Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PALLD Gene 0 120.40 110.08 122.96 120.77 141.33 174.24 97.50 120.52 107.55 108.77 162.37 30.38 39.23 55.20 123.85 2.88 91.82 77.36 43.62 93.62 195.31 108.56 80.75 2 333488 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 261509 Transcript 0 0.72 0.48 0.15 0.46 0.00 1.02 0.98 2.02 2.70 1.21 0.55 0.00 0.00 0.00 1.64 0.00 1.08 2.08 0.17 0.91 10.48 3.91 6.21 4 335742 Transcript 1 32.36 83.59 69.01 61.79 55.92 181.41 51.17 92.25 101.89 97.58 215.28 20.22 22.05 89.70 115.24 0.00 123.82 133.10 54.77 124.30 436.04 78.94 104.37 5 393726 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.93 0.00 0.00 7 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.59 0.00 0.00 8 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.00 1.24 0.00 0.00 9 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 0.00 0.00 10 ER3a ExonRegion 0 0.60 0.56 1.23 0.75 0.00 5.01 1.13 0.95 1.85 0.95 0.55 0.00 0.00 0.00 0.00 0.00 3.73 3.13 0.00 0.42 14.38 4.11 7.65 11 E3a_E4a KnownJunction 0 0.00 0.00 1.77 1.76 0.00 2.84 0.00 2.18 2.84 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.01 0.00 3.00 6.30 8.45 20.06 12 ER4a ExonRegion 0 0.00 1.61 0.86 1.83 4.07 5.86 0.00 2.14 3.89 2.88 0.00 0.00 0.00 0.00 0.00 0.00 7.09 1.43 0.00 0.51 20.66 7.90 9.16 13 E4a_E5a KnownJunction 0 0.00 0.00 0.00 2.06 0.00 7.33 0.00 2.46 6.22 3.33 0.00 0.00 0.00 0.00 0.00 0.00 3.74 0.00 0.00 0.00 53.38 0.00 3.93 14 ER5a ExonRegion 0 2.18 0.00 0.00 0.50 0.00 7.34 0.46 1.19 1.91 6.02 0.00 0.00 0.00 0.00 1.09 0.00 5.98 5.09 0.00 1.77 20.33 2.57 9.81 15 E5a_E6a KnownJunction 0 3.41 0.00 0.00 0.00 0.00 10.73 2.25 2.26 3.47 10.77 0.00 0.00 0.00 0.00 4.70 0.00 13.28 1.82 0.00 2.88 20.20 6.12 16.39 16 ER6a ExonRegion 0 1.24 2.71 0.00 1.04 1.82 3.18 1.82 2.90 3.23 4.89 0.00 0.00 0.00 0.00 0.43 0.00 5.41 3.20 0.00 0.40 30.38 2.25 14.33 17 E6a_E7a KnownJunction 0 0.00 7.56 0.00 1.66 0.00 2.78 1.94 0.00 4.05 5.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.91 0.00 0.00 20.63 0.00 4.35 18 ER7a ExonRegion 0 0.76 2.22 0.66 0.35 0.00 1.55 0.12 0.45 2.30 2.96 0.15 0.00 0.00 0.00 1.04 0.00 3.14 2.06 1.14 1.09 18.86 4.31 7.59 19 E8a_E10a KnownJunction 0 0.00 0.00 0.00 2.06 0.00 0.00 0.00 3.94 2.63 4.11 2.47 0.00 0.00 0.00 0.00 0.00 0.00 4.27 0.00 3.26 11.92 11.21 8.02 20 ER8a ExonRegion 0 0.00 0.00 0.00 1.36 0.00 0.00 0.00 3.10 2.06 3.25 1.93 0.00 0.00 0.00 0.00 0.00 2.48 3.70 0.00 4.08 21.49 11.63 10.40 21 ER9a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER10a ExonRegion 0 0.74 0.17 0.78 0.41 0.00 2.87 1.18 2.03 5.48 3.34 0.26 0.00 0.00 0.00 1.21 0.00 1.10 1.25 1.35 0.76 26.50 8.73 13.90 23 E10a_E11a KnownJunction 0 3.26 2.70 0.00 0.00 0.00 2.61 4.37 5.09 4.80 0.00 0.00 0.00 0.00 0.00 5.56 0.00 3.93 3.56 0.00 2.56 13.90 3.12 16.39 24 ER11a ExonRegion 0 1.63 0.85 0.27 1.20 0.00 2.54 2.15 5.01 6.01 2.03 1.44 0.00 0.00 0.00 3.92 0.00 3.54 7.53 0.02 0.58 31.28 6.10 11.20 25 E11a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 I11_AR22 ActiveIntronRegion 0 2.16 1.44 6.55 6.55 12.64 3.19 20.61 8.20 6.80 5.85 0.29 0.00 0.86 0.71 3.79 0.00 5.76 4.23 0.10 7.46 5.88 1.35 5.24 27 E12_Aa NovelBoundary 0 0.00 0.00 4.26 0.00 0.00 28.51 1.85 15.61 18.52 16.52 63.75 0.00 0.00 19.42 10.14 0.00 35.72 77.43 8.85 33.24 115.15 6.18 68.89 28 ER12a ExonRegion 0 3.80 13.65 10.00 5.10 5.96 25.04 6.41 13.75 25.47 30.57 89.84 6.05 12.74 33.48 32.98 0.00 42.62 44.83 18.51 25.51 189.09 21.39 33.62 29 E12a_E13a KnownJunction 0 12.97 51.64 46.24 37.22 40.66 66.61 18.33 45.59 71.12 67.42 149.93 6.30 19.48 76.23 85.42 0.00 66.11 106.16 59.58 87.31 400.87 78.93 100.90 30 ER13a ExonRegion 0 13.76 34.57 42.89 33.39 29.43 50.43 20.52 45.80 68.55 73.98 145.93 15.15 14.07 90.95 79.78 0.00 92.43 94.24 47.78 86.17 399.97 73.96 93.97 31 ER13b ExonRegion 1 40.69 44.47 69.68 51.92 74.20 128.69 52.84 82.02 119.80 99.38 226.87 18.00 18.20 98.84 94.53 0.00 153.76 141.95 76.23 124.93 444.44 118.88 152.00 32 E13a_E14a KnownJunction 1 45.05 59.27 56.80 67.39 81.49 224.19 56.75 95.46 116.78 116.72 198.16 39.46 15.10 102.77 99.02 0.00 128.28 128.01 72.47 127.39 364.55 90.81 129.58 33 E13a_E15a NovelJunction 0 0.00 0.00 1.48 1.53 0.00 0.00 0.00 1.97 1.79 0.00 9.58 0.00 0.00 4.59 0.00 0.00 0.00 2.45 0.00 0.00 8.34 0.00 0.00 34 E13a_E16a NovelJunction 0 3.78 2.63 7.92 1.37 0.00 5.11 0.00 2.18 3.36 2.58 4.84 11.40 0.00 2.47 8.90 0.00 0.00 14.34 4.80 6.01 24.96 0.00 0.00 35 I13_AR3 ActiveIntronRegion 0 6.93 18.04 6.01 17.28 8.55 9.37 9.55 6.82 9.99 7.99 1.86 3.92 15.21 1.81 4.68 4.78 6.67 2.37 8.42 16.03 3.51 4.43 2.48 36 E14_Aa NovelBoundary 0 16.82 58.61 14.78 44.42 28.52 27.60 14.49 19.14 25.49 15.07 9.58 0.00 5.68 3.00 13.60 3.42 0.00 10.28 14.40 12.98 19.40 4.78 0.00 37 ER14a ExonRegion 0 40.96 64.58 63.95 69.96 79.87 157.82 86.81 79.19 129.67 117.91 259.46 23.00 39.37 108.11 113.00 10.60 190.85 101.98 84.24 127.25 422.49 146.12 136.60 38 E14_Da NovelBoundary 0 13.56 55.85 26.61 45.91 26.74 20.78 8.66 25.30 40.25 53.37 14.21 6.30 0.00 18.84 15.20 4.02 7.95 29.43 23.44 30.23 2.97 3.00 3.67 39 E14a_E15a KnownJunction 1 39.12 47.95 80.96 53.27 69.78 104.88 117.69 86.17 120.22 124.77 350.40 23.56 22.73 105.77 80.60 0.00 257.78 100.52 59.48 98.88 446.46 159.15 158.52 40 E14a_E16a NovelJunction 0 0.00 0.00 1.51 1.86 0.00 2.16 6.76 3.70 3.67 0.00 5.16 0.00 21.75 0.00 5.93 0.00 9.16 1.66 4.80 0.00 11.24 2.33 3.67 41 Ix_AR2 ActiveIntronRegion 0 9.19 15.64 4.17 18.21 16.92 24.10 20.66 5.71 13.69 8.61 4.01 3.39 13.03 2.08 5.07 7.51 8.04 4.57 7.31 11.98 4.69 3.52 2.01 42 Ix_SR3 SilentIntronRegion 0 12.70 14.24 7.53 12.95 27.71 26.59 23.93 3.46 11.12 7.70 5.52 0.00 17.76 3.25 2.90 8.92 11.08 7.39 15.93 16.87 13.22 6.25 5.87 43 E15_Aa NovelBoundary 1 3.41 64.92 3.19 27.37 48.90 51.90 30.60 8.75 27.57 18.27 7.48 26.56 34.09 0.00 4.45 6.75 22.07 11.28 17.41 8.56 9.45 2.45 0.00 44 ER15a ExonRegion 0 41.37 92.06 89.86 124.42 131.81 230.60 97.83 113.34 157.18 149.62 402.78 57.63 57.78 120.40 115.51 7.56 235.40 136.84 102.78 158.94 380.02 182.55 159.16 45 E15a_E16a KnownJunction 0 77.42 88.01 92.66 152.66 156.28 338.21 123.21 98.50 136.72 166.06 316.34 48.92 65.90 90.24 96.42 0.00 202.34 137.34 54.87 123.94 323.71 172.68 140.68 46 Ix_AR1 ActiveIntronRegion 0 7.91 6.31 6.15 6.72 18.26 4.83 2.97 2.37 4.05 5.98 6.04 11.24 20.08 7.38 2.70 4.07 8.45 0.68 9.61 7.39 3.13 2.60 2.32 47 E16_Aa NovelBoundary 0 14.89 3.35 1.48 8.76 33.45 0.00 16.65 8.75 15.94 15.20 7.74 32.11 6.82 4.77 18.79 8.54 0.00 4.27 3.67 11.25 0.00 2.76 0.00 48 ER16a ExonRegion 0 85.94 119.68 119.55 130.70 132.98 274.89 134.59 123.57 187.00 169.02 380.05 43.93 44.59 122.26 127.23 6.06 213.02 169.92 96.07 178.62 452.38 198.06 159.77 49 E16a_E17a KnownJunction 1 38.75 95.18 129.68 106.15 144.48 274.33 124.89 109.09 190.74 144.19 317.55 30.01 26.95 124.38 151.06 0.00 169.52 204.12 61.27 162.92 481.49 222.03 164.92 50 Ix_AR1 ActiveIntronRegion 0 5.16 7.47 4.92 17.99 33.22 2.51 17.91 6.70 7.86 14.40 2.03 5.87 17.47 1.80 9.26 7.64 3.88 2.96 3.11 7.96 4.74 1.63 1.70 51 Ix_SR1 SilentIntronRegion 0 20.41 23.22 12.18 31.83 38.76 5.79 21.18 14.92 15.32 19.82 3.61 6.47 10.73 1.92 10.91 2.92 5.37 4.91 7.01 10.30 3.51 2.13 4.31 52 ER17a ExonRegion 0 53.96 102.47 113.82 112.27 108.49 228.14 101.50 103.93 180.51 158.00 272.05 36.41 53.57 121.09 149.40 1.19 175.57 196.72 78.39 168.35 540.98 167.71 134.65 53 E17a_E18a KnownJunction 1 67.79 121.03 158.60 143.37 151.53 363.71 163.09 128.77 163.19 148.28 287.49 56.12 6.66 121.20 177.89 3.76 128.75 269.07 110.59 167.08 551.42 167.96 181.48 54 ER18a ExonRegion 0 88.53 121.47 150.94 161.95 123.80 312.60 133.92 140.64 197.82 156.65 341.40 37.30 38.99 150.72 170.27 6.71 199.56 245.16 84.70 192.44 621.45 185.17 214.93 55 E18_Da NovelBoundary 1 44.75 81.63 137.64 139.91 84.89 274.61 101.40 160.31 177.86 169.42 294.71 18.91 7.63 140.68 164.04 8.03 162.51 245.57 33.70 154.62 468.21 148.00 197.79 56 E18b_E19a KnownJunction 1 84.39 107.81 188.58 171.94 102.29 335.38 133.81 190.75 231.91 210.22 425.06 24.31 38.15 155.40 206.69 0.00 225.81 391.78 105.98 221.98 720.94 266.61 316.10 57 ER18b ExonRegion 1 49.39 95.92 155.83 159.68 87.41 308.08 118.27 177.74 209.56 195.74 393.99 22.37 20.32 152.67 180.84 2.97 210.71 360.62 74.86 173.76 649.36 200.37 272.62 58 ER18c ExonRegion 1 54.61 93.14 156.28 148.92 73.49 323.36 108.12 181.03 214.17 196.89 391.86 29.44 26.58 148.88 185.68 1.78 209.28 377.68 77.30 197.45 676.83 228.21 277.81 59 Ix_AR1 ActiveIntronRegion 0 15.65 20.72 7.59 24.32 19.35 8.03 9.72 7.67 11.28 11.01 6.89 0.62 1.70 6.32 11.05 6.10 10.30 8.89 12.98 14.00 16.97 7.20 8.18 60 Ix_SR2 SilentIntronRegion 0 10.27 25.35 7.06 19.78 22.04 10.88 7.08 6.93 11.92 9.47 7.60 0.00 3.62 11.10 13.76 13.51 13.82 23.22 17.25 14.56 33.14 8.07 4.77 61 Ix_AR2 ActiveIntronRegion 0 8.00 26.66 7.49 13.63 19.62 16.10 7.94 9.03 17.02 9.56 10.09 1.44 4.69 8.12 14.83 10.24 16.50 24.64 22.30 20.80 23.51 3.24 5.87 62 Ix_AR3 ActiveIntronRegion 0 13.47 23.07 12.60 23.54 25.12 18.76 21.84 16.88 20.56 18.93 13.81 7.31 10.14 6.14 12.71 7.24 19.76 14.06 13.93 24.09 19.55 9.81 8.85 63 E19_Aa NovelBoundary 0 27.86 34.07 12.65 26.10 32.17 7.89 23.36 26.08 18.23 10.10 10.27 6.00 19.48 12.42 22.37 0.00 8.98 12.85 8.09 11.57 19.71 3.12 0.00 64 ER19a ExonRegion 1 98.74 99.10 165.75 155.53 114.03 338.83 123.08 190.66 214.62 188.93 437.88 35.80 31.57 129.87 202.75 0.00 210.62 374.95 119.57 232.24 715.02 242.09 272.66 65 ER19b ExonRegion 0 88.17 103.04 159.18 152.21 143.98 284.23 109.19 180.24 214.29 199.26 398.64 55.14 46.49 143.59 219.08 3.56 216.14 327.13 119.12 226.17 688.11 200.18 248.10 66 E19_Db NovelBoundary 0 0.00 46.64 11.41 21.21 23.77 14.65 25.92 9.24 8.36 12.03 9.63 11.85 13.31 7.36 29.05 0.00 13.00 2.11 4.71 5.62 10.75 0.00 0.00 67 E19b_E20a KnownJunction 1 137.06 132.41 215.16 160.95 149.07 459.39 125.95 238.07 282.55 277.00 521.92 52.37 34.74 123.67 283.70 3.85 289.20 352.89 287.73 261.55 796.31 272.80 343.50 68 ER20a ExonRegion 0 111.60 115.57 162.32 142.63 134.53 358.14 113.53 181.70 235.71 221.40 431.02 46.37 64.67 138.22 233.31 7.05 266.80 307.98 103.72 219.02 674.92 176.33 247.19 69 E20a_E21a KnownJunction 0 197.52 185.56 224.39 200.71 246.77 441.00 138.67 253.88 296.52 262.41 519.45 62.42 100.48 228.21 437.73 0.00 393.45 469.83 219.87 334.86 789.39 252.34 410.26 70 ER21a ExonRegion 0 81.47 103.82 160.38 159.19 155.15 296.02 111.69 172.68 197.10 189.05 406.28 38.84 76.20 143.44 236.32 3.39 237.98 305.14 99.98 202.65 640.21 163.68 203.37 71 E21a_E22a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 72 E21a_E23a KnownJunction 1 80.31 185.49 150.79 143.04 121.14 452.58 128.78 217.40 209.08 194.75 406.05 48.32 33.93 159.40 227.33 0.00 262.74 248.31 86.21 260.08 718.16 136.49 178.58 73 Ix Intron 0 4.93 12.80 2.42 5.38 10.67 14.61 9.65 7.68 5.49 2.83 3.20 0.00 16.90 4.84 3.79 1.02 4.37 4.87 1.05 14.12 3.65 2.10 0.00 74 Ix_AR1 ActiveIntronRegion 0 5.25 12.85 1.54 6.14 8.39 16.71 7.60 8.66 3.05 2.32 1.89 0.00 17.89 3.51 3.12 1.94 4.12 3.10 0.00 14.13 1.17 2.03 0.00 75 ER22a ExonRegion 0 0.14 0.09 0.16 0.00 0.00 0.16 0.12 0.08 1.32 0.20 0.25 0.00 0.00 0.00 2.40 0.00 0.07 0.00 0.00 0.09 0.24 2.13 0.13 76 E22a_E23a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 77 ER23a ExonRegion 0 299.85 252.77 274.64 267.73 328.62 335.23 213.49 258.42 190.14 202.88 227.30 60.40 79.77 73.39 246.92 5.20 122.50 75.10 62.47 152.69 177.87 197.59 103.98