Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HMGB2 Gene 0 841.88 1520.88 1180.34 842.23 1526.71 940.51 2144.03 575.76 247.37 1183.62 1931.25 1657.56 481.63 1934.26 1407.85 1436.49 1730.14 1340.14 524.62 1225.33 61.71 157.43 43.76 2 296503 Transcript 1 361.02 325.80 347.07 209.70 435.55 472.40 627.52 125.24 71.45 320.30 599.11 64.45 15.91 382.83 306.14 489.07 469.87 628.04 163.61 259.03 33.63 16.34 23.44 3 446922 Transcript 0 25.39 38.92 34.16 18.80 40.08 29.36 66.41 16.34 12.40 48.12 73.46 29.69 19.64 35.02 62.35 42.96 43.14 72.49 13.79 27.22 4.05 0.16 0.73 4 438704 Transcript 1 22.86 21.68 16.39 6.21 32.35 54.45 73.84 5.24 7.50 12.51 34.39 3.43 0.60 29.03 18.76 24.28 30.13 25.36 7.82 15.08 1.51 1.42 0.23 5 IG22_AR6 ActiveIntergenicRegion 0 2.19 3.69 3.01 1.31 11.78 23.53 11.14 2.24 4.28 3.45 16.76 7.32 1.50 2.36 6.65 4.62 5.13 5.48 5.51 3.56 2.28 7.01 4.50 6 IG22_AR2 ActiveIntergenicRegion 0 4.83 21.12 16.29 13.04 18.22 14.41 10.92 7.64 14.08 17.52 8.10 7.06 3.57 7.26 5.63 6.88 2.55 17.75 2.48 12.62 1.24 1.18 0.00 7 IG22_SR1 SilentIntergenicRegion 0 1.94 15.40 12.07 7.11 12.63 10.69 9.53 5.70 9.64 15.71 7.51 1.03 1.71 11.46 5.06 7.95 7.12 26.14 1.38 12.58 1.72 0.30 0.43 8 IG22_AR1 ActiveIntergenicRegion 0 1.62 8.30 8.89 5.13 5.98 12.18 5.35 5.78 8.38 10.70 10.99 1.87 0.00 5.97 4.21 9.98 3.72 20.42 3.86 10.78 1.55 0.27 1.31 9 ER1a ExonRegion 1 366.64 201.09 50.66 33.81 289.69 349.35 379.96 36.00 21.37 55.79 566.58 8.11 11.54 507.14 307.93 513.73 357.98 239.23 129.57 105.92 28.22 19.95 17.35 10 E1_Ab KnownBoundary 1 1687.19 959.96 172.76 103.02 1412.31 1386.59 1759.35 108.52 65.16 174.47 1863.31 25.66 32.14 1795.17 1085.85 1963.16 1233.47 817.50 557.47 392.39 87.11 75.44 60.10 11 ER1b ExonRegion 1 1779.47 2158.15 466.81 304.22 1859.83 2821.41 4784.20 170.55 135.55 586.45 1670.77 89.91 46.46 1491.39 1148.53 2152.51 2224.27 1319.51 555.88 1270.18 73.31 94.90 56.79 12 E1a_E2b KnownJunction 1 355.40 450.51 643.47 385.60 581.41 595.45 875.08 214.49 121.53 584.81 631.63 120.79 20.29 258.52 304.35 464.41 581.77 1016.85 197.65 412.14 39.04 12.74 29.54 13 E1b_E2b KnownJunction 0 24.08 40.85 20.58 12.39 37.86 26.63 66.77 15.20 8.42 35.40 70.49 41.56 26.30 38.55 75.16 38.37 33.47 47.84 9.32 23.84 2.59 0.00 0.00 14 ER1c ExonRegion 0 26.70 37.00 47.74 25.21 42.30 32.09 66.05 17.48 16.39 60.83 76.42 17.82 12.99 31.48 49.54 47.55 52.81 97.15 18.25 30.61 5.51 0.32 1.47 15 ER2a ExonRegion 0 22.86 21.68 16.39 6.21 32.35 54.45 73.84 5.24 7.50 12.51 34.39 3.43 0.60 29.03 18.76 24.28 30.13 25.36 7.82 15.08 1.51 1.42 0.23 16 E2_Ab KnownBoundary 0 81.20 48.81 22.41 11.89 115.03 183.70 204.30 18.48 12.36 19.26 47.91 11.25 6.17 38.50 34.12 41.95 46.75 41.66 13.37 20.01 8.77 0.00 0.00 17 ER2b ExonRegion 1 617.73 706.67 1257.50 689.12 631.95 436.04 704.65 530.42 276.62 1202.77 2790.19 545.90 237.61 2189.87 1588.10 2138.66 2666.56 2245.46 744.72 1565.45 110.11 166.14 60.28 18 E2a_E3a KnownJunction 1 1429.96 1716.08 2446.13 1460.85 2095.84 1129.69 1919.66 896.36 414.43 1789.38 3119.21 1002.48 486.33 2586.92 2684.10 4090.21 3027.49 4765.15 1280.60 2309.01 115.52 205.01 112.94 19 ER3a ExonRegion 0 1184.02 2695.31 2311.13 1593.60 3914.84 3161.34 6075.89 961.47 435.56 1982.86 3782.72 1895.95 708.55 3572.52 2312.91 2742.56 3618.57 3469.44 995.40 2242.69 136.72 226.35 74.72 20 E3a_E4a KnownJunction 0 2176.09 4326.33 2831.86 2137.26 2757.98 1564.27 4598.75 1297.04 476.88 2450.19 4841.44 2824.82 1250.57 4842.04 2991.17 3311.95 4404.76 3529.05 1250.01 2804.24 140.23 300.23 64.19 21 E4_Aa NovelBoundary 0 314.50 137.74 227.67 111.87 215.70 118.85 211.94 52.94 28.82 74.65 126.77 135.94 13.64 140.44 111.50 147.40 98.27 86.22 90.92 96.58 13.04 5.39 19.12 22 ER4a ExonRegion 0 1944.58 2773.59 2643.92 2035.07 2486.49 1337.01 3173.41 1104.25 448.14 2232.83 3798.29 2753.66 875.45 4779.06 2842.27 3170.66 3625.12 3434.76 1199.43 2495.10 142.36 249.18 92.71 23 E4a_E5a KnownJunction 0 2559.34 4507.62 2670.01 2233.68 3579.88 1797.37 5291.31 1167.20 488.22 2308.19 3893.67 2741.24 996.69 5383.98 3584.16 3886.25 3680.59 3104.24 1371.80 2730.09 164.95 285.23 98.59 24 ER5a ExonRegion 0 679.16 1517.32 1032.47 760.78 1414.40 586.41 1771.61 590.61 238.04 1175.98 1512.63 2178.14 572.33 1498.48 1268.78 955.17 1181.60 682.24 377.48 1015.14 34.14 168.55 33.09 25 IG21 Intergenic 0 14.67 74.01 33.20 73.45 146.18 29.99 96.84 60.01 31.28 99.88 11.13 52.39 13.10 19.34 9.83 8.83 10.78 37.31 13.45 73.13 0.44 2.89 1.11 26 IG21_AR12 ActiveIntergenicRegion 0 0.30 9.01 1.40 12.27 31.73 7.86 28.37 1.73 3.88 12.94 0.00 15.46 0.00 9.05 0.00 0.42 3.77 10.29 0.00 11.25 0.00 0.00 2.52 27 IG21_AR11 ActiveIntergenicRegion 0 22.80 84.76 55.73 108.17 159.98 35.56 118.16 72.14 35.35 145.19 19.92 88.53 13.44 29.11 14.05 16.30 18.67 48.36 17.19 100.92 0.60 4.75 1.18 28 IG21_SR4 SilentIntergenicRegion 0 15.53 77.18 33.93 68.67 203.35 34.66 142.31 53.40 28.79 96.45 11.67 63.30 19.13 22.22 14.23 5.30 9.37 30.95 10.05 84.15 0.33 2.56 0.00 29 IG21_AR10 ActiveIntergenicRegion 0 13.91 38.23 33.89 84.94 106.74 35.84 65.02 56.72 36.02 114.12 15.75 59.80 15.45 29.30 12.84 11.29 24.34 49.10 17.20 114.24 0.00 2.58 0.00 30 IG21_SR3 SilentIntergenicRegion 0 4.56 38.94 20.91 56.00 113.76 26.77 77.04 38.11 25.99 66.01 5.42 32.84 12.63 20.64 7.95 5.48 9.43 37.26 11.65 57.79 0.00 2.41 1.27 31 IG21_AR9 ActiveIntergenicRegion 0 17.44 111.70 23.71 76.82 158.58 32.35 90.13 79.69 41.72 120.86 8.55 38.94 15.52 13.71 6.80 8.27 6.84 39.29 19.47 76.11 0.37 3.29 1.95 32 IG21_AR8 ActiveIntergenicRegion 0 13.53 55.39 15.83 30.74 107.17 13.66 52.99 32.48 18.53 42.16 7.53 34.29 5.43 9.23 0.23 5.32 7.82 25.43 12.57 51.12 0.00 1.81 0.00 33 IG21_SR2 SilentIntergenicRegion 0 10.24 43.04 35.17 47.59 147.79 17.31 81.63 45.24 19.70 77.87 7.55 36.23 0.00 9.51 5.83 4.97 7.98 16.40 8.65 37.86 2.11 1.21 1.26 34 IG21_AR1 ActiveIntergenicRegion 0 30.94 151.85 45.23 70.21 153.67 35.66 117.74 73.28 30.09 90.29 11.73 92.49 12.21 15.65 17.31 12.50 8.31 20.48 6.21 47.91 0.30 2.98 3.04 35 IG21_SR1 SilentIntergenicRegion 0 12.46 65.81 28.72 52.24 130.22 22.46 81.21 61.52 24.78 62.15 9.44 32.49 9.01 7.96 7.13 5.56 5.06 28.23 5.77 45.79 0.88 0.63 0.39