Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BBS7 Gene 0 24.81 74.41 36.09 43.17 50.45 100.24 44.43 32.88 62.90 40.23 42.06 59.14 32.62 33.57 18.71 32.72 26.92 24.17 28.79 44.68 34.56 71.37 41.88 2 264499 Transcript 0 22.29 84.42 36.67 45.99 50.53 123.72 49.13 34.05 73.90 45.21 61.73 69.52 33.57 46.15 24.87 48.71 42.84 37.27 35.86 64.56 51.79 87.20 57.38 3 ER1a ExonRegion 0 10.30 16.82 6.72 8.70 19.80 104.53 22.84 13.43 16.89 18.33 27.46 6.34 4.95 13.25 12.07 23.49 22.64 18.66 15.54 26.06 28.36 19.05 24.19 4 E1a_E2a KnownJunction 1 0.00 8.81 30.96 8.69 7.47 14.14 8.08 39.51 49.42 48.16 112.66 74.57 14.77 36.38 20.40 54.77 84.06 26.45 41.22 43.08 53.93 50.95 51.22 5 ER2a ExonRegion 1 0.00 20.09 17.79 15.65 7.46 37.37 15.41 31.03 60.39 40.59 106.54 48.21 16.34 66.22 39.47 79.26 54.56 39.45 66.80 53.96 71.59 83.69 83.47 6 E2a_E3a KnownJunction 1 0.00 18.02 12.51 22.08 7.30 26.63 19.43 30.60 73.78 29.92 94.81 16.81 12.82 65.57 49.20 96.38 48.99 46.26 53.84 61.81 78.40 88.36 110.12 7 ER3a ExonRegion 0 7.22 26.69 19.74 21.74 43.36 141.84 25.16 23.87 71.62 42.47 93.24 28.31 22.41 46.48 31.32 64.40 56.48 72.68 53.09 64.30 72.58 69.12 86.47 8 E3a_E4a KnownJunction 0 7.56 37.56 26.08 25.80 120.12 483.87 62.49 23.95 68.20 56.25 134.67 52.22 35.55 29.96 34.61 60.75 84.90 81.54 21.55 72.99 98.23 97.97 79.56 9 ER4a ExonRegion 0 15.00 108.10 28.46 25.65 48.07 172.63 47.10 31.28 76.24 42.42 101.17 81.13 32.24 51.14 24.55 42.93 63.32 43.74 28.02 51.79 78.12 92.14 64.22 10 E4_Da NovelBoundary 0 21.04 15.19 0.00 7.82 0.00 14.14 10.73 6.53 5.53 8.52 20.69 0.00 6.82 11.60 13.35 3.50 3.83 8.25 13.37 3.26 2.35 12.43 11.18 11 E4a_E5a KnownJunction 0 17.48 99.65 30.48 38.89 72.41 75.30 48.14 34.21 82.00 32.93 65.49 70.52 32.79 31.14 38.20 49.05 40.21 35.65 21.65 60.85 55.29 89.95 81.35 12 I4 Intron 0 2.27 12.40 6.67 4.35 4.34 9.88 6.08 4.81 3.95 5.64 4.51 14.68 4.56 3.79 2.39 2.61 1.72 1.29 1.93 4.33 0.48 7.10 2.34 13 I4_AR1 ActiveIntronRegion 0 2.05 14.41 4.71 3.93 4.31 9.65 7.25 3.32 2.57 5.32 5.19 17.94 2.07 6.92 2.77 2.87 1.42 2.17 2.05 4.34 0.47 7.61 3.15 14 I4_SR1 SilentIntronRegion 0 3.32 13.72 9.84 5.54 5.77 14.35 8.36 7.72 5.66 6.92 8.23 16.37 10.36 4.70 3.43 5.16 3.22 1.50 2.21 5.35 0.76 9.67 2.80 15 ER5a ExonRegion 0 17.91 73.38 38.46 38.95 50.15 71.35 43.85 39.89 83.47 48.64 66.98 96.68 39.45 48.71 23.77 56.18 45.84 52.76 44.60 59.31 59.79 107.02 70.64 16 E5_Da NovelBoundary 0 3.78 12.04 13.01 10.79 28.86 4.94 10.42 14.95 20.43 15.12 2.68 24.31 13.15 0.00 9.64 0.00 0.00 1.70 9.60 12.14 3.15 7.53 0.00 17 E5a_E6a KnownJunction 0 10.89 166.62 20.25 24.84 58.06 83.76 26.10 32.33 77.40 38.60 50.64 93.93 38.47 49.21 22.99 64.00 36.56 44.98 45.55 61.23 34.60 132.88 53.69 18 I5_AR1 ActiveIntronRegion 0 5.89 8.55 5.98 4.74 6.60 12.03 2.59 1.70 5.63 4.38 1.35 15.89 2.57 1.36 0.00 5.46 0.00 1.92 2.92 9.50 0.15 4.42 0.00 19 I5_AR2 ActiveIntronRegion 0 5.65 15.23 21.98 16.34 13.87 9.46 4.94 13.87 18.23 5.37 0.00 7.87 12.01 3.17 7.78 5.73 0.00 3.06 5.94 9.21 2.58 9.07 1.50 20 I5_AR3 ActiveIntronRegion 0 13.49 22.79 21.52 16.09 8.27 6.73 6.91 11.94 20.98 12.22 1.87 11.61 10.61 3.77 3.96 5.17 3.83 5.50 6.77 9.86 4.67 4.02 1.70 21 E6_Aa NovelBoundary 0 2.82 3.35 13.78 19.54 4.24 7.04 9.32 11.99 9.00 7.63 2.68 11.85 6.82 2.47 0.00 10.68 0.00 1.70 3.95 17.90 2.47 2.88 0.00 22 ER6a ExonRegion 0 6.78 123.05 25.03 26.10 36.51 75.76 28.35 19.27 53.52 35.84 40.62 64.35 37.52 58.29 17.84 45.19 29.57 33.66 51.53 52.05 49.12 89.71 49.24 23 E6_Da NovelBoundary 0 0.00 3.35 0.00 7.23 0.00 2.27 8.04 4.85 12.90 3.33 5.21 19.66 0.00 6.83 5.19 12.82 8.23 0.00 0.00 0.00 5.62 17.39 15.02 24 E6a_E7a KnownJunction 0 9.85 90.31 29.89 27.10 3.99 22.15 32.19 16.72 44.36 39.16 21.85 63.32 26.78 33.85 13.85 7.78 3.65 21.02 4.05 36.75 44.11 48.25 20.57 25 ER7a ExonRegion 0 12.34 51.53 19.93 32.90 23.74 70.09 42.60 19.84 56.52 32.10 33.60 62.83 30.55 52.86 15.87 26.11 25.87 32.12 26.74 49.52 39.03 55.28 44.53 26 E7a_E8a KnownJunction 1 9.48 24.40 13.54 27.07 14.86 60.82 36.30 16.68 50.03 28.07 39.80 78.93 13.31 38.79 42.77 15.55 25.43 9.16 9.32 51.65 23.60 81.93 26.21 27 E8_Aa NovelBoundary 0 20.60 6.45 1.09 11.19 3.82 10.45 10.73 7.64 17.94 4.54 2.00 6.75 21.26 4.36 0.00 0.00 0.00 1.99 18.26 14.76 6.30 5.57 0.00 28 ER8a ExonRegion 0 21.67 40.41 24.17 45.71 32.62 95.81 51.29 31.44 67.09 35.70 56.08 67.92 31.83 50.00 17.81 51.18 43.82 23.78 30.22 75.28 41.53 60.68 53.44 29 E8a_E9a KnownJunction 0 14.74 48.94 16.53 57.80 24.53 58.94 58.47 31.79 71.93 44.27 63.49 50.27 20.29 46.44 11.50 52.21 27.12 15.09 38.40 98.18 65.61 79.97 44.99 30 ER9a ExonRegion 0 12.67 32.27 20.33 46.19 26.38 63.73 41.15 26.09 67.68 32.98 65.74 69.17 27.70 44.92 21.13 32.52 37.44 29.52 34.81 78.05 53.33 67.78 50.99 31 E9a_E10a KnownJunction 0 5.70 44.47 35.04 40.72 48.64 113.46 47.25 26.57 79.69 39.81 47.85 66.77 29.06 53.45 20.52 35.38 81.07 40.17 41.22 72.80 52.02 73.60 69.40 32 ER10a ExonRegion 0 18.39 63.12 21.47 46.91 42.27 104.99 45.80 33.96 65.59 46.80 63.05 74.11 33.65 58.04 24.17 60.54 40.83 22.68 49.20 68.66 50.41 90.12 63.98 33 E10a_E11a KnownJunction 1 31.34 67.03 12.33 54.54 31.92 132.71 51.10 27.60 70.77 49.56 61.91 65.57 0.00 48.91 26.70 46.48 24.31 19.36 17.88 44.61 41.08 72.26 47.80 34 ER11a ExonRegion 0 26.40 109.21 23.51 50.49 40.68 105.39 51.14 33.49 68.58 46.40 50.43 62.47 45.13 43.16 29.54 46.91 33.20 32.78 40.72 69.82 20.61 91.26 52.84 35 E11a_E12a KnownJunction 1 20.45 132.15 27.26 52.11 28.01 130.21 28.26 39.18 83.04 40.62 33.90 107.74 52.76 51.50 58.84 57.76 30.01 49.74 46.40 60.40 37.07 95.10 46.86 36 E11a_E13a NovelJunction 0 0.00 0.00 0.00 0.00 4.33 16.64 6.76 0.00 3.41 0.00 0.00 0.00 0.00 2.35 0.00 0.00 0.00 3.81 0.00 0.00 0.00 0.00 0.00 37 E12_Aa NovelBoundary 0 0.00 15.33 3.43 7.23 16.72 23.68 22.26 6.12 7.47 10.31 4.53 0.00 0.00 0.00 0.00 3.59 0.00 8.29 9.04 8.88 0.00 5.63 8.62 38 ER12a ExonRegion 0 21.14 103.52 36.01 74.07 50.41 148.49 46.46 44.02 85.04 45.11 56.31 85.61 47.53 52.19 36.17 66.30 42.16 50.18 54.92 90.04 43.02 115.73 61.24 39 E12a_E13a KnownJunction 0 44.97 120.24 59.05 100.22 49.41 137.59 55.25 62.06 104.37 60.20 81.60 92.73 60.87 68.10 13.35 90.83 63.11 70.84 52.61 101.95 56.59 141.57 60.10 40 ER13a ExonRegion 0 22.90 106.39 50.95 77.15 50.43 132.39 52.22 44.02 86.40 50.74 74.53 89.28 61.61 58.07 30.42 79.57 54.91 80.80 32.14 93.55 95.79 96.76 72.44 41 E13a_E14a KnownJunction 0 29.63 155.70 44.50 69.49 46.52 143.55 84.39 35.65 80.41 47.12 72.76 87.93 32.30 44.62 28.56 71.18 65.64 81.95 24.85 78.17 92.11 77.09 102.35 42 ER14a ExonRegion 0 53.99 175.29 46.27 76.12 58.81 150.48 68.12 45.64 83.70 51.09 65.12 87.64 50.42 69.05 35.93 84.01 53.40 76.84 59.84 86.76 96.85 101.23 78.01 43 E14a_E15a KnownJunction 0 35.04 188.65 66.32 49.64 43.29 217.26 62.89 25.22 68.26 46.50 45.22 69.32 19.32 63.51 22.25 62.38 51.61 43.48 31.81 79.70 94.89 57.99 62.23 44 ER15a ExonRegion 0 27.05 108.47 55.82 48.67 55.28 124.54 49.49 34.51 68.73 50.96 52.19 69.19 35.53 55.51 22.86 46.91 41.61 36.05 43.63 64.69 64.13 76.77 62.58 45 E15_Da NovelBoundary 0 0.00 10.00 4.08 8.26 0.00 8.69 1.90 0.00 8.83 5.00 4.63 11.70 0.00 2.24 0.00 13.93 8.88 0.00 0.00 2.81 0.00 0.00 0.00 46 E15a_E16a KnownJunction 0 41.04 106.63 89.09 38.32 75.89 176.77 54.32 36.15 72.40 54.72 53.07 37.36 32.47 50.68 15.20 28.20 46.84 27.73 32.57 69.03 54.49 88.73 43.62 47 E16_Aa NovelBoundary 0 0.00 5.79 10.47 13.32 7.89 38.50 14.97 13.51 8.77 18.56 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 3.26 0.00 5.45 0.00 48 ER16a ExonRegion 0 30.29 104.10 58.21 46.97 106.45 205.17 75.49 44.91 94.76 62.46 58.69 55.02 41.02 33.99 29.94 38.50 38.50 27.30 19.00 66.71 27.51 95.54 50.16 49 E16a_E17a KnownJunction 0 53.57 160.96 89.53 83.24 178.86 291.71 118.36 51.55 128.12 90.09 56.91 91.68 61.03 36.49 18.42 47.08 33.85 22.63 33.22 90.70 23.29 108.14 66.50 50 ER17a ExonRegion 0 50.25 103.32 59.11 70.87 88.35 168.36 74.94 48.53 112.16 68.89 64.18 94.25 61.69 40.01 22.93 46.58 44.59 21.75 52.93 68.33 40.39 146.05 54.95 51 E17a_E18a KnownJunction 0 66.60 107.02 69.28 83.21 77.93 114.08 74.28 71.02 110.07 65.25 68.33 118.54 38.31 34.08 13.35 20.42 58.25 20.98 39.62 82.96 29.90 138.14 31.50 52 ER18a ExonRegion 0 30.66 61.97 48.85 59.84 70.71 134.24 53.37 48.01 96.11 49.49 58.35 81.14 46.22 35.53 23.14 28.76 35.30 15.21 17.06 73.06 27.53 94.68 39.10 53 E18_Da NovelBoundary 0 17.34 65.58 43.94 26.84 41.17 59.91 42.35 35.45 65.10 39.70 24.37 31.06 42.85 17.19 42.15 24.78 24.87 1.66 18.07 71.78 2.90 54.50 18.78 54 E18a_E19a KnownJunction 0 13.19 53.15 42.67 42.39 73.68 112.15 74.81 13.97 53.65 25.12 28.69 62.12 27.27 32.37 0.00 11.96 9.07 6.80 33.88 11.89 10.19 96.44 41.32 55 I18 Intron 0 4.84 18.67 12.74 12.01 12.34 22.07 10.80 11.35 25.76 14.92 4.89 10.21 9.51 4.32 5.64 3.40 3.91 4.85 2.47 19.27 0.81 13.60 2.64 56 I18_AR1 ActiveIntronRegion 0 10.16 30.32 24.73 18.13 20.89 37.11 15.92 17.72 39.50 24.11 10.47 20.40 21.27 7.47 14.68 6.16 8.44 3.95 4.15 31.47 1.08 24.91 3.99 57 I18_SR1 SilentIntronRegion 0 2.17 12.84 6.73 8.96 8.06 14.55 8.25 8.17 18.89 10.33 2.09 5.11 3.61 2.75 1.10 2.01 1.63 5.31 1.63 13.17 0.68 7.94 1.96 58 E19_Aa NovelBoundary 0 0.00 16.77 22.18 16.58 4.33 28.96 1.72 15.90 25.17 17.43 5.37 6.30 6.82 0.00 0.00 4.27 0.00 1.74 4.80 14.13 0.00 2.45 3.24 59 ER19a ExonRegion 0 28.35 65.63 40.63 42.69 55.07 75.23 40.79 31.95 51.85 35.34 16.25 48.09 28.01 15.21 10.72 10.80 6.48 5.38 16.30 18.16 11.30 54.38 21.05 60 IG18_AR1 ActiveIntergenicRegion 0 3.21 6.21 1.23 4.28 4.37 17.29 3.46 3.29 9.91 6.37 4.08 2.43 0.65 2.56 0.00 2.94 1.67 0.74 2.16 4.08 8.53 3.36 7.40