Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PLK4 Gene 0 35.12 93.38 43.24 43.07 65.30 55.47 116.03 50.46 18.19 80.33 201.55 186.16 92.52 166.39 81.59 124.32 148.09 70.59 27.60 93.52 2.98 20.01 6.99 2 270861 Transcript 0 40.67 113.84 41.94 43.52 66.33 60.19 125.20 45.38 15.87 76.52 203.19 181.53 80.69 158.52 90.86 124.60 142.39 70.18 26.05 89.29 2.65 19.71 7.70 3 IG43_AR2 ActiveIntergenicRegion 0 2.99 2.52 2.26 1.97 1.67 0.78 4.21 1.36 2.00 6.27 4.44 6.87 4.39 6.05 5.91 11.71 17.51 4.54 4.22 5.95 1.17 0.00 3.11 4 ER1a ExonRegion 1 7.09 23.94 8.12 4.14 8.31 22.33 31.40 10.06 8.18 28.92 105.87 12.37 3.83 134.06 23.87 151.19 115.33 136.25 26.80 67.06 5.10 5.88 7.76 5 E1_Da NovelBoundary 0 0.00 0.00 1.39 0.00 0.00 0.00 2.21 0.00 1.79 0.00 4.26 0.00 0.00 0.00 4.45 17.43 0.00 24.79 0.00 5.94 0.00 0.00 0.00 6 E1a_E2a KnownJunction 1 13.71 54.53 9.49 15.65 7.56 19.65 26.98 7.02 7.49 43.65 149.35 20.26 0.00 135.62 45.12 335.47 101.26 242.50 16.94 91.15 3.15 5.76 12.12 7 I1 Intron 0 0.97 2.80 1.12 1.71 0.20 0.28 4.87 1.38 0.14 1.96 9.92 0.27 3.25 4.35 1.73 5.92 11.88 14.63 2.20 4.56 0.51 0.96 0.45 8 I1_SR2 SilentIntronRegion 0 0.71 0.00 0.00 0.08 0.00 0.00 2.95 2.21 0.00 1.34 9.81 0.11 5.22 2.37 2.77 5.02 11.72 14.89 1.92 3.14 0.74 1.41 0.00 9 I1_AR2 ActiveIntronRegion 0 1.40 4.71 2.42 3.66 0.44 0.30 6.45 1.45 0.30 3.31 12.79 0.53 2.56 7.13 0.81 7.87 14.40 18.93 3.28 6.18 0.00 1.03 0.49 10 ER2a ExonRegion 1 6.61 49.27 26.08 14.13 24.08 59.41 65.40 14.84 12.40 40.64 185.26 51.32 23.50 90.65 25.63 136.01 110.65 117.18 7.93 85.64 3.33 8.94 4.40 11 E2a_E3a KnownJunction 1 0.00 45.85 20.14 7.59 25.72 141.34 147.19 16.35 13.66 43.30 194.21 55.22 33.28 69.10 13.72 48.11 79.94 39.09 12.42 68.07 3.03 13.72 0.00 12 ER3a ExonRegion 0 11.22 76.56 42.93 24.53 31.11 45.39 91.05 32.32 23.25 55.85 250.87 144.54 91.70 148.73 52.43 122.72 166.08 72.18 25.95 100.40 1.31 20.49 0.00 13 E3a_E4a KnownJunction 0 24.89 37.69 42.70 20.54 20.88 46.96 49.15 45.43 18.87 71.67 267.38 150.20 128.56 163.05 60.33 106.47 182.80 52.65 20.05 97.47 3.15 25.78 0.00 14 E4_Aa NovelBoundary 0 0.00 3.29 9.17 9.19 7.56 5.39 22.17 5.09 3.21 16.22 23.95 25.96 25.81 33.79 10.75 22.13 33.85 9.66 4.80 37.26 0.00 5.94 0.00 15 ER4a ExonRegion 0 24.33 61.38 40.28 25.23 48.63 65.11 79.61 42.19 18.52 66.78 254.05 255.10 134.87 168.95 42.36 126.04 192.11 59.47 23.54 104.74 3.28 26.61 3.19 16 E4a_E5a KnownJunction 1 30.15 123.79 55.76 38.92 49.41 66.72 120.74 38.45 27.72 66.64 285.70 313.45 147.07 253.11 51.05 164.91 238.80 69.60 18.26 111.41 8.09 16.96 4.35 17 E5_Aa NovelBoundary 0 3.78 5.72 15.05 8.96 3.82 0.00 23.23 1.73 3.27 9.00 7.21 0.00 6.82 0.00 8.90 12.39 4.11 2.57 13.65 5.75 0.00 0.00 0.00 18 ER5a ExonRegion 0 23.91 74.85 43.24 42.31 65.23 60.15 124.61 49.50 22.16 85.56 290.51 262.82 145.45 231.28 65.55 161.19 217.56 91.99 37.17 131.70 4.92 24.59 9.28 19 E5a_E6a KnownJunction 0 8.37 90.77 53.64 40.42 37.44 31.23 111.33 31.91 13.69 60.65 233.48 234.53 102.75 206.02 81.59 118.43 137.63 56.79 12.71 89.80 3.15 14.45 3.67 20 I5 Intron 0 3.16 20.70 7.69 2.86 6.58 2.90 17.20 4.52 3.72 9.15 14.08 33.18 11.44 13.04 4.73 10.96 9.85 8.00 1.96 9.53 0.00 0.73 0.00 21 I5_SR1 SilentIntronRegion 0 3.27 21.22 7.81 2.92 6.59 3.00 17.68 4.63 3.78 9.43 14.49 33.67 11.76 13.45 4.89 11.24 9.88 8.25 1.96 9.74 0.00 0.75 0.00 22 E6_Aa NovelBoundary 0 3.63 12.63 19.90 7.96 18.59 8.69 23.85 9.00 1.39 13.70 16.53 12.60 12.82 30.90 0.00 26.92 26.27 7.42 4.52 8.25 0.00 2.33 0.00 23 ER6a ExonRegion 0 24.71 122.56 38.22 34.02 58.63 53.87 108.49 34.84 11.37 65.83 225.79 267.27 96.08 222.39 57.02 176.39 179.92 79.53 24.85 103.98 4.36 16.26 12.15 24 E6_Da NovelBoundary 0 3.78 12.17 16.08 5.53 0.00 8.69 9.63 8.13 2.84 10.07 9.53 12.60 0.00 2.35 10.26 0.00 17.20 6.92 0.00 11.70 0.00 0.00 0.00 25 E6a_E7a KnownJunction 1 46.08 188.32 41.28 36.16 69.61 52.58 166.05 35.20 19.76 79.86 268.75 294.25 148.85 274.30 34.37 131.59 170.83 58.86 34.17 109.30 5.62 18.92 9.73 26 ER7a ExonRegion 0 30.97 146.80 30.36 42.54 62.05 57.73 136.82 41.48 12.56 72.43 204.68 230.70 108.93 215.22 67.20 143.95 181.40 76.77 26.09 96.05 5.05 19.13 7.88 27 E7a_E8a KnownJunction 0 38.53 125.44 27.53 30.33 85.31 68.82 79.32 36.02 11.95 50.85 160.88 173.46 100.48 135.50 70.59 101.00 135.58 43.90 39.53 66.03 0.00 21.92 7.51 28 I7 Intron 0 3.69 9.88 3.52 4.30 14.16 6.51 19.95 6.74 2.64 11.07 17.81 44.83 13.70 18.67 3.90 12.22 12.54 7.11 0.99 14.31 0.00 2.98 1.10 29 I7_SR1 SilentIntronRegion 0 3.83 10.01 3.79 4.25 14.74 6.86 20.70 6.96 2.57 11.63 17.26 44.90 14.01 19.14 4.27 12.55 13.19 7.41 1.10 14.27 0.00 3.30 1.01 30 I7_AR1 ActiveIntronRegion 1 7.56 18.88 2.45 8.57 11.85 2.88 17.59 11.11 6.18 10.98 21.26 62.47 14.07 14.85 2.90 15.71 22.16 10.82 0.00 20.97 0.00 0.00 1.68 31 I7_AR2 ActiveIntronRegion 0 1.87 7.72 0.86 4.51 8.54 3.32 12.64 3.99 3.05 5.26 23.96 43.36 10.76 14.47 0.09 8.44 4.66 3.70 0.00 14.33 0.00 0.00 1.99 32 ER8a ExonRegion 0 36.26 153.12 24.41 36.63 57.67 55.99 122.03 33.10 18.14 60.48 217.57 189.92 53.02 173.21 82.81 96.07 167.31 46.39 26.54 90.39 4.22 19.72 10.32 33 E8a_E9a KnownJunction 1 44.38 197.20 26.55 38.09 48.81 19.02 137.74 26.70 19.10 74.11 234.32 183.36 78.89 125.85 101.74 63.40 158.58 42.57 18.07 70.95 0.00 36.01 19.04 34 E8a_E10a NovelJunction 0 0.00 10.92 3.67 7.29 35.74 19.19 10.82 4.19 1.07 4.65 0.00 0.00 0.00 9.77 4.45 0.00 4.11 9.24 0.00 0.00 0.00 0.00 0.00 35 ER9a ExonRegion 0 30.04 145.67 28.23 32.72 63.80 37.46 125.35 39.60 14.32 60.20 171.41 213.15 67.30 135.92 75.35 99.15 120.50 49.44 28.76 82.07 0.00 23.02 10.86 36 E9a_E10a KnownJunction 0 38.60 94.19 39.24 50.08 65.28 42.70 111.03 43.09 9.52 63.23 113.13 183.36 57.95 144.92 78.25 82.46 98.27 50.74 21.46 92.68 0.00 22.90 12.12 37 E10_Aa NovelBoundary 0 7.11 24.47 3.40 3.90 30.48 2.84 55.25 4.19 5.64 17.97 16.32 17.71 6.17 12.95 14.96 0.00 8.32 6.26 4.80 12.34 0.00 6.25 0.00 38 ER10a ExonRegion 0 45.00 164.18 38.53 46.79 87.14 64.84 137.56 53.69 16.16 80.82 142.52 204.67 78.67 139.15 87.41 78.44 107.65 38.65 25.31 80.41 0.00 19.39 8.24 39 E10_Da NovelBoundary 0 3.48 55.19 10.61 9.62 24.19 7.78 71.32 10.15 10.13 22.91 22.16 63.62 25.65 20.07 44.26 8.46 18.14 0.00 0.00 33.05 0.00 0.00 0.00 40 E10a_E11a KnownJunction 0 55.42 178.06 29.57 56.54 53.90 52.47 140.00 38.86 9.52 75.00 80.02 108.34 55.35 40.14 62.80 37.00 53.20 19.61 4.61 54.01 0.00 8.45 4.35 41 I10 Intron 0 7.77 17.21 4.10 6.54 19.43 12.36 30.64 13.89 5.93 18.94 15.05 48.94 20.47 23.16 16.26 12.26 7.66 4.49 3.82 15.14 0.17 4.53 1.54 42 I10_AR1 ActiveIntronRegion 0 6.90 21.78 4.09 4.45 23.50 10.46 32.68 17.26 5.77 17.46 16.63 32.40 10.09 21.65 16.72 14.19 11.91 5.75 6.01 22.20 0.00 3.61 2.52 43 I10_SR1 SilentIntronRegion 0 6.39 14.96 3.95 7.98 19.17 13.81 29.91 14.14 6.40 20.95 16.48 54.56 26.56 24.38 16.83 11.67 7.26 4.73 3.45 13.68 0.04 4.87 1.35 44 I10_AR2 ActiveIntronRegion 1 18.02 19.68 5.13 3.43 11.72 8.87 30.74 4.76 3.77 11.47 3.45 57.63 10.90 20.32 12.27 11.37 0.00 0.17 0.77 6.99 1.31 4.90 0.28 45 E11_Aa NovelBoundary 1 10.52 19.60 4.97 6.03 28.52 19.31 56.70 8.91 3.24 25.95 9.37 55.97 59.41 20.48 9.64 4.10 0.00 0.00 4.71 2.62 0.00 14.08 0.00 46 ER11a ExonRegion 0 60.00 157.86 37.64 52.41 98.24 65.58 141.57 52.28 14.26 83.83 161.22 186.52 73.26 97.16 95.44 62.55 80.72 42.61 17.42 77.25 0.84 24.07 5.65 47 E11a_E12a KnownJunction 1 73.05 149.91 29.69 73.78 74.19 22.54 136.37 59.43 14.99 109.73 176.31 327.86 73.05 98.89 138.33 153.63 100.14 49.50 30.02 108.72 0.00 17.39 7.34 48 E12_Aa NovelBoundary 0 21.11 25.26 15.43 5.93 16.55 20.27 13.78 19.67 2.84 5.69 9.32 0.00 13.64 19.95 24.60 23.75 9.54 8.08 0.00 11.44 0.00 0.00 0.00 49 ER12a ExonRegion 0 48.31 117.59 47.55 59.37 97.52 58.78 148.05 50.73 22.12 93.92 216.78 218.36 80.44 134.84 145.28 117.24 143.52 60.59 23.58 97.48 1.22 23.21 8.71 50 E12a_E13a KnownJunction 1 60.16 143.72 69.63 73.38 91.60 89.10 158.06 67.61 12.44 96.49 249.54 177.36 88.47 154.87 121.52 70.32 182.98 66.49 49.22 81.94 0.00 33.86 8.11 51 ER13a ExonRegion 0 77.95 140.06 62.21 57.98 88.59 92.63 149.46 61.76 15.98 100.89 262.26 226.92 86.89 165.68 165.18 136.68 186.34 90.18 44.10 99.77 2.70 22.59 9.39 52 E13a_E14a KnownJunction 0 53.34 101.30 64.07 52.11 141.17 92.84 182.26 58.24 14.55 97.54 217.00 150.05 92.04 209.02 229.56 145.43 144.09 103.05 23.81 83.28 8.34 13.84 22.96 53 ER14a ExonRegion 0 82.90 98.10 61.98 67.63 110.96 70.69 212.97 73.54 18.55 103.57 272.88 185.34 78.63 214.07 166.94 178.48 170.92 89.60 40.37 97.66 3.20 18.29 8.93 54 E14a_E15a KnownJunction 0 79.64 155.24 79.48 89.57 85.57 47.93 184.78 95.00 19.50 115.83 233.80 211.27 71.10 210.78 211.39 231.82 152.69 104.75 60.99 102.52 5.62 32.76 7.51 55 ER15a ExonRegion 0 83.51 131.63 60.40 58.25 86.12 79.76 140.06 74.99 23.16 113.66 234.17 148.90 63.42 175.80 131.70 141.11 165.35 79.02 29.32 82.92 2.55 17.31 7.38 56 E15a_E16a KnownJunction 0 60.97 112.61 59.28 70.62 139.90 137.82 217.55 68.76 7.00 112.31 150.20 135.79 65.90 160.46 131.16 85.02 122.77 26.07 21.08 89.23 0.00 19.72 3.59 57 ER16a ExonRegion 0 40.54 66.94 61.97 56.64 71.75 44.39 98.34 73.75 20.97 97.90 88.83 110.83 71.55 85.55 101.15 60.34 49.25 19.67 16.34 54.02 0.00 19.04 2.21