97 2.08 0.43 9.01 16.84 37.31 4.86 15.67 7.11 17.87 0.69 1.60 0.27 0.83 0.52 0.74 5 IG25_SR3 SilentIntergenicRegion 0 16.06 1.22 1.35 4.79 5.32 2.80 2.76 1.55 3.41 1.11 11.63 14.69 65.42 2.71 19.78 5.23 14.97 0.64 1.33 1.48 0.00 0.48 0.00 6 IG25_AR2 ActiveIntergenicRegion 0 26.93 0.00 0.00 0.78 5.76 2.60 0.96 0.00 2.20 0.00 11.06 28.56 29.90 1.69 20.83 6.32 4.68 0.00 0.00 0.00 0.00 0.00 0.00 7 IG25_SR2 SilentIntergenicRegion 0 11.26 0.23 0.00 1.39 1.72 1.57 1.51 0.00 0.17 0.00 3.82 2.25 7.05 1.77 12.58 1.93 10.35 0.00 0.91 0.61 0.00 0.00 0.00 8 IG25_AR1 ActiveIntergenicRegion 0 17.69 0.48 0.71 0.84 4.90 0.00 0.00 2.01 1.43 0.67 12.04 7.04 32.58 1.34 30.74 5.47 14.14 0.00 0.00 1.66 0.00 0.00 0.00 9 ER1a ExonRegion 0 3.44 0.00 1.65 2.57 0.00 0.00 0.24 0.76 0.33 0.61 247.83 56.46 99.26 6.58 17.94 15.78 124.37 0.00 0.00 0.00 0.00 0.19 0.53 10 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.05 0.00 0.00 250.33 25.06 134.24 10.36 22.00 8.54 84.81 0.00 0.00 0.00 0.00 0.00 0.00 11 E1a_E3a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 123.98 31.36 59.90 2.30 15.20 8.37 73.96 0.00 0.00 0.00 0.00 0.00 0.00 12 I1 Intron 0 0.66 0.08 0.14 1.99 0.21 0.07 0.16 0.00 0.36 0.13 23.56 13.85 12.13 0.82 3.16 2.33 10.35 0.00 0.12 0.17 0.00 0.25 0.46 13 I1_SR1 SilentIntronRegion 0 0.66 0.08 0.14 1.99 0.21 0.07 0.16 0.00 0.36 0.13 23.60 13.87 12.15 0.83 3.16 2.33 10.37 0.00 0.13 0.17 0.00 0.25 0.46 14 E2_Aa NovelBoundary 0 0.00 0.00 0.00 2.06 0.00 0.00 0.00 0.00 0.00 0.00 83.13 43.06 47.40 0.00 0.00 3.67 21.51 0.00 0.00 0.00 0.00 0.00 0.00 15 ER2a ExonRegion 0 1.70 0.00 0.03 1.09 1.44 0.49 0.00 0.56 0.00 0.04 266.53 58.43 149.32 5.10 17.21 22.13 98.96 0.00 0.00 0.01 0.00 0.00 0.00 16 E2_Da NovelBoundary 0 0.00 0.00 0.00 1.53 0.00 0.00 0.00 0.00 0.00 0.00 44.48 6.45 32.63 14.42 6.30 7.69 12.53 0.00 0.00 0.00 0.00 0.00 0.00 17 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35.85 0.00 27.27 0.00 10.01 7.60 16.64 0.00 0.00 0.00 0.00 0.00 0.00 18 I2 Intron 0 0.87 0.14 0.21 0.80 0.73 0.21 0.13 0.07 0.32 0.11 80.96 30.48 62.26 3.16 6.73 4.68 30.41 0.00 0.08 0.15 0.04 0.02 0.03 19 I2_SR1 SilentIntronRegion 1 1.03 0.25 0.13 0.93 1.30 0.35 0.02 0.00 0.36 0.25 115.52 35.88 81.83 5.54 8.06 7.20 46.37 0.00 0.15 0.15 0.00 0.00 0.00 20 I2_AR1 ActiveIntronRegion 1 2.86 1.59 0.00 1.71 0.00 0.03 0.12 0.00 0.33 0.00 164.38 39.55 59.10 5.77 16.35 6.09 65.63 0.00 0.00 0.58 0.00 0.00 0.00 21 I2_SR2 SilentIntronRegion 0 0.68 0.00 0.27 0.68 0.43 0.13 0.19 0.11 0.30 0.02 55.82 26.76 50.71 1.60 5.42 3.09 18.97 0.00 0.05 0.12 0.06 0.03 0.04 22 E3_Aa NovelBoundary 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.33 59.07 17.41 25.49 10.18 4.45 4.36 13.84 0.00 0.00 0.00 0.00 0.00 0.00 23 ER3a ExonRegion 0 2.35 0.00 2.01 1.13 2.97 1.02 0.98 0.44 0.68 1.26 254.79 67.22 181.52 13.29 13.47 17.87 106.53 1.87 0.00 0.78 0.00 0.00 1.09 24 IG24 Intergenic 0 0.26 0.07 0.08 0.22 0.20 0.11 0.15 0.07 0.26 0.10 14.54 7.57 13.24 0.95 2.86 1.98 6.78 0.10 0.00 0.07 0.03 0.00 0.08 25 IG24_SR4 SilentIntergenicRegion 0 0.25 0.19 0.51 0.47 0.19 0.51 0.37 0.12 0.21 0.12 38.39 15.02 39.45 1.36 2.55 1.86 15.74 0.28 0.00 0.20 0.20 0.00 0.20 26 IG24_AR3 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.26 2.84 3.00 1.29 2.45 0.00 9.98 0.00 0.00 0.00 0.00 0.00 0.00 27 IG24_SR3 SilentIntergenicRegion 0 0.21 0.00 0.00 0.17 0.27 0.00 0.00 0.00 0.74 0.00 12.42 4.85 6.64 0.00 1.03 1.20 8.87 0.00 0.00 0.00 0.00 0.00 0.00 28 IG24_AR2 ActiveIntergenicRegion 0 0.00 0.00 0.00 1.04 0.26 0.00 0.00 0.51 1.42 0.00 20.02 9.52 2.95 0.37 1.27 0.59 7.73 0.00 0.00 0.00 0.00 0.00 0.00 29 IG24_SR2 SilentIntergenicRegion 0 0.06 0.06 0.00 0.12 0.03 0.02 0.05 0.03 0.08 0.08 9.28 3.20 3.98 0.33 0.88 0.50 4.40 0.00 0.00 0.04 0.00 0.00 0.00 30 IG24_AR1 ActiveIntergenicRegion 0 0.43 0.09 0.00 0.28 0.49 0.00 0.12 0.00 0.21 0.24 19.16 12.89 10.97 1.92 7.45 4.16 8.59 0.25 0.00 0.10 0.00 0.00 0.27