Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	ETFDH	Gene	0	72.33	78.63	50.71	95.11	46.36	83.13	36.77	29.14	46.04	57.52	61.15	113.94	54.40	75.72	80.32	57.37	69.30	27.54	21.09	45.41	50.32	51.57	46.42
2	307738	Transcript	0	76.28	63.88	28.37	81.67	41.27	74.14	38.07	20.94	36.58	57.98	68.18	129.83	62.19	87.36	75.49	76.65	75.57	35.32	23.23	48.31	67.15	45.37	82.42
3	355672	Transcript	0	1.56	0.00	0.00	1.03	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.06	0.00	0.00	0.00	0.00	0.00
4	417188	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	ER1a	ExonRegion	0	13.77	13.75	3.77	8.75	7.59	24.85	12.27	3.41	4.78	10.68	14.05	1.76	1.55	23.56	15.99	16.40	23.31	15.26	7.87	10.57	19.95	10.58	17.18
6	E1_Ab	KnownBoundary	1	6.96	21.38	7.92	23.91	42.19	21.24	19.12	6.94	25.00	19.56	39.90	13.20	6.82	42.91	23.36	7.60	80.04	7.75	17.88	29.91	33.73	7.72	18.87
7	ER1b	ExonRegion	1	1.67	6.22	4.75	10.20	15.00	15.34	10.47	3.56	14.93	13.80	28.99	2.62	15.49	51.87	29.19	7.30	66.32	4.31	10.04	14.06	24.64	8.33	12.55
8	E1a_E2a	KnownJunction	1	0.00	0.00	4.61	5.69	3.31	10.90	3.62	4.11	14.96	12.49	32.48	0.00	14.12	55.74	39.80	10.17	64.14	4.15	3.76	6.07	23.23	17.08	11.87
9	E1a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	I1	Intron	0	9.60	19.15	11.77	28.06	9.46	7.36	8.84	5.67	6.57	9.83	3.02	17.31	11.18	5.60	4.29	1.89	2.55	5.50	3.87	12.15	4.72	4.83	7.08
11	I1_AR1	ActiveIntronRegion	0	3.54	5.21	4.31	14.20	6.06	5.60	5.47	2.79	3.44	4.88	1.71	9.30	2.28	5.79	7.24	4.10	4.55	11.31	2.82	10.89	14.75	4.31	14.46
12	I1_AR2	ActiveIntronRegion	0	28.29	49.55	38.58	67.78	20.19	14.64	14.68	12.29	11.30	27.12	9.01	36.09	24.25	11.63	9.44	4.32	5.34	11.58	12.47	30.42	5.09	7.50	13.11
13	I1_SR2	SilentIntronRegion	1	24.14	51.17	37.37	91.22	25.75	20.73	21.64	20.87	19.77	30.54	3.73	43.31	20.62	7.82	1.92	3.29	1.43	7.79	6.47	17.75	0.71	10.92	7.49
14	E2_Aa	NovelBoundary	0	21.19	108.73	43.17	111.74	24.02	47.87	25.04	17.54	25.03	43.11	17.53	25.51	40.58	4.53	4.45	0.00	0.00	1.91	11.58	20.77	0.00	13.72	3.24
15	I1_AR3	ActiveIntronRegion	1	11.72	24.26	9.23	17.72	5.64	9.17	0.99	7.72	4.19	6.06	0.00	9.59	18.76	0.70	1.24	0.64	1.89	2.44	2.16	8.28	0.00	1.56	0.73
16	ER2a	ExonRegion	0	14.25	43.96	44.19	74.34	33.10	55.56	31.08	21.29	25.53	35.77	45.65	72.59	36.79	61.32	41.50	50.36	49.63	15.29	14.39	37.94	24.49	45.26	35.01
17	E2_Da	NovelBoundary	1	10.15	34.66	39.24	64.93	17.15	21.01	12.81	18.81	5.53	8.17	2.53	26.11	40.09	0.00	0.00	0.00	8.04	0.00	3.86	3.26	0.00	4.78	3.50
18	E2a_E3a	KnownJunction	1	13.93	48.81	16.91	46.88	12.05	109.71	30.47	18.81	22.48	25.04	32.64	78.03	13.96	52.92	55.50	19.65	73.02	10.65	16.57	23.01	25.02	28.72	15.37
19	I2	Intron	1	12.50	19.04	9.47	26.92	18.89	24.84	13.16	5.20	7.95	12.07	1.11	27.48	10.25	4.49	2.36	0.43	1.43	1.46	1.84	9.20	1.58	9.31	8.04
20	I2_SR1	SilentIntronRegion	0	1.37	5.25	0.00	2.61	5.18	18.94	9.33	3.33	0.00	0.00	1.25	8.88	9.97	4.93	1.32	1.92	0.00	1.19	0.00	12.36	0.00	1.35	3.79
21	I2_AR2	ActiveIntronRegion	1	15.82	23.16	12.28	34.14	22.99	26.73	14.35	5.77	10.32	15.64	1.08	33.07	10.41	4.39	2.68	0.00	1.85	1.55	2.38	8.35	2.05	11.68	9.33
22	E3_Aa	NovelBoundary	1	18.30	24.47	16.88	39.89	16.72	31.06	12.85	10.56	12.24	17.35	2.68	70.07	0.00	12.60	0.00	0.00	0.00	2.11	0.00	9.14	20.45	0.00	0.00
23	ER3a	ExonRegion	0	34.37	68.66	47.03	72.83	21.66	96.36	30.07	16.61	32.92	46.97	67.54	132.10	48.07	81.92	54.81	31.10	70.22	26.33	18.09	41.87	61.39	52.39	39.05
24	E3_Da	KnownBoundary	0	50.38	78.74	38.73	88.17	53.90	71.61	47.12	24.40	41.55	48.03	54.80	137.29	46.26	81.64	56.12	28.20	69.57	24.91	41.51	53.69	85.50	53.27	57.11
25	E3a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER3b	ExonRegion	0	47.30	78.27	31.98	85.92	37.41	47.53	32.40	23.70	37.10	53.62	60.47	133.15	43.55	84.19	60.63	46.16	68.51	19.84	26.65	46.85	82.39	51.58	59.99
27	E3_Ab	KnownBoundary	0	71.27	93.21	41.48	72.19	48.90	39.35	27.25	32.04	27.60	46.77	63.91	199.41	61.20	67.99	93.70	66.31	90.14	13.02	9.51	41.99	85.38	66.07	48.32
28	ER3c	ExonRegion	0	59.59	67.90	40.18	83.18	45.07	86.09	47.12	32.31	43.45	54.83	75.52	141.53	44.14	97.43	50.94	63.70	70.75	39.77	22.53	42.47	76.38	51.10	54.22
29	E3b_E4a	KnownJunction	1	65.86	58.15	38.44	82.84	36.08	68.99	40.45	32.90	48.76	75.21	54.28	171.36	13.80	115.66	72.56	67.33	74.43	32.96	22.31	51.01	59.68	56.33	39.44
30	ER4a	ExonRegion	0	65.43	50.42	24.19	87.91	43.53	94.42	42.64	22.11	36.53	57.96	72.70	112.46	49.02	106.38	63.54	89.42	95.48	38.96	32.79	44.71	70.44	58.34	72.09
31	E4a_E5a	KnownJunction	0	102.24	52.75	27.02	88.63	46.52	98.24	49.90	15.28	39.93	60.73	60.07	117.64	95.12	81.99	107.30	96.64	72.00	44.69	16.94	52.80	65.73	48.80	113.11
32	E4a_E5b	KnownJunction	0	3.11	0.00	0.00	2.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.11	0.00	0.00	0.00	0.00	0.00
33	ER5a	ExonRegion	0	79.29	60.62	26.11	70.45	39.88	76.67	31.90	23.83	32.71	59.59	84.01	138.71	47.89	95.89	58.53	87.16	86.20	41.43	26.10	45.29	53.31	35.74	74.15
34	E5_Ab	KnownBoundary	1	75.64	64.73	30.51	66.66	38.29	109.82	32.06	34.67	31.83	59.47	74.70	155.15	25.49	92.18	46.85	82.12	77.14	36.23	7.91	40.65	58.81	33.80	83.74
35	ER5b	ExonRegion	0	58.35	44.07	27.38	62.41	40.18	78.47	28.28	26.34	28.50	58.53	59.95	140.42	35.28	88.70	62.05	74.97	80.55	43.82	23.72	47.35	50.82	47.58	64.87
36	E5a_E6a	KnownJunction	0	78.90	49.20	26.88	80.64	46.86	79.05	20.09	23.66	31.45	55.82	45.91	85.83	81.65	104.01	69.35	87.93	60.87	33.29	24.85	36.88	37.56	48.07	34.74
37	ER6a	ExonRegion	0	65.91	57.17	33.02	80.52	45.21	90.35	35.54	24.04	40.20	52.80	68.57	125.72	51.35	104.94	58.99	99.34	81.97	28.62	25.32	48.04	52.89	38.30	59.52
38	E6_Da	NovelBoundary	0	12.74	15.13	17.15	31.90	15.70	28.62	11.97	7.23	13.34	3.98	0.00	6.15	0.00	2.47	4.45	4.36	0.00	3.11	9.60	14.25	2.59	2.69	0.00
39	E6a_E7a	KnownJunction	0	92.91	66.63	40.21	68.92	44.14	112.32	58.03	29.61	40.48	65.95	61.86	128.89	54.38	110.95	99.02	120.05	80.13	36.81	19.01	47.94	47.45	38.58	79.05
40	ER7a	ExonRegion	0	71.00	68.71	34.38	86.68	39.24	104.60	47.75	31.21	46.42	68.35	74.80	185.40	59.38	97.28	81.04	77.60	90.88	34.10	24.66	61.12	61.54	57.46	69.68
41	E7a_E8a	KnownJunction	1	70.98	71.83	57.77	104.22	40.41	113.97	38.82	21.97	44.24	57.00	77.60	219.37	45.61	121.73	106.56	66.99	69.85	27.53	17.69	52.99	58.26	54.19	61.63
42	ER8a	ExonRegion	0	60.60	68.05	53.34	100.77	51.86	95.58	41.03	25.66	44.19	56.33	65.81	165.47	52.95	111.70	74.69	71.52	105.89	22.33	25.14	57.22	78.74	63.14	69.06
43	E8_Da	NovelBoundary	1	10.59	21.44	6.59	12.02	0.00	42.48	16.78	0.00	18.89	10.61	4.74	55.37	6.82	2.41	0.00	0.00	0.00	2.11	0.00	8.95	2.35	5.88	3.16
44	E8a_E9a	KnownJunction	0	69.12	44.07	62.83	87.23	27.76	82.17	24.82	25.55	19.27	51.63	67.12	110.74	47.72	96.71	56.86	24.35	77.98	16.13	25.88	30.04	69.99	67.85	42.68
45	I8	Intron	0	5.59	14.24	6.49	22.26	10.46	14.52	12.50	6.40	14.01	11.54	4.32	15.37	9.60	3.83	2.65	3.92	3.35	4.02	3.24	17.28	3.23	11.42	6.26
46	I8_SR1	SilentIntronRegion	0	5.60	14.28	6.51	22.32	10.49	14.57	12.53	6.42	14.05	11.57	4.32	15.42	9.63	3.83	2.66	3.93	3.36	4.03	3.25	17.33	3.24	11.45	6.28
47	E9_Aa	NovelBoundary	0	10.82	17.69	23.21	19.84	31.41	38.27	26.85	8.30	18.14	11.52	2.63	13.95	13.64	7.30	4.45	0.00	13.09	3.44	4.14	25.50	5.50	7.35	11.61
48	ER9a	ExonRegion	0	126.26	103.44	67.63	114.67	42.25	84.86	39.36	31.23	56.15	66.10	90.64	127.84	65.30	97.82	106.78	93.52	104.80	29.96	23.78	53.69	87.09	70.46	53.65
49	E9a_E10a	KnownJunction	0	118.54	103.27	59.76	93.00	68.68	125.72	49.68	20.17	46.01	66.75	74.76	146.90	60.06	96.77	98.03	46.23	85.27	12.73	20.24	30.74	72.46	79.05	22.54
50	I9	Intron	0	2.98	10.66	2.17	13.06	6.72	12.03	8.98	6.25	8.92	10.91	1.36	17.27	11.64	3.87	2.65	3.53	2.18	2.96	2.53	19.22	2.14	12.39	4.27
51	I9_SR1	SilentIntronRegion	0	2.81	11.29	2.47	14.30	7.17	12.75	9.15	6.42	9.73	11.72	1.20	18.03	10.99	3.47	2.80	3.78	1.63	2.79	2.55	19.37	1.69	13.16	4.20
52	I9_AR1	ActiveIntronRegion	0	5.56	4.82	1.04	11.32	8.62	3.39	7.81	9.25	6.89	9.10	3.44	16.41	19.80	10.20	1.21	2.63	8.75	5.22	1.15	14.94	5.53	11.56	4.23
53	I9_AR2	ActiveIntronRegion	0	2.43	9.32	0.00	1.15	0.00	12.61	8.35	1.48	2.11	3.92	1.11	9.92	11.07	2.19	2.35	1.70	1.89	2.64	3.65	21.95	3.79	4.78	5.05
54	I9	Intron	0	7.00	17.50	4.19	21.98	8.25	17.85	9.70	6.39	15.98	13.04	4.14	11.03	10.36	4.15	4.38	5.36	4.21	10.06	7.30	23.91	4.88	10.57	6.29
55	I9_AR1	ActiveIntronRegion	0	6.66	28.13	3.97	11.86	7.14	10.00	4.85	8.37	7.74	9.93	9.12	17.64	7.52	5.70	3.05	4.13	5.67	6.60	6.71	26.94	5.96	10.92	4.83
56	I9_SR1	SilentIntronRegion	0	7.04	16.49	4.21	23.01	8.37	18.65	10.19	6.20	16.81	13.36	3.66	10.40	10.65	4.01	4.52	5.49	4.08	10.41	7.37	23.65	4.79	10.55	6.44
57	E10_Aa	NovelBoundary	0	21.26	81.70	5.26	29.73	6.62	24.30	19.30	8.38	17.01	9.75	2.05	6.30	6.49	2.47	0.00	0.00	0.00	6.67	0.00	32.21	2.90	10.47	8.71
58	ER10a	ExonRegion	0	119.65	124.01	88.67	115.90	68.49	98.83	56.56	32.07	55.92	68.57	75.59	111.09	115.75	99.42	78.27	54.13	94.25	26.93	24.47	52.06	66.49	79.88	52.11
59	E10_Da	KnownBoundary	1	159.07	163.13	144.35	172.97	80.39	135.83	95.35	60.34	76.62	84.53	73.54	109.09	142.20	67.34	87.27	73.66	111.36	32.42	46.12	68.77	45.65	102.20	59.07
60	ER10b	ExonRegion	1	181.83	188.97	113.37	198.91	95.63	167.99	66.05	53.87	86.78	112.26	77.49	164.66	135.09	92.11	140.59	85.51	105.39	34.99	23.94	77.50	35.26	98.52	57.12
61	E10b_E11a	KnownJunction	0	208.33	256.07	139.41	162.65	91.77	210.45	97.29	44.11	66.43	130.52	74.18	194.31	117.36	103.77	140.92	75.88	110.43	25.74	13.65	64.56	24.59	82.97	50.96
62	ER11a	ExonRegion	1	137.13	187.98	95.70	172.57	89.50	142.86	58.16	56.41	78.52	102.44	73.96	206.30	128.55	82.91	144.90	70.19	98.22	33.96	29.16	57.28	48.57	79.52	59.26
63	E11a_E12a	KnownJunction	0	152.69	137.02	108.16	170.54	44.82	131.80	42.71	62.51	95.37	100.73	100.76	153.35	130.84	143.51	215.71	104.67	103.79	33.12	72.00	64.49	121.33	97.67	118.74
64	ER12a	ExonRegion	0	122.29	129.07	78.00	142.10	77.56	114.79	52.86	46.37	77.13	81.19	87.82	161.48	76.41	98.68	163.71	72.60	73.39	44.58	35.13	62.65	85.76	65.27	63.72
65	E12a_E13a	KnownJunction	0	63.57	106.63	61.32	106.15	70.20	44.18	39.00	25.42	61.63	70.00	50.64	61.82	25.81	64.51	137.09	50.59	76.58	27.11	4.42	59.25	45.65	37.35	34.83
66	ER13a	ExonRegion	0	50.51	49.89	58.60	102.93	41.81	55.10	22.86	31.84	55.27	52.21	50.57	66.80	31.28	43.52	77.93	28.65	32.68	17.22	12.68	40.93	20.06	42.63	17.16
67	IG14	Intergenic	0	13.55	19.53	7.79	28.60	20.56	17.61	11.02	4.95	9.43	12.04	4.54	24.84	7.48	5.48	6.81	3.17	0.00	3.34	6.80	9.08	1.41	10.69	3.13
68	IG14_AR1	ActiveIntergenicRegion	0	16.06	22.84	11.09	40.69	24.37	18.93	9.65	7.04	13.41	17.12	4.69	27.75	9.63	4.52	7.81	2.71	0.00	4.19	5.80	9.69	1.34	15.20	3.57
69	IG14_AR2	ActiveIntergenicRegion	0	7.82	12.02	0.00	0.00	11.87	14.91	14.68	0.00	0.00	0.00	4.29	18.45	2.45	7.98	4.54	4.39	0.00	1.37	9.42	7.86	1.63	0.00	2.17