Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GPRIN3 Gene 0 1.21 0.31 1.07 2.12 2.36 10.48 3.73 1.88 2.98 2.11 0.00 2.65 0.00 0.02 0.00 0.00 0.40 0.86 1.25 0.24 0.25 5.60 2.95 2 333209 Transcript 0 3.18 0.11 0.45 1.97 0.95 8.07 1.64 1.66 4.58 1.55 0.00 3.03 0.00 0.01 0.00 0.00 0.41 6.86 3.52 0.34 3.41 5.84 4.33 3 IG45_AR22 ActiveIntergenicRegion 0 7.23 33.31 6.92 10.10 22.28 104.39 17.77 24.47 21.04 12.63 0.00 0.00 2.39 0.00 0.00 0.00 0.00 1.35 2.92 11.33 1.71 5.42 0.73 4 IG45_SR19 SilentIntergenicRegion 0 10.22 42.78 13.95 27.67 20.86 97.67 18.82 50.47 36.96 19.89 0.00 0.00 1.26 0.00 0.00 0.00 1.07 0.91 1.08 23.15 2.72 2.24 2.98 5 IG45_AR21 ActiveIntergenicRegion 0 6.35 30.21 15.75 25.51 27.14 91.69 14.56 35.06 32.29 15.89 0.00 0.00 2.68 0.00 0.00 0.00 2.36 1.85 3.19 19.76 2.83 0.00 2.94 6 IG45_SR18 SilentIntergenicRegion 0 11.57 50.92 18.69 19.06 25.37 124.60 29.00 53.23 37.32 29.38 0.00 0.00 3.42 0.00 0.00 0.00 0.97 0.43 4.33 14.67 2.03 4.30 2.72 7 IG45_AR20 ActiveIntergenicRegion 0 6.62 25.89 14.51 16.63 10.90 64.16 17.16 39.02 29.47 24.47 0.00 0.00 2.59 0.00 0.00 0.00 0.74 3.75 8.14 13.31 3.69 5.35 2.59 8 ER1a ExonRegion 0 1.55 0.00 0.24 1.10 0.34 5.88 1.02 0.47 3.24 0.78 0.00 0.11 0.00 0.00 0.00 0.00 0.85 4.47 4.75 0.82 1.15 7.12 6.36 9 E1a_E2a KnownJunction 0 6.82 0.00 0.00 2.63 0.00 7.55 0.00 2.55 7.52 1.67 0.00 6.15 0.00 0.00 0.00 0.00 0.00 15.50 4.80 0.00 8.90 4.90 3.93 10 I1_AR3 ActiveIntronRegion 0 13.67 0.97 2.95 1.54 5.59 1.04 8.55 2.45 1.57 0.81 0.00 5.56 0.00 0.00 0.00 0.00 0.00 0.52 0.00 0.40 0.21 1.19 0.84 11 I1_SR3 SilentIntronRegion 0 19.77 0.32 1.89 4.80 9.03 0.58 8.32 2.43 0.43 1.61 0.00 0.56 0.00 0.00 0.00 0.00 0.00 0.00 1.00 0.00 0.00 0.00 0.92 12 I1_AR4 ActiveIntronRegion 0 20.46 0.62 4.00 4.00 12.83 1.40 7.85 2.35 2.39 0.52 0.00 0.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 I1_SR1 SilentIntronRegion 0 131.96 1.28 4.04 8.53 26.58 4.19 6.66 2.09 6.20 2.54 0.00 0.00 0.00 0.00 0.00 0.00 0.14 0.02 6.58 0.00 0.00 0.61 0.00 14 I1_AR1 ActiveIntronRegion 0 74.86 3.25 13.91 15.11 38.00 8.02 16.64 6.10 4.23 4.99 0.00 0.82 0.00 0.00 0.00 0.00 1.49 2.75 3.04 0.25 0.25 0.11 1.69 15 ER2a ExonRegion 0 1.18 0.33 1.13 2.19 2.50 10.79 3.91 1.97 2.97 2.20 0.00 2.82 0.00 0.02 0.00 0.00 0.37 0.62 1.02 0.20 0.19 5.50 2.72 16 IG44_AR5 ActiveIntergenicRegion 0 26.52 9.25 27.47 37.29 46.56 109.84 40.80 25.33 31.96 27.49 0.00 15.23 0.00 0.02 0.10 0.00 3.71 9.20 12.66 1.75 2.46 48.44 23.28 17 IG44_SR4 SilentIntergenicRegion 0 11.19 2.03 9.80 4.09 7.26 27.77 11.92 7.16 9.00 2.29 0.00 1.86 0.00 0.00 0.00 0.00 6.60 1.85 0.00 2.13 0.00 37.80 11.75 18 IG44_AR4 ActiveIntergenicRegion 0 36.64 4.05 22.39 41.00 59.41 77.91 37.97 24.20 24.22 24.31 0.00 11.68 0.00 0.00 0.11 0.00 3.39 4.53 15.24 1.33 1.64 51.45 25.10 19 IG44_AR3 ActiveIntergenicRegion 0 20.11 4.36 20.13 25.80 44.72 54.62 26.48 11.48 15.00 18.19 0.00 5.88 0.00 0.00 0.00 0.00 3.30 1.85 21.16 0.00 2.20 37.50 18.88 20 IG44_SR3 SilentIntergenicRegion 0 42.02 5.66 29.69 34.31 68.47 73.29 30.76 26.54 25.17 27.50 0.00 7.89 0.00 0.00 0.31 0.00 1.85 4.04 13.90 0.36 1.52 49.96 22.28 21 IG44_AR2 ActiveIntergenicRegion 0 42.56 4.53 20.71 22.82 45.51 54.81 17.37 24.69 18.82 18.44 0.00 3.91 0.00 0.00 0.00 0.00 0.99 3.22 3.22 0.69 1.02 33.43 16.20 22 IG44_SR2 SilentIntergenicRegion 0 33.81 2.83 13.71 17.68 27.72 39.18 12.63 16.20 12.22 9.30 0.00 0.00 0.00 0.00 0.00 0.00 1.04 2.36 5.53 0.34 0.70 10.14 10.25 23 IG44_AR1 ActiveIntergenicRegion 0 24.85 1.59 10.82 11.68 20.19 31.51 10.19 10.99 8.22 7.18 0.00 0.39 0.00 0.00 0.00 0.00 0.00 0.88 2.08 0.46 1.20 8.86 6.36