Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PDLIM3 Gene 0 91.87 4.35 164.89 32.25 26.12 32.34 52.37 50.02 21.58 17.21 0.00 3.58 0.00 0.23 0.28 0.15 0.08 27.06 38.72 2.87 6.68 75.83 36.45 2 284771 Transcript 0 277.60 0.00 210.34 36.76 23.51 51.50 39.30 74.59 24.28 22.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31.34 51.95 0.00 22.92 89.16 53.69 3 284767 Transcript 0 8.96 0.00 1.83 2.06 0.00 5.79 8.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 14.12 0.00 0.00 2.57 3.41 4 284770 Transcript 0 0.00 0.00 2.25 3.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.88 0.00 5 ER1a ExonRegion 0 48.32 0.00 26.61 4.27 5.83 20.59 16.99 8.74 4.91 5.16 0.00 0.00 0.00 0.27 0.00 0.00 0.00 13.02 17.22 0.85 5.12 14.00 21.21 6 E1a_E2a KnownJunction 0 49.34 0.00 81.87 16.35 3.48 2.84 9.54 31.34 16.03 14.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.73 22.87 2.94 14.33 8.70 28.17 7 ER2a ExonRegion 0 23.73 0.16 144.14 26.96 11.81 17.90 19.68 43.06 27.60 21.47 0.00 1.45 0.00 0.83 0.69 0.00 0.00 38.68 61.74 4.47 11.84 65.78 63.06 8 E2a_E3a KnownJunction 0 42.67 2.83 152.06 42.42 27.42 80.35 36.66 55.41 34.64 24.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38.84 33.13 8.88 8.53 90.26 84.17 9 ER3a ExonRegion 0 40.71 2.73 194.75 43.04 36.08 100.77 100.79 71.62 33.46 25.46 0.00 0.25 0.00 0.00 0.00 0.00 0.00 47.24 79.41 2.70 6.66 99.96 68.03 10 E3a_E4a KnownJunction 0 46.90 3.35 210.78 29.23 28.01 76.21 84.57 66.46 35.21 25.71 0.00 6.90 0.00 0.00 0.00 0.00 0.00 43.69 83.67 6.26 10.93 90.32 54.38 11 E3a_E5a KnownJunction 0 0.00 0.00 2.25 3.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.88 0.00 12 I3 Intron 0 18.29 0.83 23.49 4.16 3.59 3.16 21.31 3.11 4.07 1.73 0.00 1.24 0.00 0.04 0.00 0.04 0.05 1.53 2.25 1.25 0.31 16.23 5.05 13 I3_SR1 SilentIntronRegion 0 13.37 0.45 11.43 1.94 1.69 1.99 20.27 2.09 2.76 0.76 0.00 1.41 0.00 0.02 0.00 0.00 0.09 0.89 1.51 1.21 0.30 13.55 4.83 14 I3_AR2 ActiveIntronRegion 0 21.80 1.46 38.90 5.44 5.08 2.78 27.50 7.48 4.61 3.44 0.00 0.55 0.00 0.21 0.00 0.00 0.00 1.24 0.98 0.66 0.40 22.01 4.40 15 I3_SR2 SilentIntronRegion 0 52.67 2.79 35.66 8.63 9.71 3.41 23.49 7.16 3.78 5.98 0.00 0.44 0.00 0.00 0.00 0.00 0.00 0.73 3.84 0.90 1.19 24.71 9.83 16 I3_AR3 ActiveIntronRegion 0 39.07 2.39 69.59 9.69 8.84 4.50 25.80 5.28 6.73 4.56 0.00 2.43 0.00 0.00 0.00 0.00 0.00 3.16 3.19 1.61 0.35 21.33 6.77 17 I3_SR3 SilentIntronRegion 0 15.40 0.67 20.76 5.88 4.53 5.46 20.81 2.89 5.65 1.58 0.00 0.45 0.00 0.04 0.00 0.20 0.00 2.21 3.27 1.12 0.29 18.56 4.38 18 E4_Aa NovelBoundary 0 31.49 0.00 28.56 4.99 12.73 5.28 31.49 10.02 8.01 3.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.88 4.80 0.00 0.00 17.70 22.71 19 ER4a ExonRegion 0 139.44 1.40 224.90 45.01 11.73 34.28 58.24 65.06 28.93 27.07 0.00 7.00 0.00 0.00 0.00 0.00 0.00 60.78 74.13 5.15 10.14 97.73 59.28 20 E4_Da NovelBoundary 0 14.52 2.96 19.25 4.00 6.79 20.10 3.93 6.41 6.51 2.87 0.00 18.01 0.00 0.00 0.00 0.00 0.00 12.93 8.94 0.00 0.00 25.04 23.73 21 E4a_E5a KnownJunction 0 8.96 0.00 1.83 2.06 0.00 5.79 8.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 14.12 0.00 0.00 2.57 3.41 22 E4a_E7a KnownJunction 0 277.60 0.00 210.34 36.76 23.51 51.50 39.30 74.59 24.28 22.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31.34 51.95 0.00 22.92 89.16 53.69 23 I4 Intron 0 10.65 1.14 11.74 3.97 7.85 6.66 13.69 1.80 3.60 2.39 0.00 2.60 0.00 0.37 0.00 0.83 0.00 9.63 1.34 0.30 0.31 12.23 11.91 24 I4_AR1 ActiveIntronRegion 0 10.97 1.12 13.27 4.43 7.98 6.63 14.17 2.35 4.21 2.86 0.00 3.24 0.00 0.26 0.00 0.98 0.00 9.89 0.58 0.39 0.40 11.75 14.11 25 I4_AR2 ActiveIntronRegion 0 10.78 1.25 7.47 2.80 8.42 7.21 13.63 0.00 1.78 0.96 0.00 0.52 0.00 0.84 0.00 0.36 0.00 9.73 4.33 0.00 0.00 15.36 5.21 26 E5_Aa NovelBoundary 0 30.45 0.00 32.26 6.19 12.56 7.61 31.22 4.64 6.60 4.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.81 9.22 0.00 0.00 0.00 27.15 27 ER5a ExonRegion 0 13.04 0.00 1.08 2.32 8.03 4.23 16.74 0.03 0.00 3.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.77 3.65 1.56 0.00 9.22 0.43 28 E5_Da NovelBoundary 0 10.15 3.35 27.56 5.26 7.30 0.00 19.74 0.00 2.49 7.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.47 8.28 0.00 2.35 35.52 32.61 29 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 I5 Intron 0 24.57 2.75 28.40 7.16 6.62 7.80 32.18 4.59 6.47 3.74 0.00 2.00 0.00 0.10 0.00 0.07 0.00 7.57 6.93 2.82 1.03 27.90 10.01 31 I5_AR1 ActiveIntronRegion 0 26.27 2.33 32.25 6.27 6.99 6.30 28.49 5.25 7.73 4.35 0.00 2.16 0.00 0.17 0.00 0.00 0.00 12.78 9.42 3.18 1.75 26.19 15.98 32 I5_SR1 SilentIntronRegion 0 19.75 2.20 19.87 2.15 3.93 5.05 25.83 4.84 5.37 2.79 0.00 1.41 0.00 0.00 0.00 0.00 0.00 3.05 5.75 2.80 0.58 18.96 5.26 33 I5_AR2 ActiveIntronRegion 0 34.68 5.26 27.56 9.36 8.24 7.93 40.37 3.81 5.70 2.85 0.00 1.79 0.00 0.27 0.00 0.60 0.00 7.82 9.69 2.14 1.33 34.51 6.90 34 I5_AR5 ActiveIntronRegion 0 22.50 2.69 28.83 8.97 6.84 10.21 36.39 4.37 6.13 3.90 0.00 2.18 0.00 0.00 0.00 0.00 0.00 3.90 4.42 2.82 0.41 31.02 6.55 35 I5_SR4 SilentIntronRegion 0 0.00 0.00 2.61 1.36 0.00 7.34 13.01 3.83 3.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.54 0.00 0.00 0.00 11.23 17.11 36 ER6a ExonRegion 0 6.93 0.00 11.29 3.14 3.10 4.24 12.79 3.98 2.84 1.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.23 1.27 1.66 1.28 12.46 5.67 37 E6_Da NovelBoundary 0 38.75 0.00 5.82 5.39 4.16 13.69 30.87 3.70 2.95 5.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.48 4.80 2.94 0.00 15.31 3.67 38 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 I6 Intron 0 12.39 0.35 18.75 5.35 3.85 11.05 12.82 5.47 4.47 2.87 0.00 1.34 0.00 0.08 0.20 0.00 0.00 1.61 1.74 0.73 0.00 23.47 1.71 40 I6_AR1 ActiveIntronRegion 0 9.72 0.19 12.67 5.10 4.12 10.34 12.95 5.52 4.47 2.80 0.00 1.55 0.00 0.11 0.27 0.00 0.00 0.92 1.32 0.88 0.00 22.35 1.63 41 I6_SR1 SilentIntronRegion 0 20.25 0.82 36.62 6.14 3.09 13.19 12.56 5.35 4.50 3.10 0.00 0.74 0.00 0.00 0.00 0.00 0.00 3.63 2.99 0.29 0.00 26.88 1.96 42 E7_Aa NovelBoundary 0 24.08 0.00 30.16 3.03 3.48 21.98 8.83 0.00 1.10 6.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.73 4.42 0.00 0.00 13.90 0.00 43 ER7a ExonRegion 0 93.84 0.79 185.58 32.30 18.55 44.19 56.60 35.84 19.04 21.77 0.00 5.35 0.00 0.00 0.00 0.00 0.00 37.35 40.78 5.00 11.04 56.32 42.93 44 E7_Da NovelBoundary 0 6.89 3.35 11.95 3.60 0.00 0.00 2.12 0.00 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 11.76 19.21 45 E7a_E8a KnownJunction 0 111.58 0.00 167.97 45.42 22.41 48.44 58.47 40.58 19.65 24.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54.93 47.44 8.88 11.49 48.37 55.74 46 I7 Intron 0 8.23 0.75 8.31 2.24 2.55 2.02 7.38 1.89 2.84 0.88 0.00 1.31 0.00 0.10 0.00 0.00 0.48 3.98 3.27 0.31 0.49 15.75 7.11 47 I7_SR1 SilentIntronRegion 0 8.26 0.75 8.33 2.24 2.56 2.02 7.41 1.90 2.84 0.88 0.00 1.31 0.00 0.10 0.00 0.00 0.49 3.99 3.28 0.31 0.49 15.79 7.13 48 ER8a ExonRegion 0 64.44 0.96 176.23 28.00 3.56 26.16 40.90 35.63 16.31 17.24 0.00 1.62 0.00 0.33 0.00 0.00 0.00 37.38 37.26 2.15 10.70 51.98 40.98 49 E8_Da NovelBoundary 0 6.96 0.00 2.96 0.00 0.00 7.78 3.58 2.22 14.35 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 2.07 0.00 0.00 0.00 2.94 4.35 50 E8a_E9a KnownJunction 0 129.28 0.00 216.49 30.87 3.57 34.18 59.40 60.75 20.02 16.82 0.00 0.00 0.00 2.47 0.00 0.00 0.00 67.57 89.23 0.00 11.37 82.30 90.83 51 ER9a ExonRegion 0 150.31 10.18 250.41 49.78 50.69 41.31 79.19 81.12 31.33 22.34 0.00 6.03 0.00 0.30 0.59 0.39 0.21 25.03 42.83 2.87 6.38 120.81 38.37 52 IG39_AR1 ActiveIntergenicRegion 0 2.16 2.68 13.63 4.62 4.58 6.57 4.48 2.29 8.94 3.59 2.00 17.29 1.61 6.90 4.56 1.52 3.88 2.24 3.06 3.03 0.68 1.43 0.00