Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HSPA4L Gene 0 4.37 34.41 32.53 73.67 21.36 151.74 89.87 14.66 47.00 40.26 210.31 105.29 130.39 114.54 59.26 52.50 95.07 25.30 30.74 93.57 47.04 16.16 17.39 2 296464 Transcript 0 3.64 17.08 21.01 52.33 13.95 60.19 46.62 9.31 28.09 21.15 46.45 37.96 46.11 26.88 31.17 13.05 22.65 7.62 13.18 35.68 6.30 7.28 4.95 3 438626 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.69 0.00 0.00 2.64 0.00 0.00 2.89 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1b ExonRegion 1 0.30 3.93 13.44 10.14 1.93 50.29 16.06 2.06 11.77 11.18 102.92 7.53 8.35 59.67 17.08 34.07 48.74 32.47 19.30 50.00 52.59 4.09 15.54 6 E1a_E2a KnownJunction 1 0.00 21.31 11.29 9.89 0.00 179.44 53.35 4.89 13.51 15.98 136.19 13.95 50.00 98.59 28.18 21.62 63.49 29.80 24.75 76.51 97.24 5.45 11.78 7 I1_AR1 ActiveIntronRegion 0 1.11 1.59 15.79 3.27 0.00 1.19 1.62 0.87 0.71 0.00 1.95 3.87 0.00 1.51 0.00 0.52 0.00 0.91 7.71 1.49 0.00 0.36 0.00 8 ER2a ExonRegion 1 0.91 18.41 14.26 13.46 8.07 248.07 61.86 3.55 17.85 16.95 171.99 28.74 14.72 114.25 35.02 44.74 84.00 34.60 35.26 70.87 103.38 7.36 28.35 9 E2a_E3a KnownJunction 1 3.78 9.01 14.49 20.71 8.57 200.51 54.23 9.04 16.98 18.94 216.11 69.62 46.10 140.74 43.64 57.68 113.42 45.85 40.75 101.50 93.96 11.70 25.87 10 ER3a ExonRegion 1 1.16 15.48 20.76 25.26 2.62 108.06 35.87 7.62 30.61 20.89 224.63 50.94 25.45 150.39 31.44 57.78 111.57 52.30 39.08 100.56 101.34 12.71 18.12 11 E3a_E4a KnownJunction 1 0.00 10.98 11.12 31.00 8.57 143.33 47.52 6.08 31.28 23.96 209.95 71.87 20.45 173.52 42.28 65.11 141.37 71.05 32.85 78.55 89.02 14.27 19.97 12 ER4a ExonRegion 1 0.00 14.02 13.35 31.22 10.07 107.72 56.32 10.09 30.88 28.64 254.72 52.52 51.09 174.97 33.94 70.24 130.61 60.10 41.90 93.15 103.20 18.06 37.48 13 E4a_E5a KnownJunction 1 0.00 24.73 8.99 38.82 23.51 162.69 60.41 7.76 51.82 35.30 263.96 83.43 72.07 170.35 39.19 63.15 131.56 21.80 50.45 112.30 104.53 11.27 34.23 14 ER5a ExonRegion 1 0.00 17.49 11.60 44.06 9.12 117.31 53.28 7.52 42.17 24.99 237.82 77.63 78.42 163.48 25.88 45.92 121.04 50.20 30.80 88.02 88.85 7.42 30.72 15 E5a_E6a KnownJunction 1 0.00 23.48 22.21 57.83 7.05 223.17 79.27 9.28 50.12 20.76 284.28 125.89 60.22 168.52 53.03 63.32 119.59 63.88 36.99 123.62 89.89 15.86 44.90 16 ER6a ExonRegion 1 0.81 31.19 12.83 36.82 13.98 148.87 75.45 6.95 42.60 31.39 235.14 86.46 106.44 144.58 23.30 48.80 116.17 33.69 24.58 104.68 62.49 8.85 27.55 17 E6a_E7a KnownJunction 1 0.00 19.01 12.98 33.53 16.47 147.13 81.66 6.49 35.62 25.28 212.84 139.40 129.05 101.60 17.06 34.52 111.17 19.73 12.61 88.72 43.31 8.57 42.25 18 ER7a ExonRegion 0 2.64 21.09 24.16 40.63 10.54 132.98 73.63 9.40 36.10 31.83 234.73 113.49 135.51 122.92 38.02 49.01 94.90 20.77 28.24 94.37 42.01 16.53 19.87 19 E7a_E8a KnownJunction 0 0.00 26.44 34.15 26.94 4.24 201.53 78.30 19.72 32.00 31.91 239.59 73.07 144.63 78.35 36.47 37.60 92.75 19.65 22.40 115.50 56.28 16.29 8.45 20 ER8a ExonRegion 0 2.53 30.77 26.04 36.87 6.95 130.72 71.49 13.40 30.80 25.05 265.81 115.38 189.06 133.85 39.22 50.45 130.66 22.24 19.86 81.40 56.84 22.54 19.68 21 E8a_E9a KnownJunction 0 2.96 24.07 18.89 34.99 16.21 85.97 81.30 9.82 35.45 24.98 270.38 101.88 174.83 146.98 37.09 76.65 168.21 16.00 31.91 79.07 40.22 21.55 22.02 22 E9_Aa NovelBoundary 0 0.00 0.00 6.42 14.55 0.00 6.81 17.14 4.72 7.55 2.95 8.63 26.11 20.29 10.18 4.45 0.00 7.48 2.49 18.64 12.02 3.03 0.00 0.00 23 ER9a ExonRegion 0 0.14 23.65 23.73 52.77 16.65 126.85 86.69 8.27 43.90 39.67 299.66 138.71 185.90 154.29 51.17 69.41 144.57 26.71 34.79 104.24 63.11 14.28 13.50 24 E9a_E10a KnownJunction 0 0.00 54.66 27.02 58.67 29.80 152.24 83.60 2.30 47.42 47.36 239.32 141.05 162.65 182.47 46.60 42.64 131.28 30.05 17.69 84.82 52.08 26.88 28.00 25 E10_Aa NovelBoundary 0 0.00 7.83 4.52 24.64 0.00 4.77 12.19 2.30 4.54 10.50 16.58 6.90 13.64 7.24 0.00 0.00 8.42 5.02 11.95 6.20 0.00 0.00 0.00 26 ER10a ExonRegion 0 2.91 40.77 23.29 48.48 22.51 169.72 87.13 8.74 54.97 37.39 297.27 126.93 189.44 141.80 38.45 49.17 113.68 24.99 42.18 99.80 60.30 11.41 17.84 27 E10a_E11a KnownJunction 0 7.56 50.85 36.99 53.61 23.51 153.43 150.46 12.98 44.91 35.67 318.71 143.75 171.74 172.17 45.24 76.05 99.77 37.76 64.10 125.53 56.59 21.86 10.84 28 E11_Aa NovelBoundary 0 0.00 3.35 19.48 5.79 11.88 5.45 20.31 4.64 7.32 5.67 12.32 12.45 6.33 0.00 0.00 0.00 13.00 5.06 4.42 6.52 0.00 0.00 0.00 29 ER11a ExonRegion 0 2.51 32.84 37.93 75.47 19.51 156.76 118.21 14.63 56.44 41.17 287.70 160.09 192.71 175.51 47.07 78.52 103.36 29.45 43.07 110.21 44.17 12.56 16.52 30 E11_Da NovelBoundary 0 0.00 3.22 2.28 9.19 0.00 5.74 16.87 0.00 12.79 1.32 16.69 19.36 14.45 5.42 0.00 10.68 0.00 2.57 8.38 21.41 0.00 0.00 11.95 31 E11a_E12a KnownJunction 0 0.00 32.95 24.90 60.37 18.85 182.00 104.71 18.65 43.23 36.48 251.01 182.76 227.58 157.04 40.18 79.47 116.88 18.16 24.47 113.20 72.16 20.08 16.39 32 I11_AR1 ActiveIntronRegion 0 1.12 5.58 10.39 12.73 3.77 4.66 23.07 2.95 6.84 4.15 12.28 8.71 21.52 5.94 2.31 3.91 6.21 5.69 7.30 9.53 2.68 2.58 1.39 33 I11_AR3 ActiveIntronRegion 0 0.95 3.28 4.65 11.11 1.20 6.45 19.13 1.15 3.60 0.72 10.80 9.04 4.81 6.37 3.94 4.51 4.81 3.29 1.43 12.60 4.14 1.85 3.35 34 E12_Aa NovelBoundary 0 6.15 19.14 12.57 21.58 4.33 18.57 26.94 3.49 5.27 2.44 32.17 18.01 0.00 9.65 0.00 19.40 0.00 5.22 4.33 19.81 6.24 0.00 0.00 35 ER12a ExonRegion 0 0.94 45.74 32.25 86.33 23.37 165.15 105.66 17.16 48.64 44.37 243.76 156.16 209.11 144.60 54.86 76.00 126.19 27.12 35.93 123.06 58.03 21.12 17.66 36 E12a_E13a KnownJunction 0 3.26 30.26 49.02 96.69 32.85 230.89 195.64 21.60 51.76 66.27 334.87 166.40 289.10 170.82 67.12 114.76 162.13 16.91 45.55 159.67 37.87 23.15 19.89 37 ER13a ExonRegion 0 8.86 49.23 42.91 90.22 29.77 174.48 134.66 16.74 64.35 54.43 298.75 173.95 270.36 166.88 77.28 89.97 168.55 31.41 41.04 134.31 63.93 20.79 26.15 38 E13a_E14a KnownJunction 0 16.97 96.10 57.74 111.74 32.26 266.83 178.68 14.95 82.23 67.53 237.64 138.95 275.79 162.93 113.73 77.76 135.30 28.89 46.87 145.99 45.04 27.98 29.28 39 ER14a ExonRegion 0 4.74 46.34 34.32 84.77 33.25 226.41 128.05 15.91 59.96 49.39 233.70 169.66 231.88 129.36 70.95 48.35 131.10 17.43 24.37 106.97 43.87 20.16 12.56 40 E14a_E15a KnownJunction 0 3.48 53.54 24.95 66.43 28.01 157.86 107.36 27.40 50.26 49.43 204.53 173.61 243.00 142.50 85.91 49.56 84.34 17.41 59.11 113.77 41.21 9.37 8.02 41 ER15a ExonRegion 0 1.65 35.44 37.63 94.76 15.31 150.63 101.06 26.32 61.38 61.20 310.48 172.56 243.66 143.72 89.13 66.42 123.13 25.88 32.03 129.08 36.47 28.81 23.19 42 E15a_E16a KnownJunction 0 3.78 44.14 54.29 101.52 19.27 154.57 117.47 24.89 73.73 62.40 334.66 157.25 120.45 151.69 56.00 43.41 146.33 22.68 35.30 92.30 36.26 33.07 24.07 43 ER16a ExonRegion 0 6.43 65.94 39.98 87.46 27.33 254.02 122.53 31.61 63.63 57.46 299.31 159.79 196.42 126.43 83.92 57.10 133.29 16.61 33.95 118.93 42.75 24.81 21.86 44 E16a_E17a KnownJunction 1 9.56 97.94 52.48 98.52 51.27 223.05 158.10 24.93 77.11 45.42 309.55 115.84 346.24 158.28 79.36 89.46 153.34 11.11 19.58 133.65 42.81 36.43 36.36 45 ER17a ExonRegion 0 7.21 62.52 37.08 97.72 33.60 215.90 143.88 20.74 52.60 46.33 265.95 139.77 222.70 122.81 90.35 78.12 118.61 16.21 18.45 118.28 47.09 24.08 19.82 46 E17a_E18a KnownJunction 0 7.04 43.28 58.22 132.58 40.66 290.29 154.53 33.89 74.02 50.69 271.54 110.74 155.51 154.10 152.05 90.57 102.48 21.68 4.24 114.48 30.52 35.21 30.90 47 E18_Aa NovelBoundary 0 0.00 12.50 14.52 6.83 7.30 6.42 15.06 6.33 4.95 5.80 5.32 25.21 20.62 4.94 10.75 0.00 4.02 3.77 3.86 2.88 0.00 0.00 0.00 48 ER18a ExonRegion 0 7.41 56.09 69.65 145.74 30.57 247.66 138.51 21.64 65.52 59.81 326.25 134.00 168.00 129.64 101.85 76.21 149.01 21.39 31.36 106.87 55.35 25.93 15.08 49 E18_Da NovelBoundary 0 3.63 17.56 18.95 5.33 0.00 0.00 22.79 0.00 1.16 6.15 2.68 6.75 6.66 2.47 6.30 4.19 0.00 2.11 0.00 6.52 3.09 0.00 0.00 50 E18a_E19a KnownJunction 0 10.82 137.41 94.50 204.44 38.88 351.90 188.75 27.52 78.15 87.06 475.70 194.76 267.19 160.22 76.64 121.16 226.55 18.74 46.21 162.29 82.23 46.17 30.90 51 E19_Aa NovelBoundary 0 3.41 21.25 19.81 24.41 0.00 8.69 17.14 2.55 9.95 6.10 10.11 15.00 0.00 7.06 10.01 12.82 8.79 1.74 8.56 9.78 0.00 0.00 0.00 52 ER19a ExonRegion 0 8.24 46.88 40.10 98.73 33.71 191.96 110.47 18.65 54.00 53.72 214.85 125.93 131.47 117.02 91.79 56.44 83.64 19.16 35.29 98.94 36.27 18.83 15.48 53 E19_Da KnownBoundary 0 6.15 67.03 36.99 89.97 28.10 181.20 112.35 15.90 66.35 57.59 103.24 108.04 82.79 86.17 58.84 19.65 57.88 8.50 12.33 72.10 17.17 23.15 16.30 54 ER19b ExonRegion 0 7.27 34.16 42.03 104.66 27.89 120.38 93.23 18.63 56.19 42.30 91.21 75.93 92.22 51.13 62.35 26.09 42.41 15.24 26.37 71.36 12.61 14.57 9.89 55 IG42 Intergenic 0 2.75 37.33 27.47 68.59 17.19 66.11 45.11 9.66 27.97 20.44 17.03 17.25 27.18 16.81 10.25 7.02 8.70 6.34 9.00 24.36 3.99 5.34 4.92 56 IG42_AR1 ActiveIntergenicRegion 0 1.73 27.65 19.50 60.05 11.05 47.73 40.08 7.33 23.88 19.31 19.73 24.46 34.80 16.73 9.19 7.64 8.87 4.66 9.31 27.27 4.21 4.71 4.46 57 IG42_SR1 SilentIntergenicRegion 0 3.33 27.67 21.69 49.70 10.35 42.98 33.27 6.75 18.17 14.93 8.65 8.90 8.51 9.72 5.23 5.64 8.08 4.00 8.07 19.11 3.19 5.56 4.10 58 IG42_AR2 ActiveIntergenicRegion 0 0.00 7.85 6.34 6.25 3.51 37.88 35.56 0.00 3.24 5.97 5.93 3.58 6.15 7.11 0.70 6.56 5.58 2.04 0.00 8.00 1.60 5.32 0.00 59 IG42_SR2 SilentIntergenicRegion 0 3.80 28.30 35.53 83.93 28.65 120.53 74.09 8.89 38.32 22.67 17.19 19.12 24.47 21.95 12.11 8.79 9.65 10.46 7.96 24.59 4.10 3.52 6.51 60 IG42_AR3 ActiveIntergenicRegion 0 4.42 11.33 30.38 64.44 13.53 73.59 40.84 9.74 32.40 13.22 14.53 6.85 21.44 16.56 22.19 15.32 13.89 20.12 22.05 13.51 2.64 7.83 1.52 61 IG42_SR3 SilentIntergenicRegion 0 0.00 10.54 4.20 5.90 5.35 84.95 57.58 0.00 2.70 6.09 10.49 0.00 19.05 9.21 3.08 2.12 5.32 3.66 12.94 11.59 7.56 1.83 1.98 62 IG42_AR4 ActiveIntergenicRegion 0 1.60 50.99 30.90 77.65 22.55 73.35 45.93 11.45 33.39 23.49 17.91 15.81 34.13 18.36 9.05 4.68 8.66 5.24 7.40 24.13 3.82 6.23 5.47 63 IG42_AR5 ActiveIntergenicRegion 0 7.25 73.25 38.34 80.65 23.92 74.92 42.74 20.88 25.89 22.11 21.93 11.85 18.80 20.72 20.46 10.50 7.93 11.04 12.43 24.44 5.10 6.22 7.00 64 IG42_AR6 ActiveIntergenicRegion 0 5.10 41.14 57.73 115.75 17.88 74.03 46.47 11.26 47.08 32.04 14.54 18.40 20.91 14.39 16.86 7.37 7.40 8.43 9.69 34.93 3.90 7.12 2.63