Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GALNT7 Gene 0 45.35 44.27 27.96 41.09 54.51 29.73 47.38 26.16 28.90 51.53 257.88 240.48 252.42 172.31 93.08 180.31 154.03 11.07 35.93 38.12 50.13 99.49 45.94 2 265000 Transcript 1 25.29 35.81 12.77 22.92 31.93 18.19 38.74 15.57 20.86 36.71 292.42 196.88 217.15 203.05 55.98 226.34 195.65 12.87 40.89 30.76 73.45 92.50 56.80 3 458613 Transcript 1 4.68 11.13 1.31 10.19 17.23 9.42 14.15 6.05 12.11 21.96 35.37 36.95 50.45 42.82 6.48 26.91 28.58 2.88 6.75 18.81 27.28 37.77 17.41 4 ER1a ExonRegion 1 1.55 1.49 2.23 1.66 4.67 9.88 5.10 4.36 4.17 8.42 77.97 4.41 15.78 46.37 19.85 102.15 68.91 6.95 20.47 12.84 40.78 14.36 23.52 5 E1_Da NovelBoundary 0 3.78 0.00 1.21 0.00 3.90 0.00 0.00 2.55 3.15 5.24 21.27 6.30 0.00 26.96 8.90 22.30 22.16 0.00 17.04 8.95 3.15 4.90 0.00 6 E1a_E2a KnownJunction 1 0.00 0.00 0.00 1.93 3.31 0.00 4.50 4.85 6.89 18.16 212.53 19.81 0.00 103.18 30.29 105.53 148.29 10.49 13.46 14.76 128.50 16.47 15.45 7 E1a_E3a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.79 0.00 0.00 5.36 0.00 4.02 4.21 0.00 0.00 6.07 0.00 0.00 0.00 8 ER2a ExonRegion 1 7.05 9.81 4.43 7.67 12.63 16.72 22.36 8.92 16.84 24.16 265.14 138.97 131.66 208.23 49.38 253.54 209.57 21.04 44.23 28.42 103.11 75.74 56.94 9 E2a_E3a KnownJunction 1 7.04 12.04 3.58 11.92 12.65 12.04 29.72 9.90 15.60 17.03 249.12 183.06 202.10 192.89 41.29 223.53 217.02 7.71 18.26 31.06 67.09 73.73 31.58 10 ER3a ExonRegion 1 6.32 15.61 4.09 8.18 19.47 14.36 30.63 8.93 25.74 22.32 266.81 202.86 223.65 204.29 37.61 187.96 201.16 12.56 34.77 36.58 91.18 66.90 43.87 11 E3_Ab KnownBoundary 0 9.19 25.92 7.57 14.68 38.79 33.67 43.54 14.09 23.64 26.81 234.85 178.11 219.47 217.73 60.57 137.49 169.89 9.99 21.55 24.42 88.34 65.52 64.28 12 ER3b ExonRegion 0 10.33 15.37 10.53 21.09 26.15 23.29 48.43 13.64 21.20 25.20 288.90 209.88 244.61 236.89 72.05 228.71 192.95 8.67 26.39 34.50 49.11 109.01 40.20 13 E3a_E4a KnownJunction 0 0.00 24.86 13.81 25.90 23.94 50.65 43.77 14.70 34.46 31.94 277.23 208.87 299.17 210.31 57.23 278.22 161.66 10.32 29.65 46.34 39.78 133.55 35.60 14 ER4a ExonRegion 1 11.13 21.28 13.94 21.44 31.48 27.66 48.11 18.51 28.32 34.34 317.48 320.55 297.76 227.69 56.70 214.20 171.27 7.17 31.85 28.26 65.37 110.67 55.08 15 E4a_E5a KnownJunction 0 6.74 8.75 12.45 21.24 43.72 16.64 43.63 11.42 17.62 42.15 270.96 307.90 232.13 177.76 110.27 169.44 106.87 7.88 17.13 38.22 73.02 114.51 60.27 16 E4a_E7a NovelJunction 0 3.33 0.00 0.00 0.00 0.00 0.00 2.03 0.00 0.00 0.00 7.58 26.41 0.00 9.77 0.00 7.18 4.21 2.57 0.00 3.26 0.00 5.94 0.00 17 ER5a ExonRegion 0 12.06 14.44 12.24 17.16 29.43 15.61 31.44 14.43 16.10 34.58 303.90 260.31 223.13 212.29 61.00 228.85 168.14 7.34 24.49 22.10 86.77 98.47 61.12 18 E5a_E6a KnownJunction 1 3.11 6.18 1.24 6.63 8.66 4.66 9.94 4.89 4.48 14.94 51.96 23.56 53.24 50.15 4.45 20.51 34.60 3.98 4.52 11.95 41.45 47.88 25.78 19 E5a_E7a KnownJunction 1 16.30 3.22 6.74 3.53 0.00 8.01 21.07 5.71 5.03 19.61 269.07 250.73 156.81 223.38 29.54 208.75 115.75 0.00 16.09 5.88 73.76 65.83 64.88 20 I5_SR1 SilentIntronRegion 0 10.08 21.85 8.27 7.55 8.03 18.52 15.39 7.53 4.61 13.24 30.86 33.09 23.77 29.62 7.67 22.47 35.19 4.92 6.37 23.98 3.92 18.22 3.29 21 I5_SR2 SilentIntronRegion 0 13.30 13.46 3.10 6.17 7.61 4.24 9.53 4.22 4.63 7.83 29.90 38.57 17.51 20.47 2.43 17.49 18.63 1.43 11.91 16.07 3.11 8.77 2.97 22 E6_Aa NovelBoundary 0 7.04 6.25 3.96 13.85 4.33 19.36 22.96 11.09 9.81 6.61 31.48 24.61 6.82 17.13 4.45 19.57 8.51 1.58 9.04 8.88 2.78 17.64 8.11 23 ER6a ExonRegion 0 8.41 15.17 2.47 11.14 22.99 13.72 21.90 4.48 13.84 24.64 70.03 67.69 68.04 64.37 16.03 59.72 51.68 4.01 13.46 32.40 31.39 50.04 30.12 24 E6a_E8a KnownJunction 1 7.19 23.15 0.00 11.19 37.27 19.31 24.78 5.13 20.17 22.86 19.48 56.57 80.51 56.74 5.44 27.43 28.05 3.52 9.04 30.87 36.26 53.15 13.74 25 ER7a ExonRegion 1 12.11 6.99 6.07 7.08 16.51 11.25 21.65 3.84 5.45 20.54 248.59 232.56 143.73 207.20 39.98 189.78 153.10 6.80 38.22 7.32 55.92 61.72 53.29 26 E7a_E8a KnownJunction 1 13.34 8.81 6.83 5.23 15.28 22.43 19.21 4.44 6.13 17.70 137.88 136.69 85.38 188.83 22.87 201.14 159.89 8.33 4.80 6.52 31.26 76.42 26.97 27 E8_Aa NovelBoundary 0 22.97 17.56 1.54 3.50 3.74 2.78 3.93 2.42 5.93 8.65 2.47 31.51 0.00 2.47 0.00 10.68 8.23 6.47 22.40 19.81 5.25 0.00 0.00 28 ER8a ExonRegion 1 21.84 41.52 7.61 16.98 32.19 22.49 41.17 13.28 19.59 35.51 273.81 232.36 221.23 236.81 48.27 202.36 180.32 15.35 39.07 35.83 56.76 94.31 71.07 29 E8_Da NovelBoundary 0 16.00 35.39 4.23 21.84 53.23 11.75 48.49 16.43 19.18 39.06 254.12 117.04 187.16 230.74 81.34 172.01 129.22 5.72 50.35 16.87 86.43 84.26 65.39 30 E8a_E8b KnownJunction 0 0.00 0.00 1.51 11.79 0.00 0.00 0.00 9.69 9.95 25.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E8_Db NovelBoundary 0 16.00 0.00 2.93 0.00 17.32 7.95 24.11 0.00 2.92 0.00 5.05 6.30 0.00 2.47 0.00 4.36 4.30 0.00 4.80 2.62 0.00 0.00 0.00 32 E8b_E9a KnownJunction 1 22.89 30.26 3.67 27.77 39.39 31.52 62.18 18.24 33.88 24.74 324.29 141.35 255.34 289.19 41.91 190.12 229.36 9.41 32.75 38.86 96.25 106.18 55.66 33 ER8b ExonRegion 1 14.82 28.47 6.13 29.44 50.30 15.04 48.19 22.82 26.93 41.98 287.62 146.34 256.08 276.43 66.15 196.75 165.04 7.02 41.41 28.94 93.88 83.34 66.37 34 ER8c ExonRegion 1 11.36 23.01 4.84 29.98 43.80 19.01 46.55 21.65 32.11 43.10 313.33 153.35 220.68 262.00 50.24 175.04 186.59 6.52 34.87 25.98 98.82 98.69 58.58 35 ER9a ExonRegion 1 16.62 39.21 9.18 21.93 23.75 20.26 40.74 20.23 27.15 41.69 327.95 201.16 233.18 247.95 53.81 228.49 210.85 20.04 37.43 38.68 68.88 105.88 67.69 36 E9b_E10a KnownJunction 0 27.19 52.75 9.37 23.07 43.80 10.90 51.23 18.44 22.71 31.72 322.56 219.67 302.25 198.07 51.80 171.84 185.88 14.05 48.94 32.02 56.09 122.71 44.56 37 ER9b ExonRegion 1 25.40 42.71 11.64 24.53 29.43 11.00 52.30 19.88 22.23 34.41 306.36 220.80 274.37 207.89 44.97 178.33 203.01 14.78 41.41 34.04 55.09 131.26 49.92 38 ER10a ExonRegion 0 42.97 48.39 17.12 29.67 42.25 33.72 58.73 16.20 28.95 42.12 374.10 237.17 312.78 252.42 69.10 271.86 232.19 19.25 51.24 40.37 75.90 110.07 87.78 39 E10a_E11a KnownJunction 1 20.08 39.47 21.44 43.35 53.14 25.16 42.26 25.63 30.44 57.89 407.63 203.02 296.73 281.24 52.04 354.27 264.70 14.47 71.15 41.16 83.03 123.32 80.58 40 E11_Aa NovelBoundary 0 0.00 32.36 3.67 2.06 0.00 0.00 2.21 2.05 3.76 1.61 5.11 12.60 0.00 7.18 0.00 15.89 16.46 0.00 4.61 15.02 2.97 2.69 4.35 41 ER11a ExonRegion 0 38.25 71.28 24.57 36.11 38.30 20.86 46.81 21.42 30.24 60.86 351.34 271.84 291.97 225.41 71.48 354.19 245.73 24.54 78.57 40.96 103.40 110.53 93.14 42 E11a_E12a KnownJunction 0 39.04 84.66 23.54 32.56 42.28 10.16 40.45 24.60 24.45 52.62 378.99 198.06 252.09 197.60 76.89 302.74 270.97 14.67 58.26 34.64 75.86 114.08 62.06 43 ER12a ExonRegion 0 41.10 76.22 19.34 42.40 41.86 26.80 74.00 19.87 29.89 53.63 424.94 266.61 266.10 245.07 75.97 250.46 274.67 17.52 70.92 49.41 81.08 121.72 71.80 44 E12a_E13a KnownJunction 0 71.64 81.24 18.04 41.45 67.15 39.98 70.04 21.56 36.34 67.58 430.11 318.40 384.07 242.92 96.55 367.94 273.40 22.97 50.82 63.28 75.86 181.13 113.36 45 E13_Aa NovelBoundary 0 0.00 5.85 1.36 21.01 28.95 5.45 24.69 19.67 7.47 10.45 6.84 19.96 21.91 2.47 5.69 3.76 17.67 5.35 0.00 27.93 0.00 0.00 0.00 46 ER13a ExonRegion 0 71.01 61.37 44.73 62.86 81.64 39.03 59.00 38.93 37.51 70.08 252.83 292.75 313.22 153.41 131.86 153.38 132.51 8.51 32.95 45.51 30.32 115.70 36.26