Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GAB1 Gene 0 35.69 44.69 20.63 26.11 32.09 56.73 20.14 19.20 34.64 23.90 31.89 85.93 77.42 43.66 13.23 10.85 71.67 24.91 13.86 29.21 21.83 38.90 19.66 2 262995 Transcript 0 14.37 37.00 9.07 11.42 8.19 22.16 14.13 13.08 25.79 9.91 14.27 11.40 25.18 21.80 0.41 0.61 25.77 24.98 25.57 21.89 30.35 22.09 15.33 3 262994 Transcript 1 22.89 28.42 14.67 9.09 16.38 25.78 10.42 10.43 42.56 19.58 44.64 108.94 111.84 81.46 0.00 24.52 139.50 21.56 17.32 14.51 88.90 51.93 7.09 4 ER1a ExonRegion 0 1.28 2.09 0.43 0.91 0.95 7.52 2.01 1.34 3.40 3.31 4.74 4.09 3.88 12.46 3.29 0.70 12.31 6.49 2.97 6.80 11.13 4.77 3.27 5 E1a_E2a KnownJunction 1 11.11 17.56 3.10 5.09 0.00 27.43 8.57 4.39 22.48 5.08 35.01 49.22 6.82 48.62 0.00 0.00 72.09 25.66 3.48 26.14 27.37 17.82 13.66 6 I1_SR2 SilentIntronRegion 0 0.00 2.03 0.79 2.34 0.76 0.00 3.59 0.00 4.23 0.00 1.93 19.17 0.00 1.62 2.49 0.00 0.47 0.40 0.00 1.22 0.00 0.00 0.00 7 I1_AR22 ActiveIntronRegion 0 12.93 5.65 2.45 2.73 2.68 5.50 11.33 5.19 0.00 3.44 3.65 5.29 14.07 0.00 5.80 5.94 18.34 1.44 9.56 2.84 2.20 0.00 0.00 8 I1_AR26 ActiveIntronRegion 0 4.53 1.15 2.61 2.85 1.89 0.00 4.09 0.00 1.65 1.30 0.82 18.16 14.52 0.90 0.34 0.84 6.35 0.31 0.45 3.23 0.95 0.27 1.46 9 I1_AR28 ActiveIntronRegion 0 7.51 1.78 9.04 5.43 2.74 1.61 3.59 2.21 1.62 2.07 4.76 9.67 5.43 2.71 3.80 4.09 15.92 3.40 7.08 6.48 6.61 1.37 2.66 10 I1_SR13 SilentIntronRegion 0 17.92 2.17 6.82 4.35 9.63 4.02 6.21 3.66 2.77 2.49 1.65 14.25 14.79 2.09 2.78 7.60 18.11 1.55 4.16 5.17 3.99 1.24 5.04 11 I1_AR29 ActiveIntronRegion 0 17.10 1.61 6.06 13.81 3.66 1.98 6.86 3.96 2.80 2.23 5.80 9.00 23.45 2.74 6.87 7.35 23.28 0.29 5.20 8.85 3.77 3.56 3.63 12 I1_AR30 ActiveIntronRegion 0 3.58 2.09 3.34 5.93 2.31 0.70 2.40 2.61 1.26 1.91 3.79 8.80 8.06 1.87 1.17 2.18 14.63 1.16 2.09 4.32 1.06 0.52 2.84 13 I1_AR32 ActiveIntronRegion 0 5.41 2.55 2.45 3.30 2.93 0.99 3.70 1.40 1.19 2.43 1.08 17.62 7.15 2.15 2.82 2.55 7.49 1.00 3.35 3.62 1.56 0.56 0.00 14 I1_AR43 ActiveIntronRegion 0 1.13 0.00 5.35 3.75 0.00 0.00 0.05 0.24 0.93 0.71 2.86 22.24 4.75 1.13 0.00 2.08 6.69 2.02 0.00 2.51 3.26 0.00 0.12 15 ER2a ExonRegion 0 16.08 15.16 10.99 12.09 19.72 45.14 16.94 12.47 44.59 16.09 57.55 96.19 115.14 78.16 13.36 16.54 148.92 43.97 18.86 33.09 34.30 55.91 30.66 16 E2a_E3a KnownJunction 0 6.59 24.60 7.54 10.65 18.42 59.68 9.94 8.58 53.88 20.95 65.86 123.94 170.93 87.23 21.51 19.31 185.60 54.55 17.60 45.38 44.23 59.89 65.90 17 I2_AR3 ActiveIntronRegion 0 3.42 1.81 2.02 2.38 2.97 0.45 3.04 5.01 4.06 1.86 1.43 18.09 7.90 1.03 0.36 1.17 5.18 1.58 1.45 1.84 1.63 0.93 1.45 18 ER3a ExonRegion 1 21.71 30.21 12.96 14.41 17.53 52.04 21.24 26.19 61.26 26.93 77.42 159.14 161.74 105.66 15.01 32.67 231.19 89.97 32.04 52.01 71.21 70.01 65.71 19 E3a_E4a KnownJunction 0 31.12 20.06 9.93 7.72 30.90 58.66 28.40 37.99 64.18 34.36 79.86 148.10 94.15 70.40 20.77 20.08 163.63 94.31 27.39 73.57 63.14 51.13 36.02 20 I3 Intron 0 4.19 1.70 1.09 1.67 2.31 1.99 2.60 1.58 3.02 1.88 2.21 12.03 15.73 5.32 1.30 1.70 8.96 1.33 1.69 3.23 2.18 2.18 1.84 21 I3_AR1 ActiveIntronRegion 0 2.01 0.04 1.67 1.69 3.40 0.00 1.45 0.47 3.38 4.30 2.18 7.91 12.66 5.47 0.59 5.04 14.87 1.18 2.64 1.69 2.01 2.08 2.62 22 I3_SR1 SilentIntronRegion 0 13.40 1.81 3.19 1.77 4.32 0.00 2.14 1.35 5.08 9.82 3.78 2.95 28.09 5.50 2.45 2.87 13.13 3.96 2.63 1.96 2.18 1.37 0.19 23 I3_SR3 SilentIntronRegion 0 5.33 3.16 1.29 0.00 0.95 5.56 3.32 0.85 5.31 2.25 1.93 7.85 30.08 5.62 1.35 2.86 7.41 1.51 6.54 4.94 1.69 2.93 2.90 24 I3_AR6 ActiveIntronRegion 1 1.19 0.89 0.00 0.00 0.00 5.21 0.79 0.00 0.62 0.00 0.00 11.64 26.82 3.86 0.00 0.37 0.93 0.00 4.28 2.46 0.00 1.37 0.00 25 E4_Aa NovelBoundary 0 3.78 0.00 6.27 0.00 3.23 0.00 0.00 0.00 6.31 2.47 2.63 12.60 21.59 7.06 0.00 0.00 26.74 0.00 0.00 9.65 2.97 0.00 3.84 26 ER4a ExonRegion 0 20.92 37.13 14.47 17.05 22.16 55.60 20.16 23.17 49.05 32.64 73.26 186.68 197.29 94.60 14.70 20.08 175.26 65.62 24.66 59.31 58.14 61.92 53.49 27 E4_Da NovelBoundary 0 0.00 2.76 3.40 0.00 7.98 0.00 3.80 0.00 3.21 6.39 15.53 32.71 22.89 2.47 0.00 0.00 25.25 7.01 8.28 0.00 0.00 0.00 7.94 28 E4a_E5a KnownJunction 0 32.82 51.77 19.40 14.62 39.64 58.72 14.62 32.94 46.53 36.64 91.23 171.81 134.24 81.58 8.90 40.76 166.81 75.86 54.78 109.11 47.14 120.63 56.17 29 I4_SR1 SilentIntronRegion 0 0.79 1.67 1.95 2.21 2.08 1.31 4.72 2.25 3.27 2.41 4.32 19.20 16.16 5.21 1.86 1.48 9.05 0.52 0.00 1.97 1.26 4.59 0.48 30 I4_AR2 ActiveIntronRegion 0 5.00 0.35 0.32 1.73 5.35 1.47 1.74 1.42 2.83 1.15 3.84 19.44 21.31 4.42 0.98 0.33 7.37 0.62 0.00 4.30 0.00 3.13 0.00 31 ER5a ExonRegion 0 21.90 67.82 20.82 15.53 29.06 56.68 15.35 31.61 46.85 40.17 86.06 212.70 208.27 86.19 18.08 21.98 170.50 47.12 28.22 83.08 49.66 74.91 53.30 32 E5a_E6a KnownJunction 1 40.30 80.84 23.62 25.70 6.79 80.86 37.80 31.42 42.27 29.95 47.59 286.44 218.01 76.34 10.51 8.72 134.92 35.61 13.93 60.59 46.77 73.36 24.50 33 I5_AR1 ActiveIntronRegion 0 1.39 1.62 0.00 0.57 2.28 0.73 1.26 2.05 0.59 1.23 3.64 10.35 17.48 1.46 2.06 0.00 8.07 0.00 0.00 0.27 0.00 0.00 0.00 34 E6_Aa NovelBoundary 0 16.52 0.00 0.00 2.06 0.00 0.00 4.42 8.21 7.61 1.07 1.95 25.96 21.91 4.83 0.00 0.00 15.99 2.57 0.00 0.00 2.78 2.76 0.00 35 ER6a ExonRegion 1 48.05 73.92 28.35 28.18 27.10 68.58 26.18 28.33 69.02 40.34 76.45 222.17 205.44 107.99 14.19 34.45 180.45 63.72 35.36 57.13 70.98 80.61 56.78 36 E6a_E7a KnownJunction 0 6.59 45.72 11.59 15.08 4.33 20.22 17.67 13.47 22.25 9.99 9.79 6.30 19.32 17.78 0.00 0.00 26.27 18.82 45.37 14.13 15.20 30.37 23.30 37 E6a_E8a KnownJunction 1 22.89 28.42 14.67 9.09 16.38 25.78 10.42 10.43 42.56 19.58 44.64 108.94 111.84 81.46 0.00 24.52 139.50 21.56 17.32 14.51 88.90 51.93 7.09 38 ER7a ExonRegion 0 16.51 31.93 7.96 11.31 3.60 33.66 13.81 12.79 23.34 11.32 19.03 15.30 28.45 20.54 1.22 1.82 33.63 29.05 19.57 26.50 37.68 29.77 15.34 39 E7a_E8a KnownJunction 0 20.00 33.35 7.66 7.86 16.64 12.61 10.91 12.98 31.77 8.41 14.00 12.60 27.76 27.08 0.00 0.00 17.39 27.07 11.77 25.06 38.18 6.12 7.34 40 ER8a ExonRegion 1 66.26 93.65 33.06 24.71 28.66 74.87 21.08 29.53 60.99 36.36 60.95 131.04 207.21 123.87 4.57 36.52 195.42 71.10 55.30 50.05 97.60 70.64 44.74 41 E8a_E9a KnownJunction 1 231.30 119.78 30.22 24.07 37.61 169.05 49.90 40.87 76.42 35.32 136.46 279.09 297.55 146.04 8.90 72.29 317.06 114.91 67.01 60.85 132.33 119.10 83.57 42 ER9a ExonRegion 1 51.09 51.22 36.51 20.98 27.62 101.18 27.88 21.68 46.08 32.16 58.61 127.54 163.39 99.77 9.90 26.73 162.97 75.98 27.82 48.32 92.45 46.39 30.27 43 E9a_E10a KnownJunction 1 50.60 41.05 29.21 23.51 19.19 98.64 32.50 18.24 46.04 25.98 55.12 117.79 180.99 114.02 9.52 20.34 158.11 79.59 36.14 53.12 82.29 35.15 18.18 44 ER10a ExonRegion 0 30.65 43.27 26.57 25.75 25.13 55.16 21.38 19.58 44.24 28.79 61.19 106.83 148.06 109.07 19.34 31.92 161.23 93.83 31.70 59.56 63.89 50.99 34.74 45 E10a_E11a KnownJunction 1 45.34 39.66 20.28 35.83 36.50 65.08 20.01 24.36 40.54 31.75 65.91 80.88 106.00 111.31 8.90 22.05 94.34 67.28 25.60 37.20 81.73 23.21 6.74 46 ER11a ExonRegion 0 40.69 48.29 22.78 30.73 37.95 59.94 21.30 19.41 31.08 23.40 21.46 67.34 50.68 28.28 13.92 6.86 41.36 12.24 9.62 22.76 8.84 33.19 11.29