Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CCDC111 Gene 0 40.07 70.69 36.69 47.97 70.82 72.05 74.86 28.68 36.25 56.45 52.80 76.71 50.44 48.41 34.78 42.15 51.80 33.70 31.15 48.00 20.96 27.84 26.89 2 314970 Transcript 0 49.55 80.59 41.96 56.63 82.20 70.49 77.88 32.48 43.68 65.81 60.70 93.65 58.36 52.80 44.53 45.09 56.22 29.83 32.09 50.87 19.14 33.91 26.55 3 ER1a ExonRegion 0 28.08 31.50 9.27 12.27 46.17 71.35 66.49 4.91 10.15 19.30 26.79 5.02 9.13 25.25 12.47 27.93 36.73 41.29 28.09 24.08 20.44 7.15 21.77 4 E1_Da NovelBoundary 0 0.00 0.00 2.87 1.93 8.66 0.00 4.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.24 0.00 11.80 0.00 0.00 5 E1a_E2a KnownJunction 1 0.00 15.19 13.01 21.08 10.53 18.17 8.39 12.16 23.26 44.05 69.28 24.61 6.82 49.74 19.41 32.04 86.30 28.40 35.11 34.71 33.36 6.25 8.54 6 ER2a ExonRegion 1 1.44 15.98 20.42 32.48 19.73 18.95 18.09 22.09 48.57 70.24 83.91 22.65 35.12 93.84 47.28 107.95 100.34 74.79 59.46 79.19 53.23 35.02 50.04 7 E2_Da NovelBoundary 0 6.89 0.00 2.75 27.94 0.00 5.28 4.28 5.83 3.33 1.05 0.00 6.30 0.00 0.00 5.32 0.00 0.00 6.59 14.02 2.94 2.53 0.00 4.10 8 E2a_E3a KnownJunction 1 0.00 9.21 34.89 37.09 31.58 14.93 43.15 21.93 61.14 84.78 47.64 12.60 21.59 108.54 43.02 135.43 55.91 138.00 97.23 97.09 28.60 77.15 80.07 9 E2a_E4a NovelJunction 0 3.70 15.39 3.67 5.13 0.00 5.11 1.72 0.00 1.33 1.48 15.32 23.41 0.00 4.59 0.00 0.00 4.77 13.85 4.80 11.57 0.00 0.00 4.35 10 I2 Intron 0 10.42 8.36 11.26 20.38 12.52 6.37 12.07 4.98 4.23 3.93 1.74 4.48 7.24 0.59 2.94 3.34 3.71 3.22 2.70 6.69 0.95 0.36 1.47 11 I2_AR1 ActiveIntronRegion 0 21.17 9.16 17.10 30.88 18.01 8.13 13.36 4.93 3.29 3.18 0.63 3.00 7.26 0.25 1.77 2.55 3.31 2.50 3.19 4.12 0.32 0.30 1.47 12 I2_SR1 SilentIntronRegion 0 7.01 8.11 9.41 17.06 10.79 5.81 11.68 5.00 4.53 4.17 2.09 4.95 7.25 0.70 3.31 3.59 3.84 3.46 2.54 7.52 1.16 0.38 1.47 13 E3_Aa NovelBoundary 1 7.41 3.35 16.06 39.79 8.06 15.96 7.91 9.61 2.84 11.31 2.42 12.60 30.36 0.00 5.81 7.43 0.00 8.79 8.09 2.68 3.15 2.57 0.00 14 ER3a ExonRegion 0 42.15 75.32 50.21 61.65 104.72 126.12 128.34 33.77 56.04 83.27 71.92 100.16 69.09 69.96 39.76 74.45 90.78 63.57 52.54 77.80 35.95 47.36 43.37 15 E3a_E4a KnownJunction 0 34.45 54.46 38.50 65.93 45.76 74.56 88.50 21.93 50.52 63.72 57.86 111.79 54.70 63.45 49.69 26.66 75.46 32.38 42.54 68.01 19.95 36.50 27.32 16 I3_AR1 ActiveIntronRegion 0 3.82 6.05 8.52 16.42 7.60 5.18 11.95 7.86 4.79 3.49 0.44 4.18 11.62 3.84 3.39 2.68 7.14 3.94 0.26 2.61 0.27 0.41 1.71 17 E4_Aa NovelBoundary 1 0.00 3.16 4.79 11.09 3.74 14.88 10.16 5.05 4.20 1.99 0.00 13.95 26.95 0.00 0.00 0.00 3.74 0.00 0.00 5.62 0.00 0.00 13.83 18 ER4a ExonRegion 0 33.95 58.02 40.67 69.92 48.98 60.20 87.79 32.15 51.62 69.91 75.23 145.57 95.24 72.89 39.85 49.59 74.07 46.16 33.77 76.12 20.69 48.75 43.51 19 E4_Da NovelBoundary 0 7.56 0.00 5.71 18.31 7.64 2.90 3.97 0.00 7.32 4.65 0.00 0.00 0.00 0.00 0.00 8.12 4.77 6.96 4.80 8.56 0.00 0.00 0.00 20 E4a_E5a KnownJunction 0 32.97 85.18 32.88 62.93 51.36 39.18 89.52 26.37 45.80 53.43 70.02 135.34 117.85 40.61 22.25 52.21 92.19 18.99 27.86 56.06 10.81 45.25 19.55 21 E4a_E6a NovelJunction 0 3.78 16.25 5.50 8.89 28.35 24.25 14.49 11.99 10.07 8.38 15.95 0.00 20.45 0.00 0.00 0.00 12.34 17.37 0.00 9.20 0.00 0.00 8.71 22 ER5a ExonRegion 0 25.04 75.92 35.63 61.53 76.63 71.11 86.46 31.99 38.28 62.15 81.38 122.56 80.85 57.32 31.11 44.12 78.59 18.83 28.37 58.38 14.88 33.99 25.21 23 E5a_E6a KnownJunction 1 16.67 68.41 28.33 58.37 58.23 49.18 75.39 35.45 21.27 61.68 72.02 156.05 163.30 38.32 37.09 75.28 66.11 12.10 11.58 47.04 19.89 30.13 38.16 24 E5a_E7a NovelJunction 0 0.00 3.03 1.36 1.47 0.00 0.00 0.00 0.00 0.00 0.00 9.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER6a ExonRegion 0 27.60 63.82 38.39 54.00 60.11 71.83 73.12 46.59 41.87 77.14 81.35 111.66 111.32 77.63 38.54 67.23 88.43 40.84 46.40 77.04 30.03 28.92 41.93 26 E6a_E7a KnownJunction 1 36.23 55.12 19.51 43.22 91.34 87.56 124.27 45.59 47.34 61.08 45.54 93.93 105.35 76.17 48.83 44.86 72.28 27.48 38.97 55.93 36.02 23.09 63.77 27 ER7a ExonRegion 0 36.66 89.83 47.73 58.31 89.80 87.98 93.45 40.94 42.85 68.66 65.17 80.26 71.26 72.36 42.01 63.30 77.85 62.37 47.81 66.10 47.00 31.09 49.69 28 E7_Da NovelBoundary 0 20.74 12.43 29.06 26.27 31.41 5.05 59.27 9.94 10.73 13.32 11.32 13.95 0.00 9.89 6.30 25.63 22.25 50.86 17.69 17.58 8.83 6.25 8.71 29 E7a_E8a KnownJunction 1 31.26 54.99 37.76 36.43 94.82 121.24 81.88 22.14 29.51 74.27 76.97 36.61 49.19 50.39 25.09 11.54 76.76 1.66 25.60 40.91 25.64 16.78 14.17 30 E7a_E9a NovelJunction 0 7.04 16.31 0.00 3.83 7.56 2.78 25.35 0.00 0.00 1.02 7.48 0.00 0.00 0.00 0.00 0.00 0.00 4.64 0.00 8.95 0.00 0.00 4.01 31 I7 Intron 0 9.41 16.62 11.98 20.89 9.49 11.04 19.74 8.59 11.08 14.52 4.71 6.72 3.83 6.31 7.62 10.97 10.17 39.51 13.36 33.70 7.58 3.51 8.95 32 I7_SR1 SilentIntronRegion 0 7.12 14.18 11.94 18.46 9.12 12.06 19.39 8.43 10.36 14.34 4.02 6.29 2.38 6.80 6.07 14.65 10.16 39.62 15.12 32.47 8.85 2.01 8.78 33 I7_AR1 ActiveIntronRegion 0 12.80 14.74 18.81 32.44 11.51 18.80 22.04 10.03 11.67 23.63 14.21 8.23 2.81 4.14 1.60 11.00 18.82 30.49 10.19 34.68 14.32 5.42 3.23 34 I7_AR2 ActiveIntronRegion 0 15.26 25.77 19.09 33.49 7.70 12.14 20.54 13.58 15.97 20.09 8.09 7.24 5.62 7.24 11.72 9.11 14.27 60.61 17.84 47.77 10.18 5.56 10.82 35 I7_SR2 SilentIntronRegion 0 8.78 14.02 6.22 14.90 11.48 8.02 19.72 4.94 8.59 10.10 2.84 6.99 5.06 4.87 7.52 5.95 6.62 23.63 6.98 25.11 3.00 4.48 8.13 36 E8_Aa NovelBoundary 0 6.52 31.31 16.79 49.68 45.59 20.61 47.78 4.35 9.64 16.71 4.90 6.00 19.80 0.00 4.45 4.36 0.00 5.10 0.00 18.54 0.00 7.90 3.33 37 ER8a ExonRegion 0 43.34 99.40 45.81 58.45 78.27 82.34 78.21 39.78 39.20 72.63 54.62 98.49 65.46 43.82 40.62 27.66 35.78 10.49 35.10 55.27 9.50 37.23 18.20 38 E8_Da NovelBoundary 0 17.86 48.81 21.61 40.42 15.20 66.67 50.79 4.85 14.06 31.59 6.90 6.30 26.13 4.94 4.45 3.50 4.21 7.88 8.28 17.51 0.00 10.41 3.50 39 E8a_E9a KnownJunction 0 26.08 127.54 55.47 29.27 88.62 87.79 44.91 23.91 29.08 62.43 29.95 25.66 36.20 31.55 41.78 11.71 27.40 3.69 20.42 35.67 2.78 24.06 8.02 40 E8a_E10a NovelJunction 0 10.74 0.00 0.00 3.46 0.00 2.90 6.76 0.00 0.00 1.53 5.32 0.00 0.00 4.41 9.64 8.20 0.00 0.00 0.00 0.00 2.35 0.00 3.24 41 I8 Intron 0 5.61 12.96 8.05 18.04 13.82 9.79 19.74 6.65 8.24 9.59 5.72 7.53 11.81 4.72 4.74 10.44 8.30 9.09 6.58 14.73 2.43 3.37 6.88 42 I8_AR1 ActiveIntronRegion 0 5.78 13.51 15.04 35.33 15.81 9.78 26.35 8.08 16.25 14.52 9.10 10.27 22.54 5.82 5.75 16.57 15.62 17.45 11.15 23.37 4.62 2.75 12.93 43 I8_SR2 SilentIntronRegion 0 7.32 8.10 4.78 14.73 15.64 6.43 19.15 3.55 6.45 8.75 5.88 9.74 13.63 5.83 4.55 9.75 10.42 5.56 4.97 12.63 1.15 3.15 7.48 44 E9_Aa NovelBoundary 0 3.56 16.97 8.87 21.84 19.27 13.12 15.32 2.18 14.55 11.71 4.53 18.91 0.00 10.24 0.00 7.60 4.11 17.49 9.13 17.32 3.15 0.00 3.84 45 ER9a ExonRegion 0 39.31 116.99 39.18 44.59 88.75 76.05 79.82 23.69 39.69 69.34 42.74 103.37 59.02 35.69 32.27 32.56 30.64 11.27 15.78 36.41 8.00 21.84 14.65 46 E9_Da NovelBoundary 0 3.78 2.63 11.38 39.59 4.33 19.19 12.23 8.34 5.93 12.36 5.11 6.30 13.31 2.47 10.26 17.94 8.42 6.59 4.80 13.87 0.00 10.53 4.35 47 E9a_E10a KnownJunction 1 50.01 88.21 42.28 49.58 45.50 57.13 66.16 33.64 42.42 60.52 35.38 164.00 32.79 31.02 24.60 36.83 25.06 16.37 23.81 17.26 11.31 37.54 14.60 48 E9a_E11a NovelJunction 1 3.78 17.69 1.74 1.86 8.49 12.55 0.00 2.26 5.15 2.66 0.00 30.31 0.00 0.00 0.00 0.00 0.00 0.00 4.24 0.00 0.00 3.12 0.00 49 E10_Aa NovelBoundary 0 7.56 20.26 5.47 18.71 25.98 5.45 12.59 4.81 16.00 13.97 9.95 0.00 0.00 7.18 0.00 4.36 4.77 5.93 4.61 20.52 0.00 6.25 3.41 50 ER10a ExonRegion 1 31.61 85.18 45.05 52.94 73.58 53.24 67.62 23.31 54.94 59.21 52.15 148.16 60.40 44.41 37.62 28.70 39.13 17.92 22.44 50.50 8.15 37.27 16.51 51 E10_Da NovelBoundary 0 7.56 2.76 8.16 31.13 11.80 5.62 16.65 6.82 21.73 13.22 7.26 12.60 6.33 9.12 8.90 12.39 8.32 8.00 0.00 8.82 3.15 12.37 8.19 52 E10a_E11a KnownJunction 0 47.05 103.93 38.38 60.00 118.00 90.74 93.01 22.06 51.36 55.39 61.75 51.17 49.35 42.85 53.65 25.29 34.60 7.59 15.81 42.82 8.53 56.21 0.00 53 ER11a ExonRegion 0 62.43 143.77 44.63 61.19 120.83 102.27 106.03 32.92 56.15 60.22 50.63 134.25 61.40 50.29 43.78 37.27 40.76 9.12 19.64 44.41 7.18 42.49 16.52 54 E11_Da NovelBoundary 0 9.11 33.74 7.60 9.66 29.71 15.45 19.30 4.15 26.33 30.19 14.37 12.15 14.45 26.02 4.45 19.65 4.11 5.51 11.39 19.18 0.00 5.33 3.93 55 E11a_E12a KnownJunction 0 65.27 122.22 30.51 64.79 40.83 48.15 58.78 28.22 42.74 49.00 43.06 96.63 25.81 30.08 53.16 19.31 25.15 8.50 12.33 27.61 0.00 25.04 8.54 56 I11 Intron 0 10.61 24.90 10.03 21.44 21.28 21.04 31.91 10.93 24.93 23.81 15.75 18.95 27.23 26.12 11.64 22.06 15.59 31.85 11.06 31.08 14.44 9.84 11.04 57 I11_SR1 SilentIntronRegion 0 8.79 11.62 6.65 9.91 19.36 16.34 23.00 7.07 13.25 12.93 7.40 8.83 15.22 20.25 10.67 15.22 11.20 26.33 7.39 23.96 10.98 5.96 8.59 58 I11_AR1 ActiveIntronRegion 0 8.98 23.28 9.02 19.32 20.67 25.73 32.58 8.14 20.10 22.59 15.84 12.06 18.28 26.17 13.50 21.25 17.38 37.62 14.64 42.12 17.13 9.22 14.89 59 I11_SR2 SilentIntronRegion 0 13.16 33.68 12.88 29.55 23.71 21.11 37.36 15.27 35.17 31.10 20.50 29.59 40.61 30.24 11.40 27.04 17.25 32.11 10.89 28.40 14.96 12.64 10.11 60 E12_Aa NovelBoundary 1 51.64 99.65 6.36 50.31 118.85 28.39 54.10 34.95 23.32 36.88 18.43 24.01 0.00 20.31 26.70 40.67 8.51 1.87 0.00 25.25 2.84 5.88 3.24 61 ER12a ExonRegion 1 149.64 141.08 69.29 101.97 141.07 106.38 104.90 49.98 50.76 102.10 89.05 104.17 29.95 54.89 72.99 37.17 40.09 23.42 23.53 47.88 11.23 46.72 13.80 62 E12a_E13a KnownJunction 0 188.18 136.29 64.90 109.88 180.39 103.97 121.89 51.63 59.75 87.41 97.24 159.35 53.24 49.80 67.87 54.17 52.92 21.47 26.26 46.85 14.64 35.58 25.95 63 ER13a ExonRegion 0 116.86 103.41 83.85 103.64 175.75 85.29 94.20 64.76 66.54 91.12 84.64 134.49 48.80 58.40 97.04 43.70 53.52 30.90 30.97 42.46 17.35 35.42 26.12 64 E13a_E14a KnownJunction 1 139.14 117.61 102.89 91.80 209.76 68.82 95.35 68.72 64.44 91.60 57.86 125.14 53.08 43.56 120.28 40.76 34.03 27.86 36.71 56.12 17.54 40.17 19.89 65 I13 Intron 0 17.66 19.82 10.43 17.86 24.38 10.23 18.49 13.54 11.68 12.09 3.77 7.22 7.03 3.29 2.67 5.12 6.43 5.42 5.20 8.97 2.10 3.02 2.66 66 I13_SR1 SilentIntronRegion 0 17.78 20.17 10.46 18.07 24.72 10.39 18.79 13.69 11.86 12.21 3.83 7.22 7.06 3.35 2.70 5.21 6.55 5.50 5.21 9.11 2.14 2.99 2.71 67 I13_AR1 ActiveIntronRegion 0 11.99 0.56 9.60 7.19 5.95 1.02 1.84 5.86 1.72 5.67 0.43 7.46 5.99 0.00 0.97 0.00 0.00 1.33 4.96 1.54 0.00 5.09 0.00 68 E14_Aa NovelBoundary 0 68.68 102.02 83.85 84.54 189.81 76.26 139.16 71.55 50.12 91.98 64.28 37.06 41.88 33.55 67.00 18.71 25.06 101.15 52.71 85.01 3.15 17.21 0.00 69 ER14a ExonRegion 0 32.31 37.24 23.46 25.86 28.31 28.68 27.06 16.26 13.98 22.17 14.79 24.81 9.48 12.72 20.40 9.80 7.18 10.08 8.33 11.81 4.21 8.59 6.90