Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NDUFC1 Gene 0 22.75 40.29 45.56 29.82 46.22 78.13 61.74 21.01 25.43 16.40 26.43 24.82 10.48 26.08 62.13 18.25 31.53 12.04 21.55 22.56 10.47 20.09 5.49 2 394228 Transcript 0 3.79 0.62 0.17 0.87 2.01 1.82 2.02 1.02 0.80 0.42 1.82 0.65 0.42 1.16 8.97 5.71 1.24 2.58 0.24 2.27 3.60 2.06 0.44 3 394225 Transcript 0 4.44 9.82 6.87 4.86 4.07 5.20 3.54 2.73 6.29 4.21 3.35 7.60 3.53 5.15 6.21 4.54 3.60 7.34 9.53 4.69 3.65 1.97 0.46 4 265500 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 18.22 1.53 0.68 1.47 8.91 7.52 9.93 3.86 3.45 1.92 8.70 2.58 1.45 5.45 17.77 22.99 6.19 4.35 1.19 10.36 14.68 10.16 2.20 6 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.90 3.76 0.00 0.00 0.00 0.00 2.59 0.00 0.00 7 Ix Intron 0 17.70 39.78 26.87 21.73 16.55 20.24 14.83 9.04 22.01 13.86 9.21 9.07 2.33 14.27 24.06 11.93 12.69 15.05 22.10 14.94 11.61 6.97 3.19 8 Ix_AR1 ActiveIntronRegion 0 17.75 39.91 26.96 21.80 16.61 20.30 14.88 9.07 22.08 13.91 9.24 9.10 2.34 14.31 24.14 11.96 12.74 15.10 22.18 14.99 11.64 6.99 3.20 9 E2_Aa NovelBoundary 0 91.57 109.72 77.76 61.90 47.71 59.11 20.93 18.15 54.25 47.41 9.69 30.01 6.82 31.96 63.54 51.35 35.34 32.91 55.15 23.91 6.24 20.27 3.50 10 ER2a ExonRegion 1 17.77 39.27 27.13 19.15 16.29 20.79 11.98 10.78 25.09 16.86 12.17 27.69 8.45 19.49 24.58 15.59 13.16 29.28 38.11 18.75 10.37 7.87 1.85 11 E2_Da NovelBoundary 1 3.41 0.00 2.93 3.36 4.33 0.00 0.00 0.00 1.79 4.19 2.58 37.81 6.82 9.24 0.00 4.36 14.12 0.00 8.85 8.88 0.00 2.69 3.24 12 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 13 E2a_E5a NovelJunction 0 30.67 31.38 26.23 29.20 16.98 14.76 6.01 18.73 47.42 24.98 4.90 6.30 0.00 12.07 13.60 0.00 0.00 36.40 34.92 14.70 9.45 0.00 0.00 14 Ix_AR2 ActiveIntronRegion 0 2.99 2.56 2.33 2.59 2.52 1.23 2.19 1.21 1.31 2.05 2.59 14.31 7.07 5.58 3.45 4.25 2.95 0.25 0.71 2.38 1.57 3.40 1.05 15 ER3a ExonRegion 0 0.00 0.00 0.33 0.30 0.00 0.00 2.18 0.12 0.06 0.00 1.24 2.72 0.00 1.10 0.25 2.57 1.23 0.09 0.00 0.00 1.08 0.00 0.00 16 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E4_Aa NovelBoundary 0 3.78 0.00 0.00 5.29 4.33 0.00 4.02 2.34 5.30 6.18 7.74 0.00 0.00 6.83 4.45 3.50 13.00 1.66 0.00 6.39 0.00 2.88 3.24 18 ER4a ExonRegion 1 0.12 0.00 0.00 0.23 0.74 0.15 0.00 0.00 0.00 0.00 0.00 0.36 0.00 0.00 13.30 1.57 0.00 2.67 0.00 0.06 0.73 0.00 0.00 19 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 4.31 0.00 0.00 0.00 0.00 0.00 20 ER5a ExonRegion 0 2.59 1.76 3.94 6.29 2.10 2.08 2.05 6.31 4.75 4.07 9.57 7.13 3.49 8.09 17.01 9.84 10.19 11.37 32.31 5.41 13.47 14.55 1.90 21 E5_Ab KnownBoundary 1 15.78 15.33 6.89 4.03 4.07 5.28 14.40 2.55 6.71 7.47 9.90 0.00 0.00 7.24 18.54 31.10 0.00 13.31 0.00 2.68 22.92 5.76 7.60 22 ER5b ExonRegion 0 36.33 130.93 1.58 2.31 83.31 286.85 264.66 0.00 0.61 0.97 0.11 1.75 0.00 2.97 11.16 11.49 0.00 5.95 0.21 1.84 0.02 0.90 2.03 23 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER6a ExonRegion 0 8.34 11.95 62.51 49.33 39.85 45.10 14.64 20.36 23.94 11.57 9.33 18.90 5.46 47.13 127.79 28.75 12.60 12.99 29.19 16.71 2.99 28.95 14.23 25 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 Ix_SR1 SilentIntronRegion 0 10.81 4.04 10.47 7.62 11.26 4.11 7.26 3.22 4.92 3.15 1.65 5.08 2.05 3.40 7.75 3.31 2.64 1.89 2.38 3.86 1.22 1.61 0.40 27 ER7a ExonRegion 1 10.34 4.19 143.78 73.39 3.65 0.07 0.84 74.19 76.41 47.52 107.52 48.87 17.70 61.92 149.12 21.32 138.43 2.38 20.94 63.99 22.37 53.81 7.45 28 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER8a ExonRegion 0 74.11 113.30 148.63 94.94 197.06 271.72 205.50 66.43 72.15 47.96 84.20 78.04 41.48 70.74 184.26 32.92 101.45 8.83 30.31 66.12 17.57 56.83 16.56 30 ER8b ExonRegion 0 12.70 12.20 3.68 5.84 2.68 6.03 2.08 3.46 2.12 3.28 6.35 11.13 4.69 5.57 12.43 7.22 2.83 2.38 1.82 4.26 1.26 3.57 0.00 31 ER8c ExonRegion 0 0.60 1.60 0.18 2.63 0.38 1.44 0.19 1.23 0.53 0.16 0.41 0.31 0.67 0.35 0.41 0.21 0.00 1.58 0.00 0.91 0.00 0.15 0.00