Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 EXOSC9 Gene 0 177.80 246.73 167.16 154.55 173.16 135.40 169.83 95.89 72.52 111.50 335.26 352.82 186.85 257.22 215.36 230.33 269.72 110.73 102.08 157.56 48.33 85.26 51.29 2 379663 Transcript 0 11.14 6.52 2.49 7.06 10.08 5.92 15.34 4.03 3.08 10.56 78.82 79.14 51.49 48.90 50.92 46.33 62.42 8.62 3.67 13.03 4.06 9.97 6.54 3 243498 Transcript 1 60.97 197.14 183.35 129.95 126.06 72.97 96.14 97.02 75.46 92.16 146.88 180.66 41.07 111.96 170.47 64.34 180.83 54.51 50.17 113.52 19.83 52.91 27.49 4 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1b ExonRegion 1 135.26 249.07 53.27 38.06 112.76 112.33 110.02 33.90 29.80 44.97 158.51 24.93 12.14 112.38 88.27 170.93 145.63 95.80 61.78 79.72 41.12 42.43 50.51 6 E1a_E2a KnownJunction 1 36.01 83.54 65.58 42.88 22.58 7.84 31.66 34.63 33.85 68.61 216.00 35.11 13.64 69.10 56.99 58.10 197.01 42.61 8.47 74.14 85.62 25.53 4.35 7 ER2a ExonRegion 1 55.05 84.08 103.96 99.22 61.09 25.71 37.02 82.15 58.21 100.84 368.29 149.62 68.13 229.86 150.53 240.18 314.66 136.31 92.34 161.81 67.55 73.32 52.58 8 E2a_E3a KnownJunction 0 94.46 151.42 136.04 168.94 190.66 56.96 42.57 147.17 82.18 108.84 295.60 228.37 115.09 270.88 206.69 440.31 238.24 271.19 149.65 177.31 66.78 102.99 114.47 9 ER3a ExonRegion 0 46.92 187.72 129.17 124.00 247.19 233.93 214.19 101.96 69.38 104.06 364.75 299.74 141.72 290.09 204.68 305.56 300.46 153.39 126.03 172.07 81.46 85.74 78.43 10 E3a_E4a KnownJunction 0 159.73 448.41 152.27 179.73 122.24 134.81 109.88 112.58 61.66 109.81 343.82 295.75 178.40 281.07 180.36 226.35 384.85 118.06 57.23 148.42 76.11 38.94 44.39 11 ER4a ExonRegion 0 186.48 371.83 134.87 146.40 86.84 82.95 117.81 110.15 78.04 112.61 444.55 416.68 232.54 338.56 203.79 275.17 328.42 137.52 106.26 170.21 75.53 91.90 58.96 12 E4a_E5a KnownJunction 1 310.28 350.07 161.97 143.77 123.68 97.95 150.42 122.65 103.50 131.97 689.70 393.28 166.87 425.57 271.71 350.16 450.12 125.81 150.78 257.59 110.58 106.61 89.12 13 ER5a ExonRegion 0 270.76 321.63 185.26 175.14 150.31 127.57 150.25 107.80 98.50 130.47 571.86 446.59 233.04 434.19 263.36 341.30 425.22 183.30 148.47 227.60 72.32 105.05 75.10 14 E5a_E6a KnownJunction 0 360.43 395.46 236.66 191.35 236.93 269.33 212.33 113.65 117.39 158.78 582.83 429.14 334.72 451.41 323.38 349.91 380.74 213.24 180.33 296.51 64.25 147.63 88.09 15 ER6a ExonRegion 0 187.04 310.65 224.51 218.83 221.73 224.94 240.43 108.62 90.12 137.67 565.69 534.25 332.48 446.53 308.13 377.28 418.94 180.86 119.32 267.75 74.69 104.55 78.83 16 E6a_E7a KnownJunction 0 156.92 298.96 251.97 233.17 287.27 276.77 359.04 99.73 72.16 128.32 422.48 468.90 253.88 451.59 355.52 406.90 357.08 149.15 161.51 260.02 50.72 91.54 68.29 17 I6_AR2 ActiveIntronRegion 0 13.33 10.17 11.03 13.22 47.63 7.70 20.92 15.73 6.18 6.08 11.40 59.31 4.69 5.03 2.90 13.08 14.85 5.54 6.37 12.34 0.44 2.08 0.00 18 ER7a ExonRegion 0 152.93 290.57 219.69 202.05 220.01 180.44 231.77 103.92 75.30 123.03 413.44 553.26 323.75 361.40 303.85 299.36 320.93 162.74 143.68 230.30 51.23 113.25 55.84 19 E7a_E8a KnownJunction 0 201.44 388.68 304.13 291.47 220.54 187.68 198.07 158.67 109.23 156.74 432.21 505.66 325.95 426.04 411.03 299.49 313.70 100.77 226.92 260.85 43.80 181.86 67.52 20 ER8a ExonRegion 0 275.86 392.64 287.18 252.81 233.99 187.77 214.87 157.41 114.66 156.11 523.23 606.47 281.98 314.48 267.24 308.57 415.25 130.55 145.17 210.64 41.38 118.99 43.22 21 E8a_E9a KnownJunction 1 596.11 434.53 281.33 267.83 343.89 157.35 267.94 123.35 103.93 153.17 319.24 854.38 264.59 311.03 259.72 441.59 252.83 143.76 150.12 202.75 25.14 130.00 48.14 22 ER9a ExonRegion 0 404.59 457.00 332.86 291.82 374.79 252.78 353.07 170.35 130.95 185.70 451.26 690.00 323.84 327.92 320.91 328.19 367.99 138.63 167.78 231.09 59.80 139.71 69.84 23 E9a_E10a KnownJunction 0 272.05 299.09 381.89 283.85 271.48 165.19 265.59 175.10 136.72 181.00 391.57 626.90 314.75 271.94 233.39 395.28 335.76 169.63 141.46 233.75 72.96 144.69 91.68 24 I9 Intron 0 11.28 10.61 22.95 17.67 30.84 10.97 35.70 21.85 10.81 27.69 24.38 61.51 28.17 20.70 16.55 13.57 11.13 0.90 3.81 12.26 0.24 7.02 1.60 25 I9_AR1 ActiveIntronRegion 0 11.33 10.66 23.05 17.74 30.96 11.01 35.85 21.94 10.86 27.81 24.47 61.76 28.29 20.79 16.62 13.63 11.17 0.91 3.83 12.31 0.24 7.05 1.60 26 E10_Aa NovelBoundary 0 32.30 2.76 55.41 23.57 40.66 19.82 79.58 47.07 17.10 47.60 36.22 67.37 40.91 30.73 44.01 31.87 33.47 11.73 22.02 56.37 6.18 7.72 7.94 27 ER10a ExonRegion 0 164.79 280.80 249.23 227.24 219.22 150.17 222.17 155.09 107.21 179.18 359.87 503.12 266.46 315.10 304.07 235.99 292.93 105.89 118.73 186.24 57.11 94.59 62.49 28 E10_Da NovelBoundary 0 45.79 55.52 39.56 49.84 74.79 60.93 134.52 67.11 42.53 79.57 83.65 108.19 71.91 92.00 20.15 53.66 13.37 11.90 23.62 58.23 19.95 47.21 21.26 29 E10a_E11a KnownJunction 0 20.97 6.05 3.34 10.32 6.45 2.90 4.11 6.65 6.25 15.69 102.39 96.63 66.39 35.67 47.59 81.26 69.10 15.30 4.24 13.61 6.12 22.53 15.37 30 E10a_E12a KnownJunction 1 60.97 197.14 183.35 129.95 126.06 72.97 96.14 97.02 75.46 92.16 146.88 180.66 41.07 111.96 170.47 64.34 180.83 54.51 50.17 113.52 19.83 52.91 27.49 31 I10 Intron 0 41.58 42.51 33.50 47.47 81.11 48.52 80.56 46.92 25.46 44.24 65.59 147.42 71.03 58.75 48.02 40.47 32.21 12.50 18.23 44.56 4.39 25.57 13.88 32 I10_AR1 ActiveIntronRegion 0 15.00 23.91 10.73 21.42 46.26 36.46 56.54 22.26 10.82 24.82 35.09 115.02 55.71 38.04 26.76 10.28 17.69 6.85 12.12 25.01 0.76 16.93 6.60 33 I10_AR2 ActiveIntronRegion 0 23.39 31.84 31.33 47.46 77.62 44.12 83.07 53.96 31.36 52.73 73.21 161.71 68.12 60.73 41.28 42.43 35.72 10.50 13.94 46.78 5.07 23.03 16.23 34 I10_SR2 SilentIntronRegion 0 25.70 32.30 22.29 21.09 33.89 19.60 19.73 14.07 10.23 29.16 34.10 58.45 51.03 36.81 31.50 18.12 19.81 0.00 4.70 39.51 2.31 26.54 1.96 35 I10_AR3 ActiveIntronRegion 0 83.63 69.56 54.22 69.87 116.28 65.65 102.35 61.03 31.46 50.95 83.34 165.42 88.04 74.48 73.33 63.31 40.52 20.32 29.11 57.33 6.58 34.84 17.99 36 E11_Aa NovelBoundary 0 143.14 74.99 61.56 78.68 115.53 109.99 177.40 101.33 44.30 91.14 96.18 129.19 115.58 146.27 95.93 95.79 104.91 125.94 42.73 68.20 11.74 19.66 20.06 37 ER11a ExonRegion 0 20.50 14.71 2.52 8.58 18.00 18.45 34.14 3.22 4.29 13.49 124.69 149.41 79.82 111.01 89.60 63.81 97.47 12.43 6.68 23.03 10.11 11.40 4.32 38 E11_Da NovelBoundary 1 93.94 36.64 69.54 91.16 111.21 118.17 90.58 79.36 28.73 67.42 98.08 122.14 34.58 124.67 126.83 154.06 50.12 70.89 64.85 45.06 18.97 45.50 30.73 39 E11a_E12a KnownJunction 0 3.11 5.33 4.08 9.36 15.87 2.33 23.10 4.52 1.79 13.05 88.18 70.52 59.74 48.09 66.51 40.25 83.12 6.76 3.76 15.47 0.00 5.94 6.49 40 I11 Intron 0 29.68 20.74 3.54 7.77 35.82 50.27 55.71 6.57 5.87 8.69 27.11 25.49 17.76 61.66 31.33 20.84 18.94 1.76 18.28 17.63 4.21 10.63 3.74 41 I11_AR1 ActiveIntronRegion 0 30.06 21.01 3.58 7.87 36.27 50.91 56.41 6.65 5.94 8.80 27.45 25.81 17.99 62.44 31.73 21.11 19.18 1.78 18.51 17.86 4.27 10.76 3.79 42 E12_Aa NovelBoundary 1 110.61 127.94 21.08 50.04 112.14 62.41 78.74 46.04 12.85 32.50 45.06 157.85 84.90 55.27 76.89 44.52 41.51 8.29 32.38 25.82 2.47 65.83 11.69 43 ER12a ExonRegion 0 330.07 235.71 222.69 224.69 323.22 174.05 266.45 110.05 81.94 149.85 279.85 337.81 208.97 198.96 301.07 170.62 264.82 61.93 104.23 139.51 17.69 133.37 37.95 44 E12_Da NovelBoundary 0 58.83 102.09 17.27 18.01 88.12 50.48 122.99 72.54 33.28 53.16 33.53 95.28 18.67 23.49 68.11 39.39 4.77 9.87 9.41 29.72 0.00 3.12 0.00 45 E12a_E13a KnownJunction 1 472.31 186.28 270.10 266.60 321.73 138.61 232.60 109.34 82.03 149.67 224.74 271.59 206.48 151.92 340.07 172.69 266.39 27.36 130.36 132.12 17.24 158.10 34.83 46 E13_Aa NovelBoundary 0 172.92 213.25 127.52 127.96 242.87 98.47 234.64 129.18 46.56 245.79 288.13 548.88 274.82 300.20 337.10 113.90 132.87 18.90 22.68 136.40 5.50 55.17 3.76 47 ER13a ExonRegion 0 99.52 52.21 62.00 56.30 41.68 33.12 53.50 26.53 22.05 39.51 47.80 87.42 52.40 49.13 88.85 32.62 49.99 5.94 20.83 35.41 2.86 34.12 8.87