Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ARHGAP10 Gene 0 25.19 13.31 16.06 14.10 12.42 17.14 30.10 11.22 18.04 6.51 72.70 123.14 156.83 48.60 72.92 63.01 133.25 12.27 20.90 9.70 149.68 82.19 50.49 2 336498 Transcript 0 15.68 4.28 12.31 12.38 6.16 16.62 8.69 12.24 7.48 5.69 36.80 31.34 35.97 29.69 68.53 42.51 79.72 11.54 17.74 10.90 116.91 36.34 34.79 3 414545 Transcript 0 3.48 3.09 9.34 4.99 0.00 0.00 0.00 4.07 6.16 1.32 4.79 6.75 0.00 6.77 39.19 12.65 25.34 0.00 8.94 2.62 27.55 18.00 11.52 4 ER1a ExonRegion 0 12.22 13.51 1.62 3.62 5.66 2.02 6.83 1.86 7.60 2.45 27.68 20.16 30.67 25.08 23.15 22.31 51.14 3.94 16.59 7.68 89.77 27.88 19.51 5 E1a_E2a KnownJunction 0 45.12 18.62 2.54 7.79 15.37 7.04 18.24 1.85 6.63 6.50 56.59 42.16 61.85 20.54 24.23 35.80 100.89 6.88 12.71 13.74 90.87 50.82 18.95 6 I1_AR4 ActiveIntronRegion 1 3.37 2.26 6.45 2.64 3.88 0.58 13.71 2.61 7.88 0.50 1.45 25.95 37.33 0.19 13.42 8.23 14.15 0.40 2.40 1.23 3.59 3.92 7.37 7 I1_AR5 ActiveIntronRegion 0 2.25 3.94 0.00 0.00 0.00 3.48 10.16 0.00 0.00 0.00 3.59 2.83 31.39 0.00 8.41 5.82 12.60 0.00 2.60 2.26 2.29 0.00 5.03 8 ER2a ExonRegion 0 16.65 29.57 5.59 6.66 2.29 5.06 13.23 5.22 10.38 4.97 49.39 88.44 112.51 31.25 27.83 29.66 85.07 9.08 12.61 7.20 103.62 45.29 23.95 9 E2a_E3a KnownJunction 1 33.19 27.56 9.82 7.59 0.00 2.90 19.34 0.00 15.42 2.77 44.91 167.60 136.84 32.84 39.31 21.53 138.29 1.78 33.51 6.33 100.08 51.07 26.38 10 ER3a ExonRegion 0 13.28 11.58 8.54 4.35 6.47 1.80 13.69 3.01 13.45 4.14 52.00 117.94 198.72 36.99 35.66 44.34 89.98 0.36 21.63 6.49 90.71 92.15 35.00 11 E3a_E4a KnownJunction 0 20.82 6.71 17.21 1.63 23.77 5.34 25.84 7.35 11.92 7.31 61.44 148.70 243.17 41.73 66.14 76.30 54.23 0.00 13.27 6.39 37.75 128.59 35.08 12 E3a_E5a NovelJunction 1 6.89 0.00 0.00 0.00 0.00 5.68 0.00 1.56 0.00 1.42 2.26 0.00 6.82 0.00 19.28 0.00 8.70 0.00 0.00 3.07 6.30 0.00 0.00 13 I3_SR2 SilentIntronRegion 0 1.37 3.88 1.54 2.37 0.00 0.78 6.40 3.46 3.91 0.00 2.29 18.60 22.15 1.56 3.17 0.17 8.62 0.00 5.78 0.00 2.65 0.00 14.09 14 I3_AR7 ActiveIntronRegion 0 10.58 3.70 1.23 0.00 1.95 0.00 13.48 1.73 2.47 0.00 0.00 3.54 0.00 2.21 0.00 0.00 6.60 0.00 0.00 0.00 0.20 2.08 5.87 15 I3_AR8 ActiveIntronRegion 0 12.51 2.03 1.23 0.00 2.68 0.00 14.56 1.73 2.47 0.00 0.00 4.33 0.00 3.25 0.00 0.00 8.70 1.68 0.00 0.00 2.20 1.52 8.54 16 I3_AR9 ActiveIntronRegion 0 11.64 2.03 1.23 0.00 2.68 0.00 14.56 1.73 1.24 0.00 0.00 3.71 0.00 1.62 0.00 0.00 6.60 1.85 0.00 0.00 2.20 0.00 8.81 17 ER4a ExonRegion 1 12.43 11.30 11.22 3.65 13.90 7.64 27.40 6.89 13.67 7.93 45.13 199.28 241.99 36.16 46.58 37.85 101.78 0.31 11.46 9.81 41.90 90.11 33.85 18 E4a_E5a KnownJunction 1 24.52 24.54 8.66 5.89 7.89 0.00 30.56 4.64 11.08 9.03 57.80 267.69 227.26 34.02 37.70 16.66 121.36 1.78 14.02 5.62 49.24 66.19 20.06 19 ER5a ExonRegion 1 29.36 37.20 12.63 6.69 18.23 23.75 30.71 11.20 12.62 6.47 84.08 273.61 342.42 38.58 55.89 41.26 152.75 2.86 17.39 7.88 66.50 100.95 34.09 20 E5a_E6a KnownJunction 1 52.53 27.76 11.06 6.79 40.07 34.41 18.59 13.84 20.14 5.99 77.97 324.11 374.33 71.11 73.18 74.34 220.20 4.68 27.29 8.95 84.82 79.42 42.08 21 E6_Aa NovelBoundary 0 0.00 3.35 1.24 1.47 0.00 0.00 2.25 1.73 1.68 0.00 2.21 0.00 6.82 0.00 0.00 0.00 4.21 2.36 13.55 0.00 0.00 3.06 0.00 22 ER6a ExonRegion 0 20.17 13.63 12.08 9.04 7.95 12.70 34.63 10.70 15.49 6.61 96.75 293.08 327.80 54.39 66.15 51.22 193.71 8.36 16.16 12.52 102.18 86.31 49.02 23 E6a_E7a KnownJunction 0 14.30 11.77 12.89 11.75 7.22 18.85 17.53 11.50 13.05 10.56 135.98 358.32 435.69 67.75 78.37 69.55 215.05 8.00 21.74 11.57 112.93 123.94 61.03 24 ER7a ExonRegion 1 21.65 8.44 13.39 11.06 10.40 25.67 34.04 13.75 16.84 6.97 98.17 299.85 361.09 59.67 69.91 77.98 169.89 9.06 20.99 8.06 131.76 105.94 61.05 25 E7a_E8a KnownJunction 0 18.08 28.94 21.88 11.25 23.09 30.32 42.71 12.86 22.77 9.16 91.65 245.78 355.50 80.58 79.24 74.51 149.70 15.38 24.38 12.66 115.71 69.74 64.28 26 ER8a ExonRegion 0 26.20 22.67 15.75 10.15 24.00 18.83 45.64 13.36 20.10 7.66 93.86 229.16 265.24 52.57 61.89 70.39 153.44 13.47 18.03 11.10 160.79 94.54 52.23 27 E8a_E9a KnownJunction 0 19.71 35.52 9.52 12.89 23.01 9.88 38.69 6.57 23.76 7.87 84.86 268.14 305.50 50.09 105.32 66.22 173.07 19.77 31.53 11.12 152.47 121.55 56.17 28 ER9a ExonRegion 0 34.36 19.90 16.88 19.31 14.60 21.41 45.18 18.40 25.57 7.97 83.22 237.96 247.65 74.28 76.30 90.05 176.80 20.67 31.44 11.51 208.43 109.38 79.21 29 E9_Da NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 17.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.03 0.00 0.00 30 E9a_E10a KnownJunction 0 53.42 8.88 19.66 25.04 29.03 22.37 48.05 12.69 24.80 5.86 71.60 174.06 156.81 65.57 36.59 142.87 176.72 20.52 45.18 11.63 193.42 158.66 105.34 31 ER10a ExonRegion 0 22.50 16.53 10.53 17.52 19.69 23.13 62.92 12.74 24.72 7.99 83.36 181.66 207.74 76.21 75.46 84.63 212.96 15.99 37.49 9.94 220.32 106.92 75.49 32 E10a_E11a KnownJunction 0 14.82 19.47 10.29 15.92 35.06 11.02 79.32 11.62 28.07 6.04 53.28 132.49 177.75 70.46 74.29 48.19 155.49 8.83 27.77 8.18 229.13 95.28 50.79 33 ER11a ExonRegion 0 28.34 24.20 10.39 21.64 16.28 12.97 37.36 14.84 22.11 4.74 76.63 164.52 174.85 63.78 69.74 65.42 145.20 8.41 28.36 11.83 206.02 98.71 59.81 34 E11a_E12a KnownJunction 0 59.79 38.68 15.14 17.81 6.45 17.43 31.53 13.55 16.44 1.40 97.97 114.64 284.56 68.34 69.10 121.16 202.80 15.75 31.72 20.71 222.03 144.08 76.57 35 ER12a ExonRegion 0 24.43 22.10 17.87 14.75 8.84 21.37 39.86 12.51 23.01 6.78 100.05 127.53 201.67 72.20 55.50 100.73 192.17 21.77 17.73 15.36 225.83 108.71 47.05 36 E12a_E13a KnownJunction 0 26.23 21.18 17.86 14.08 7.30 26.97 37.94 10.31 24.80 12.22 85.81 210.97 189.76 65.16 75.16 81.94 219.92 17.24 4.80 15.08 202.94 102.08 39.01 37 ER13a ExonRegion 0 53.62 23.97 15.91 16.52 18.32 28.28 40.30 12.88 26.41 7.45 95.09 180.79 239.55 72.81 81.24 75.29 187.50 18.76 26.74 10.06 202.21 117.47 71.50 38 E13a_E14a KnownJunction 0 65.12 29.47 18.27 21.38 37.27 32.20 56.09 12.73 21.76 4.57 109.55 247.28 280.34 74.28 99.02 90.75 173.91 20.89 54.31 13.74 213.63 114.87 55.83 39 ER14a ExonRegion 0 46.34 11.96 13.53 16.97 31.86 24.89 50.80 10.58 20.39 3.47 105.02 190.79 264.71 61.76 63.25 88.97 175.04 14.68 35.97 16.43 154.99 127.68 71.07 40 E14a_E15a KnownJunction 1 63.42 12.50 16.14 15.75 15.87 30.49 70.40 14.05 33.82 4.84 74.12 168.65 342.51 90.82 67.87 109.37 171.01 23.21 23.44 6.26 128.25 119.47 102.78 41 ER15a ExonRegion 0 33.65 12.96 16.58 19.92 16.60 18.48 49.36 15.85 32.60 6.22 98.18 163.39 275.06 68.75 60.66 84.64 216.58 18.69 30.66 18.21 196.06 122.08 80.89 42 E15a_E16a KnownJunction 1 45.93 15.39 29.57 13.29 22.84 17.43 88.19 17.87 17.42 9.51 101.45 94.23 326.11 58.45 69.97 70.32 232.63 14.96 41.51 18.66 179.77 145.06 56.17 43 ER16a ExonRegion 0 27.48 12.89 28.06 14.78 12.38 31.24 68.73 14.68 23.99 8.46 97.07 247.88 262.32 67.22 72.24 72.79 193.24 14.22 44.49 16.95 199.49 137.41 62.81 44 E16a_E17a KnownJunction 1 16.45 5.99 29.06 21.61 4.24 35.89 53.17 14.25 37.21 4.35 60.96 249.23 239.43 64.51 77.63 78.61 111.73 13.10 51.95 20.52 180.76 135.02 101.41 45 ER17a ExonRegion 0 38.98 17.02 19.94 21.42 23.30 27.54 47.43 20.99 30.90 13.75 109.97 220.39 353.61 79.81 104.45 127.04 209.11 22.78 35.82 21.20 194.70 152.08 96.77 46 E17a_E18a KnownJunction 0 69.05 17.37 21.91 30.57 12.65 24.82 75.56 22.67 23.23 12.52 127.35 200.02 413.12 98.71 104.46 202.85 202.15 28.73 33.98 21.35 257.92 215.79 106.28 47 ER18a ExonRegion 0 33.06 10.41 27.63 21.24 15.22 20.57 49.97 15.12 29.08 10.62 113.16 161.11 243.53 74.27 103.36 98.75 202.86 21.39 23.29 10.24 231.83 110.26 72.46 48 E18a_E19a KnownJunction 0 78.68 29.67 25.96 28.77 26.66 13.51 66.46 28.30 40.39 11.52 114.19 200.32 254.37 116.84 225.85 203.79 220.57 26.99 29.37 12.02 287.45 221.36 113.53 49 ER19a ExonRegion 0 40.23 15.37 25.14 24.51 12.94 22.88 42.09 10.52 24.20 8.27 77.99 113.51 176.11 57.75 100.18 83.55 136.65 21.85 21.26 8.69 183.19 99.72 66.53 50 E19a_E20a KnownJunction 0 27.12 12.10 17.98 15.22 11.97 25.67 42.48 5.46 30.96 11.87 75.86 89.28 142.69 33.02 84.80 56.31 74.80 18.49 3.76 9.01 148.57 57.56 50.45 51 ER20a ExonRegion 0 32.87 9.28 26.69 20.37 10.07 20.68 28.99 7.59 21.51 13.58 67.94 69.22 85.24 52.23 97.01 81.71 132.63 22.03 19.07 11.20 188.87 84.68 66.06 52 E20a_E21a KnownJunction 0 22.67 3.35 13.93 12.52 11.04 12.72 5.70 16.76 4.05 11.79 29.27 42.61 45.78 44.44 81.09 42.55 92.66 8.17 17.79 9.01 90.19 42.92 39.44 53 E20a_E22a KnownJunction 1 3.48 3.09 9.34 4.99 0.00 0.00 0.00 4.07 6.16 1.32 4.79 6.75 0.00 6.77 39.19 12.65 25.34 0.00 8.94 2.62 27.55 18.00 11.52 54 ER21a ExonRegion 0 17.64 6.13 11.88 13.27 7.45 21.29 10.53 8.08 9.74 4.09 50.61 20.03 42.18 29.46 68.87 37.37 69.45 16.12 8.62 10.28 131.10 45.46 37.77 55 E21a_E22a KnownJunction 0 6.74 3.35 11.12 11.35 0.00 15.84 9.85 11.87 8.65 1.18 30.53 31.36 19.97 15.19 55.63 47.59 77.05 10.32 26.82 13.42 129.42 20.64 27.15 56 ER22a ExonRegion 0 28.55 13.06 18.10 13.81 11.14 14.77 25.20 14.52 21.36 6.59 68.91 38.54 50.11 48.81 98.20 56.73 127.41 12.37 21.61 8.39 208.20 74.12 46.06 57 E22a_E23a KnownJunction 0 44.01 14.54 6.18 14.38 11.80 16.81 33.30 11.95 31.22 5.43 63.44 25.81 76.62 57.74 115.33 57.68 130.43 12.73 31.34 8.63 179.40 66.93 46.69 58 ER23a ExonRegion 0 17.77 5.85 16.77 12.89 8.80 13.55 15.08 10.74 12.44 4.02 53.72 25.46 21.98 30.68 78.43 46.70 87.58 7.06 16.41 5.71 118.34 50.69 33.41