Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DCLK2 Gene 0 21.80 149.07 92.74 139.38 90.00 284.51 103.42 102.79 120.06 136.27 0.02 0.00 0.00 0.08 0.00 0.00 0.08 164.44 63.36 170.75 15.34 14.04 16.03 2 394010 Transcript 0 0.00 1.36 0.34 0.08 0.00 11.51 2.80 5.09 1.99 2.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.90 7.08 6.03 1.84 3.47 3.10 3 296550 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 302176 Transcript 0 0.00 5.64 5.88 13.08 2.75 188.27 3.49 13.70 67.81 18.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.37 0.04 3.84 0.01 0.00 0.00 5 411937 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ER1a ExonRegion 0 2.77 18.98 17.63 16.68 11.77 55.97 17.70 26.38 35.44 46.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 95.78 28.25 71.46 8.48 2.05 6.14 7 E1a_E2a KnownJunction 0 9.56 119.12 71.14 90.60 55.01 216.01 104.49 96.11 141.95 164.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 210.79 74.07 190.79 40.16 9.19 23.47 8 ER2a ExonRegion 0 13.26 150.81 67.41 103.83 108.40 338.53 139.94 124.81 151.07 168.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 191.59 91.07 265.71 22.00 18.34 22.73 9 E2a_E3a KnownJunction 0 6.67 240.81 103.72 171.34 99.24 322.26 153.47 167.62 205.55 197.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 319.61 178.26 394.43 31.20 24.13 30.82 10 I2_SR1 SilentIntronRegion 0 6.59 28.63 12.50 18.96 22.57 5.71 15.07 27.70 10.18 11.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.42 3.41 11.33 0.08 0.29 1.12 11 ER3a ExonRegion 0 13.64 210.11 97.73 148.42 116.12 304.78 175.82 148.40 199.94 203.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 260.50 113.37 292.67 29.35 25.14 23.01 12 E3a_E4a KnownJunction 0 20.45 227.20 83.11 135.48 97.71 445.82 249.17 147.17 198.49 202.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 208.10 69.55 298.69 28.29 36.19 19.12 13 ER4a ExonRegion 0 28.59 256.15 92.06 147.34 135.52 484.43 206.56 128.80 161.00 182.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 281.82 95.53 271.61 19.49 22.24 19.98 14 E4a_E5a KnownJunction 0 0.00 8.49 8.87 9.46 0.00 162.12 2.25 4.07 50.55 17.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.78 0.00 2.62 0.00 0.00 0.00 15 E4a_E6a KnownJunction 0 59.94 331.72 112.74 142.01 167.40 477.11 285.73 111.64 114.58 163.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 284.00 86.12 343.49 15.81 34.54 16.56 16 ER5a ExonRegion 0 0.00 5.46 5.79 13.66 8.24 162.09 4.52 16.13 73.67 20.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.10 0.12 3.09 0.04 0.00 0.00 17 E5a_E6a KnownJunction 0 0.00 2.96 2.99 16.12 0.00 240.60 3.71 20.91 79.19 17.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.22 0.00 5.82 0.00 0.00 0.00 18 ER6a ExonRegion 0 21.81 211.66 92.82 117.04 146.86 444.65 185.12 123.47 156.08 176.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 197.96 91.34 255.30 13.94 20.59 17.25 19 E6a_E7a KnownJunction 0 20.37 145.70 59.76 57.67 96.10 225.27 81.13 73.15 94.13 91.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 110.22 33.79 170.08 8.71 14.02 29.79 20 E6a_E7b KnownJunction 0 6.74 95.31 44.06 43.55 59.85 200.57 61.30 55.70 45.80 54.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 89.75 48.38 108.60 3.09 2.51 8.11 21 ER7a ExonRegion 0 17.46 141.84 60.96 71.55 89.64 257.65 85.06 83.40 101.59 98.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 143.66 50.97 179.25 9.37 12.50 32.30 22 ER7b ExonRegion 0 17.46 188.25 76.86 115.26 108.03 397.40 148.91 127.02 153.02 158.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 201.99 71.80 279.90 15.36 18.35 18.52 23 E7a_E8a KnownJunction 0 10.96 237.46 93.37 132.42 150.85 483.24 182.88 143.80 166.03 183.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 186.95 47.44 316.97 17.24 25.84 22.11 24 ER8a ExonRegion 0 22.64 244.22 97.73 143.80 144.22 446.91 196.76 127.78 169.45 196.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 170.74 65.31 300.58 9.52 16.29 25.92 25 E8a_E9a KnownJunction 0 20.97 259.56 88.20 112.91 168.85 313.46 261.00 132.63 178.67 217.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 167.14 84.24 303.35 9.14 5.82 19.29 26 ER9a ExonRegion 0 20.84 216.05 92.83 153.75 170.05 381.08 213.98 154.04 190.87 223.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 192.26 94.24 286.32 13.60 15.81 25.52 27 E9a_E10a KnownJunction 0 18.00 276.66 117.12 229.74 211.12 529.41 213.79 165.08 234.75 250.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 229.90 87.72 330.07 17.92 20.15 22.96 28 ER10a ExonRegion 0 30.88 182.43 98.49 146.21 140.39 463.49 187.42 154.24 228.18 248.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 241.92 102.06 320.69 20.27 20.00 28.14 29 E10a_E11a KnownJunction 0 29.34 172.27 103.22 159.19 147.28 459.22 222.14 155.79 238.57 271.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 262.23 166.88 290.89 31.57 28.47 19.21 30 ER11a ExonRegion 0 24.87 156.25 99.02 143.35 144.64 438.19 174.84 153.69 207.01 222.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 276.52 108.89 294.61 25.38 21.49 29.83 31 E11a_E12a KnownJunction 0 16.97 180.76 101.59 161.02 185.06 498.86 232.21 123.06 183.74 199.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 230.02 118.97 283.79 8.65 34.41 6.49 32 ER12a ExonRegion 0 29.17 226.96 108.30 165.84 133.55 465.98 191.20 153.61 194.43 200.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 282.54 119.59 292.90 21.84 23.03 28.29 33 E12_Da NovelBoundary 0 15.11 51.83 24.57 65.96 4.33 8.18 29.90 45.63 36.49 17.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40.79 8.09 39.18 0.00 0.00 7.51 34 E12a_E13a KnownJunction 0 23.56 211.28 88.17 142.51 167.83 405.28 168.92 121.41 147.57 171.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 169.88 72.66 193.03 22.30 6.06 18.35 35 I12 Intron 0 7.25 52.25 40.19 58.88 23.98 12.32 23.03 38.70 17.46 22.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.61 7.98 40.66 2.03 3.84 3.48 36 I12_AR2 ActiveIntronRegion 0 10.58 41.52 26.65 40.89 28.76 22.62 30.45 29.24 10.50 15.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.87 0.00 45.04 0.00 4.17 0.00 37 I12_AR3 ActiveIntronRegion 0 8.39 63.37 49.21 71.86 28.52 13.25 25.99 47.03 21.61 27.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33.32 10.43 47.28 2.66 4.46 4.51 38 E13_Aa NovelBoundary 0 12.37 69.26 26.52 66.49 17.66 8.01 22.92 50.52 25.81 15.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.57 3.67 43.66 0.00 0.00 0.00 39 ER13a ExonRegion 0 23.82 164.62 93.30 135.75 131.73 463.62 156.28 118.51 166.76 183.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 224.57 105.24 236.22 24.33 23.13 19.16 40 E13_Da NovelBoundary 0 19.78 55.45 28.27 51.21 30.14 24.82 45.05 44.40 30.47 20.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.56 28.05 54.39 5.44 8.63 4.35 41 E13a_E14a KnownJunction 0 20.00 172.54 109.43 119.40 110.53 477.11 146.00 122.44 187.38 183.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 263.56 100.43 206.32 29.28 18.49 19.04 42 I13 Intron 0 5.21 32.74 9.22 24.49 15.18 14.51 31.29 18.72 14.98 14.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.96 7.81 41.89 2.99 4.85 4.06 43 I13_SR1 SilentIntronRegion 0 5.22 32.76 9.23 24.50 15.19 14.52 31.30 18.73 14.98 14.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.98 7.81 41.91 2.99 4.85 4.06 44 E14_Aa NovelBoundary 0 0.00 22.43 18.48 25.40 8.57 29.19 37.32 23.74 14.67 13.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66.28 18.92 44.23 4.94 3.12 15.71 45 ER14a ExonRegion 0 15.54 146.06 118.89 128.70 78.78 396.54 146.30 143.96 200.31 201.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 285.60 115.59 259.03 29.49 26.57 27.70 46 E14_Da NovelBoundary 0 0.00 23.88 4.38 18.78 12.22 30.21 48.27 8.26 5.38 9.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55.17 18.07 11.51 4.94 3.00 4.10 47 E14a_E15a KnownJunction 0 7.11 191.48 122.47 122.83 89.22 473.59 181.46 168.40 221.12 240.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 225.88 114.26 206.07 20.51 27.86 11.69 48 I14 Intron 0 2.50 11.49 5.54 14.89 11.28 21.64 32.03 13.68 14.59 11.67 0.00 0.60 0.00 0.00 0.00 0.00 0.00 28.74 9.94 34.44 1.49 5.97 3.22 49 I14_SR1 SilentIntronRegion 0 0.74 6.26 1.93 2.60 8.62 21.69 24.31 6.09 4.25 6.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.98 7.08 23.10 3.08 5.66 0.00 50 I14_AR1 ActiveIntronRegion 0 2.87 12.54 6.30 16.82 12.31 22.34 34.18 15.34 16.41 12.68 0.00 0.71 0.00 0.00 0.00 0.00 0.00 30.35 10.83 37.01 1.38 6.39 3.73 51 E15_Aa NovelBoundary 0 9.93 12.83 2.60 15.98 7.64 75.98 54.81 10.68 13.80 12.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44.56 8.94 44.17 5.44 5.51 4.10 52 ER15a ExonRegion 0 5.44 119.05 99.57 102.81 79.51 485.55 132.72 131.43 167.17 201.08 0.00 0.00 0.00 0.60 0.00 0.00 0.00 222.98 109.40 208.48 24.84 19.45 25.20 53 E15_Da NovelBoundary 0 10.22 11.25 5.29 36.96 6.45 62.24 30.52 20.74 30.82 26.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70.60 11.86 57.91 2.53 5.57 22.11 54 E15a_E16a KnownJunction 0 6.59 95.71 97.28 106.05 91.77 327.77 90.00 102.19 161.54 179.84 0.00 0.00 0.00 2.47 0.00 0.00 0.00 203.16 65.23 153.27 18.97 6.25 19.55 55 I15 Intron 0 6.79 9.53 7.75 10.92 11.35 42.15 35.07 15.37 14.62 14.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60.22 18.54 51.95 7.28 8.12 8.69 56 I15_AR1 ActiveIntronRegion 0 6.78 9.48 3.19 9.47 11.70 33.13 25.06 17.26 12.87 9.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58.35 14.85 50.22 8.35 4.86 8.56 57 I15_SR1 SilentIntronRegion 0 6.80 9.56 8.69 11.24 11.31 44.09 37.19 15.02 15.01 15.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60.75 19.34 52.42 7.08 8.80 8.74 58 E16_Aa NovelBoundary 0 16.23 6.71 28.00 24.57 20.71 47.98 36.30 28.67 26.79 13.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 74.28 17.88 57.21 6.12 10.23 4.01 59 ER16a ExonRegion 0 27.17 131.92 93.49 107.84 71.79 324.61 99.78 129.49 174.00 193.29 0.00 0.00 0.00 0.17 0.00 0.00 0.00 274.98 150.09 239.77 22.09 27.10 24.25 60 E16_Da NovelBoundary 0 29.56 5.92 21.85 31.10 4.33 64.91 43.99 24.44 43.52 34.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 90.33 13.65 110.58 5.62 0.00 19.89 61 E16a_E18a KnownJunction 0 3.78 54.99 40.86 18.41 11.38 92.62 37.67 17.91 43.32 92.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 74.28 40.94 88.84 2.90 3.12 10.07 62 I16 Intron 0 11.61 65.35 31.44 84.94 50.14 108.06 62.83 57.96 55.09 52.73 0.00 0.00 0.00 0.00 0.00 0.00 0.12 74.82 23.85 88.33 7.24 12.43 10.18 63 I16_SR1 SilentIntronRegion 0 4.61 3.84 4.95 7.28 17.74 52.28 37.49 14.49 13.76 18.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39.28 26.66 47.95 9.81 5.59 12.11 64 I16_AR1 ActiveIntronRegion 0 11.01 13.46 11.21 24.51 31.21 90.07 57.15 37.08 38.64 44.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52.35 20.41 77.74 6.07 12.81 10.02 65 I16_SR2 SilentIntronRegion 0 15.52 12.20 23.28 34.07 44.60 113.39 62.89 57.04 44.67 38.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32.95 6.37 78.01 0.00 26.04 8.81 66 I16_AR2 ActiveIntronRegion 0 19.05 13.07 21.01 32.71 45.49 122.60 60.15 51.36 43.93 36.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32.20 9.56 81.15 0.00 22.92 6.29 67 I16_SR3 SilentIntronRegion 0 16.75 10.04 27.23 31.89 41.43 112.36 68.81 53.79 50.78 44.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50.16 18.29 96.60 3.86 14.86 3.79 68 I16_AR3 ActiveIntronRegion 0 40.03 17.52 20.87 31.27 24.95 42.55 43.42 44.99 54.71 49.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 80.32 25.11 98.56 2.01 8.46 11.31 69 I16_AR4 ActiveIntronRegion 0 8.12 10.79 20.22 31.47 22.24 73.57 41.28 38.84 47.93 41.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 95.63 26.44 112.50 6.47 9.78 9.63 70 I16_SR4 SilentIntronRegion 0 11.47 96.09 39.85 118.09 61.91 120.97 68.48 68.51 62.41 58.95 0.00 0.00 0.00 0.00 0.00 0.00 0.19 81.12 24.83 87.68 8.04 12.78 10.91 71 ER17a ExonRegion 0 0.00 1.36 0.34 0.08 0.00 11.51 2.80 5.09 1.99 2.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.90 7.08 6.03 1.84 3.47 3.10 72 I17 Intron 0 14.66 87.40 56.59 123.90 56.65 152.95 64.30 69.49 66.52 72.56 0.09 0.00 0.00 0.09 0.00 0.00 0.00 107.32 30.49 79.91 9.24 11.44 10.31 73 I17_AR1 ActiveIntronRegion 0 11.08 86.84 47.54 122.72 56.65 103.81 49.77 63.20 46.53 45.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 132.72 26.88 63.53 7.09 15.33 10.23 74 I17_SR1 SilentIntronRegion 0 14.78 87.49 56.91 124.05 56.70 154.54 64.78 69.74 67.17 73.42 0.09 0.00 0.00 0.09 0.00 0.00 0.00 106.67 30.62 80.46 9.31 11.34 10.32 75 E18_Aa NovelBoundary 0 5.63 48.02 53.93 81.51 22.92 60.53 23.23 42.31 48.93 85.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 96.17 31.91 50.94 13.84 3.12 10.93 76 ER18a ExonRegion 0 40.06 227.03 160.86 259.14 123.89 340.03 108.55 131.68 126.18 148.98 0.07 0.00 0.00 0.19 0.00 0.00 0.24 148.19 50.23 141.99 14.84 16.43 15.40