Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SNX25 Gene 0 55.64 58.60 42.19 33.17 42.87 70.15 35.36 27.89 22.66 34.58 266.21 511.32 424.01 328.57 246.47 350.31 352.61 22.82 18.19 22.37 23.10 67.71 49.48 2 264694 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 296779 Transcript 0 11.26 3.35 4.82 0.00 0.00 5.00 7.77 0.00 1.42 0.00 8.05 12.30 17.86 9.54 0.00 7.60 17.86 0.00 0.00 0.00 0.00 0.00 0.00 4 264693 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.97 29.83 8.22 6.49 9.77 1.42 0.04 0.00 0.00 0.00 0.00 0.00 0.00 5 393554 Transcript 0 2.33 1.22 1.84 1.64 1.07 3.67 1.72 1.73 1.85 1.61 32.28 29.87 22.04 41.90 11.02 52.90 37.96 3.51 1.59 1.49 3.31 5.21 4.70 6 ER1a ExonRegion 1 3.56 4.29 4.42 0.38 2.65 8.59 2.44 1.81 2.29 4.17 58.77 31.37 41.28 134.98 32.33 78.86 109.03 10.63 1.49 6.48 7.59 5.08 11.91 7 E1a_E2a KnownJunction 1 0.00 8.55 11.09 5.23 4.33 24.87 2.16 6.61 2.95 9.89 96.87 35.86 58.28 170.35 44.01 181.58 126.88 24.79 3.58 8.69 13.34 5.33 11.44 8 I1_AR3 ActiveIntronRegion 0 11.10 3.46 14.25 4.29 3.67 4.66 6.63 2.59 3.09 2.43 2.32 34.31 35.82 0.73 12.53 24.85 37.50 3.03 6.54 2.35 0.00 0.00 1.44 9 I1_AR4 ActiveIntronRegion 0 12.33 4.04 11.85 5.05 3.82 2.59 10.13 2.24 2.66 2.91 5.39 50.33 47.92 1.21 21.77 23.12 33.86 2.48 3.55 3.15 1.95 0.00 2.00 10 ER2a ExonRegion 1 17.11 14.86 9.49 11.91 9.48 36.09 15.44 9.88 8.33 20.41 210.00 209.19 186.61 317.18 87.28 282.81 288.89 28.91 22.63 13.94 21.13 39.71 25.12 11 E2a_E4b KnownJunction 1 26.67 11.25 14.49 20.48 15.45 28.34 23.98 14.25 19.76 14.32 282.07 298.15 287.32 401.26 125.35 537.55 360.73 32.87 19.39 15.53 35.89 63.07 41.91 12 E2a_E5a NovelJunction 0 3.19 3.35 4.35 0.00 3.82 9.37 1.90 0.00 0.00 0.00 10.37 13.65 21.10 21.96 0.00 3.50 18.89 2.57 0.00 3.26 0.00 2.51 0.00 13 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER4a ExonRegion 0 4.66 2.44 3.68 3.27 2.14 7.34 3.44 3.46 3.71 3.21 64.56 59.75 44.09 83.80 22.05 105.81 75.92 7.02 3.19 2.98 6.61 10.42 9.40 15 ER4b ExonRegion 1 15.40 12.46 28.61 24.24 9.67 34.88 19.44 24.61 21.24 27.18 344.93 279.33 242.32 352.00 126.16 418.02 441.92 33.91 22.55 18.91 32.67 52.46 51.92 16 E4a_E5a KnownJunction 0 28.60 21.44 36.43 33.56 7.72 54.80 16.34 33.27 28.21 33.39 333.35 240.98 276.44 399.26 239.94 479.87 562.22 25.66 9.22 43.21 27.49 80.58 54.21 17 ER5a ExonRegion 0 13.76 28.28 29.53 28.18 18.58 57.36 32.43 15.92 24.50 33.15 348.35 441.63 491.15 413.89 203.93 510.93 535.28 46.39 24.62 26.56 33.65 58.87 61.36 18 E5a_E6a KnownJunction 1 24.00 34.99 24.27 18.31 15.62 78.25 35.33 12.40 30.24 31.24 406.89 832.02 975.42 536.94 197.42 583.86 627.96 27.90 30.87 20.26 46.70 54.38 86.81 19 ER6a ExonRegion 0 27.93 25.96 33.22 24.30 20.66 62.50 28.16 25.32 28.57 37.65 362.95 616.54 679.45 464.59 234.88 581.15 589.02 51.13 34.09 29.35 48.28 79.70 69.10 20 E6a_E7a KnownJunction 1 18.15 9.54 43.49 18.18 31.58 44.80 26.76 21.89 30.35 33.74 200.05 330.41 280.66 148.69 40.42 305.48 254.79 14.84 0.00 15.92 31.75 24.62 23.30 21 ER7a ExonRegion 0 23.58 35.54 39.02 28.04 45.00 99.46 48.45 29.26 32.55 31.81 375.34 847.11 868.05 491.03 220.41 623.69 554.46 29.69 34.05 25.44 48.48 88.39 73.13 22 E7a_E8a KnownJunction 0 40.90 35.13 27.41 26.90 10.87 97.84 47.25 18.61 25.98 22.43 270.81 815.97 555.16 491.03 267.14 514.65 435.62 39.51 8.66 14.89 29.96 62.52 71.71 23 ER8a ExonRegion 0 21.83 43.58 23.31 23.45 18.69 51.74 22.36 17.14 22.75 29.68 250.40 715.50 403.14 342.02 175.00 335.41 409.06 28.25 8.96 15.40 27.53 59.13 51.08 24 E8_Da NovelBoundary 0 28.45 9.80 7.60 9.56 3.82 0.00 6.76 0.00 6.05 1.29 7.69 101.43 77.75 33.96 34.61 85.96 71.15 2.45 4.61 9.40 0.00 5.76 29.36 25 E8a_E9a KnownJunction 0 30.67 107.35 17.36 18.91 23.09 59.57 19.96 19.18 26.10 29.41 272.86 690.83 314.43 306.14 121.64 234.98 374.47 9.45 4.80 18.47 20.94 73.17 38.84 26 E8a_E10a NovelJunction 0 3.78 0.00 0.00 0.00 0.00 0.00 4.33 0.00 1.22 2.90 9.69 6.00 0.00 4.77 0.00 8.72 17.77 0.00 0.00 5.05 2.97 10.72 4.35 27 ER9a ExonRegion 0 44.05 93.90 32.50 23.47 37.32 79.83 34.86 21.51 19.75 25.85 240.76 615.80 346.46 270.94 160.58 277.29 314.64 21.08 7.87 18.15 19.08 59.00 47.61 28 E9a_E10a KnownJunction 0 57.42 69.99 40.21 41.92 65.20 61.50 31.84 29.00 24.68 28.85 229.69 790.91 445.43 315.85 204.46 251.47 227.96 17.74 8.09 7.86 7.91 113.34 30.65 29 ER10a ExonRegion 0 44.90 105.90 44.28 38.76 55.99 75.93 38.86 28.27 23.54 39.39 252.52 803.55 614.03 308.15 196.17 266.93 238.99 12.20 9.67 31.88 14.68 82.83 38.28 30 E10a_E11a KnownJunction 0 57.34 44.86 52.87 31.66 15.37 53.38 30.69 26.08 27.31 38.44 295.23 930.15 594.60 341.16 247.11 364.35 353.44 25.91 22.12 42.95 23.85 65.64 51.47 31 E10a_E12a NovelJunction 0 9.63 0.00 0.00 1.90 3.74 0.00 0.00 2.46 3.30 1.05 5.37 12.00 20.45 11.77 21.51 4.36 22.63 1.62 0.00 0.00 0.00 7.90 0.00 32 ER11a ExonRegion 0 51.54 48.23 41.34 31.06 47.61 73.11 40.22 25.00 20.60 38.61 310.75 777.83 542.85 386.86 231.64 383.85 391.11 14.27 14.15 27.38 22.44 64.46 53.54 33 E11a_E12a KnownJunction 0 60.90 65.71 40.00 44.85 97.71 100.57 50.43 30.19 16.58 49.32 308.34 857.83 527.24 361.71 249.21 402.12 358.86 6.14 16.57 45.83 13.78 49.05 75.72 34 E11a_E13a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.42 6.30 6.82 23.66 4.45 11.62 13.00 0.00 0.00 0.00 0.00 0.00 0.00 35 ER12a ExonRegion 0 55.14 62.67 36.51 36.93 52.70 77.08 42.00 21.75 19.58 43.46 296.70 702.26 492.13 352.31 247.49 417.92 456.70 23.85 17.57 27.82 26.63 62.49 59.96 36 E12a_E13a KnownJunction 0 54.75 70.78 27.41 29.27 45.25 72.69 21.55 26.16 16.23 24.07 285.34 532.97 432.60 366.71 278.88 325.30 391.68 24.83 8.47 22.88 24.40 74.40 46.18 37 ER13a ExonRegion 0 45.77 60.96 33.25 33.50 38.28 69.91 34.62 23.79 19.49 31.69 311.35 552.85 413.72 402.17 250.21 369.24 448.10 26.24 13.46 25.32 29.84 57.85 75.46 38 E13a_E14a KnownJunction 0 77.57 74.86 47.54 25.70 76.15 98.92 56.57 19.63 17.10 34.03 328.35 670.27 313.13 375.72 330.06 433.48 394.02 40.67 7.15 15.02 13.59 65.21 93.64 39 ER14a ExonRegion 0 90.03 61.42 44.19 28.78 60.72 90.11 59.94 26.67 17.91 34.12 334.87 472.10 328.34 411.04 302.32 383.33 401.81 17.85 15.70 16.57 19.66 65.32 64.92 40 E14_Da NovelBoundary 0 0.00 18.81 1.83 2.06 12.65 0.00 23.80 2.34 1.30 4.14 5.37 69.62 120.45 14.72 18.17 22.73 53.30 0.00 0.00 3.26 0.00 2.82 0.00 41 E14a_E15a KnownJunction 0 117.21 57.62 44.94 36.69 80.65 59.97 37.23 26.99 22.11 26.70 319.98 549.33 483.09 401.03 252.18 377.34 315.47 18.61 4.80 18.02 5.37 59.15 62.57 42 E14a_E16a KnownJunction 0 11.26 3.35 4.82 0.00 0.00 5.00 7.77 0.00 1.42 0.00 8.05 12.30 17.86 9.54 0.00 7.60 17.86 0.00 0.00 0.00 0.00 0.00 0.00 43 E14a_E17a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.26 0.00 0.00 5.26 0.00 13.15 2.41 15.45 0.00 16.08 0.00 0.00 0.00 0.00 2.45 0.00 44 I14_AR1 ActiveIntronRegion 0 6.97 5.00 1.80 1.87 3.98 9.53 9.47 4.25 0.89 3.29 11.70 50.35 81.97 12.39 11.83 72.82 40.51 1.85 0.00 1.06 0.00 3.35 6.00 45 ER15a ExonRegion 0 92.28 85.67 45.71 34.46 62.04 88.90 40.17 27.50 19.57 30.75 317.41 420.54 351.98 376.35 289.60 368.15 385.48 20.08 14.32 24.90 20.57 60.73 69.87 46 E15a_E16a KnownJunction 0 106.54 111.30 48.11 44.18 67.74 63.32 38.86 11.62 21.64 32.66 237.59 455.85 333.26 376.30 285.43 245.23 287.98 12.48 3.48 29.98 32.12 46.66 56.43 47 I15_SR2 SilentIntronRegion 0 10.79 19.81 1.31 5.12 2.42 3.90 4.94 2.08 1.20 0.99 5.95 47.01 48.18 8.70 12.86 9.97 12.86 0.49 0.00 2.59 0.22 2.24 2.87 48 E16_Aa NovelBoundary 0 23.78 30.32 1.77 1.43 0.00 2.16 6.14 7.76 2.69 4.54 13.16 30.16 26.46 22.43 23.98 11.62 21.79 0.00 0.00 2.56 6.30 5.82 0.00 49 ER16a ExonRegion 0 103.76 82.91 66.56 49.17 77.42 109.97 53.90 27.63 23.24 33.72 315.83 524.34 411.57 411.47 383.58 462.87 390.26 23.86 16.25 28.42 24.30 81.91 66.87 50 E16a_E17a KnownJunction 0 180.18 66.30 76.82 58.57 128.35 188.98 72.56 51.67 23.44 55.34 395.26 534.47 442.83 522.58 455.53 490.98 476.48 23.79 19.20 32.73 25.08 77.83 83.91 51 ER17a ExonRegion 0 149.39 100.19 96.71 65.46 82.03 108.06 59.44 45.17 30.47 41.43 401.87 531.94 511.98 467.67 450.26 544.52 482.67 24.79 29.29 39.44 27.30 91.83 77.71 52 E17a_E18a KnownJunction 0 147.29 148.59 103.96 66.26 80.56 104.71 44.21 40.58 34.69 35.65 266.80 528.02 571.72 420.69 477.66 599.33 340.25 28.23 32.10 30.55 45.78 110.47 81.78 53 ER18a ExonRegion 0 136.89 126.44 91.80 65.27 87.17 128.18 53.47 45.80 33.10 55.25 348.59 481.28 582.83 410.09 458.64 550.38 484.67 35.39 37.80 27.45 34.76 98.77 69.95 54 E18a_E19a KnownJunction 0 250.41 163.06 127.38 82.44 99.32 220.04 64.12 65.64 38.43 69.92 413.10 575.89 557.92 602.16 722.79 1100.57 564.00 35.73 61.84 38.80 25.95 175.19 185.24 55 E19_Aa NovelBoundary 0 36.45 17.43 6.56 11.39 18.17 7.33 20.18 6.28 3.18 10.99 4.95 12.75 23.86 14.01 10.88 30.42 36.47 1.78 0.00 3.26 2.66 5.69 3.84 56 ER19a ExonRegion 0 116.51 86.98 79.14 63.07 81.84 132.83 55.91 48.82 31.72 49.45 374.33 544.57 546.69 410.97 492.04 491.02 484.15 29.03 47.18 29.77 31.09 109.89 82.20 57 E19a_E20a KnownJunction 0 120.39 106.03 52.98 42.25 56.03 150.65 68.32 23.86 19.88 37.12 289.44 508.67 506.14 272.82 454.66 270.44 304.44 22.97 21.74 17.64 30.09 91.48 28.26 58 E19a_E21a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.00 37.81 6.33 7.42 5.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 E20_Aa NovelBoundary 0 7.56 18.48 8.57 12.32 20.03 0.00 8.61 4.23 11.60 11.09 4.84 51.62 25.49 10.95 17.18 14.95 4.77 3.61 0.00 3.00 8.46 0.00 3.50 60 ER20a ExonRegion 0 67.68 54.79 48.51 36.17 47.10 59.98 34.89 42.09 26.94 40.20 137.78 425.80 348.68 185.47 293.85 161.99 144.15 7.17 13.78 16.62 8.09 77.10 20.41 61 E20_Da NovelBoundary 1 41.64 27.23 11.35 13.95 24.87 31.18 23.98 22.02 10.16 13.51 14.79 125.74 196.58 63.51 91.48 15.12 25.62 0.00 4.05 5.11 0.00 20.57 3.41 62 E21_Aa NovelBoundary 0 17.93 26.31 15.17 26.24 0.00 7.84 27.56 6.65 5.15 11.44 25.32 49.97 74.67 10.01 38.20 60.50 56.85 0.00 0.00 12.40 2.97 8.45 19.46 63 ER21a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.93 21.84 10.11 5.56 13.73 2.84 0.07 0.00 0.00 0.00 0.00 0.00 0.00