Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NDST3 Gene 0 6.27 13.36 38.16 32.61 6.08 7.58 13.87 1.64 35.03 15.40 0.48 1.28 1.29 0.89 2.28 2.07 1.29 5.42 13.59 9.63 1.15 0.48 1.88 2 394488 Transcript 0 1.24 3.06 16.76 5.03 1.73 2.22 2.84 0.17 6.72 6.81 0.00 0.00 0.21 0.00 0.00 0.00 0.00 2.83 2.83 6.75 0.00 0.00 0.00 3 433996 Transcript 0 0.00 0.00 2.08 0.00 0.00 0.00 2.08 0.00 0.69 2.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 296499 Transcript 0 1.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 394492 Transcript 0 0.08 0.47 2.69 1.52 1.85 0.07 0.25 0.00 1.43 0.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.14 0.25 1.72 0.00 0.00 0.00 6 ER1a ExonRegion 0 0.36 1.54 3.96 1.50 0.07 2.68 2.01 0.00 3.28 2.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.94 3.90 2.75 0.00 0.00 0.00 7 E1a_E3b KnownJunction 0 0.00 5.53 10.94 6.66 3.31 2.73 0.00 0.00 11.66 13.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.27 4.14 10.67 0.00 0.00 0.00 8 E2_Aa NovelBoundary 0 0.00 2.70 5.26 0.00 3.57 0.00 5.43 0.00 1.48 3.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.92 0.00 0.00 0.00 9 ER2a ExonRegion 0 1.75 2.96 13.89 5.11 1.10 1.13 4.08 0.53 10.59 3.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.62 6.73 0.45 0.00 0.00 10 E2a_E3b KnownJunction 0 0.00 0.00 16.08 4.69 0.00 0.00 0.00 0.00 8.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.82 0.00 0.00 0.00 11 ER3a ExonRegion 0 0.08 0.47 2.69 1.52 1.85 0.07 0.25 0.00 1.43 0.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.14 0.25 1.72 0.00 0.00 0.00 12 ER3b ExonRegion 0 6.55 12.72 68.55 29.54 5.10 6.76 20.57 1.33 50.81 17.36 0.00 0.00 0.00 0.00 0.00 0.27 0.00 5.14 18.93 19.77 0.40 0.19 0.00 13 E3_Da KnownBoundary 0 6.22 6.51 43.20 3.23 0.00 0.00 24.51 0.00 14.06 3.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 0.00 15.21 0.00 0.00 0.00 14 E3a_E4a KnownJunction 0 3.78 15.72 48.05 39.62 0.00 5.17 13.69 4.15 48.15 10.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.95 18.73 3.26 0.00 0.00 0.00 15 E3a_E6a KnownJunction 0 0.00 0.00 1.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER3c ExonRegion 0 3.36 2.13 35.38 6.93 1.80 1.24 6.49 0.52 5.23 4.59 0.00 0.00 0.63 0.00 0.00 0.00 0.00 0.28 0.46 6.82 0.00 0.00 0.00 17 ER4a ExonRegion 0 1.64 10.79 49.49 29.19 1.67 5.02 19.38 1.55 38.34 17.91 0.00 0.00 0.00 0.66 0.00 0.00 0.00 2.06 18.06 15.86 0.85 0.00 0.00 18 E4a_E5a KnownJunction 0 3.41 11.97 43.85 29.63 0.00 2.67 23.05 2.55 33.59 14.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.60 14.02 5.88 2.97 0.00 0.00 19 ER5a ExonRegion 0 5.27 13.16 41.15 28.00 3.52 3.38 18.26 0.40 36.93 14.88 0.00 1.17 0.00 0.44 0.00 0.00 0.00 7.92 31.40 10.62 0.97 0.00 0.00 20 E5a_E6a KnownJunction 0 7.19 8.22 27.62 29.30 0.00 0.00 8.26 0.00 40.34 11.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.68 8.47 9.46 0.00 0.00 0.00 21 ER6a ExonRegion 0 2.29 9.18 31.56 28.92 1.68 12.48 16.66 0.71 41.03 14.53 0.00 0.00 2.35 0.00 0.00 0.00 0.91 9.97 30.23 14.76 0.00 0.00 0.00 22 E6a_E7a KnownJunction 0 7.41 10.33 19.63 25.60 3.90 7.27 8.26 0.00 39.96 15.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.35 17.13 0.00 0.00 0.00 0.00 23 ER7a ExonRegion 0 4.82 11.21 28.38 23.14 3.92 6.85 11.36 1.05 36.96 14.54 0.00 0.00 0.00 0.00 0.00 0.00 1.31 4.83 17.14 8.61 0.87 0.00 0.00 24 E7a_E8a KnownJunction 0 0.00 5.92 8.07 15.22 0.00 15.50 6.49 0.00 13.34 7.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.22 7.34 2.49 0.00 0.00 0.00 25 I7_SR1 SilentIntronRegion 0 0.86 1.73 13.67 7.55 0.91 0.38 5.22 0.40 4.96 1.36 0.00 0.70 0.74 0.25 0.00 0.04 0.17 1.19 2.53 10.09 0.20 0.08 0.00 26 I7_AR1 ActiveIntronRegion 0 2.20 1.06 19.11 10.02 0.75 0.73 8.62 0.72 9.06 1.73 0.00 0.50 0.00 0.19 0.00 0.00 0.00 0.38 2.67 8.91 0.00 0.00 0.00 27 ER8a ExonRegion 0 1.26 6.89 17.09 21.02 6.26 8.38 9.70 0.70 23.17 12.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.20 11.44 4.74 0.61 0.00 0.00 28 E8a_E9a KnownJunction 0 7.26 14.67 13.99 30.00 4.33 7.89 14.49 0.00 37.33 12.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.14 8.19 6.01 0.00 0.00 0.00 29 ER9a ExonRegion 0 2.47 7.76 19.39 20.92 2.79 12.23 16.56 0.00 25.96 15.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.61 14.65 4.12 0.00 0.00 0.00 30 E9a_E10a KnownJunction 0 6.89 0.00 14.87 19.08 6.88 7.15 16.74 0.00 30.15 12.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.09 13.37 0.00 0.00 0.00 0.00 31 E10_Aa NovelBoundary 0 3.04 2.70 26.11 20.41 3.40 0.00 8.74 0.00 12.73 8.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 13.18 2.43 0.00 0.00 0.00 32 ER10a ExonRegion 0 3.70 11.69 23.22 29.18 2.78 3.99 8.39 0.37 29.15 10.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.56 16.92 4.55 0.00 0.00 0.00 33 E10_Da KnownBoundary 0 0.00 15.59 33.03 34.53 0.00 10.73 7.82 1.97 34.26 8.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.78 3.95 2.75 0.00 0.00 0.00 34 E10a_E11a KnownJunction 0 0.00 0.00 2.66 0.00 0.00 0.00 4.15 0.00 1.39 4.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 ER10b ExonRegion 0 3.56 10.95 18.32 22.43 0.30 8.09 4.99 1.73 25.88 7.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.19 7.09 3.05 0.00 0.00 0.00 36 E10_Db NovelBoundary 0 0.00 3.29 20.37 15.18 0.00 0.00 0.00 0.00 8.10 4.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.95 5.88 0.00 0.00 0.00 37 E10b_E11a KnownJunction 0 9.11 12.83 11.15 14.05 0.00 4.66 4.42 1.89 16.98 5.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.23 13.65 3.26 0.00 0.00 0.00 38 E11_Aa NovelBoundary 0 0.00 9.67 23.45 39.02 0.00 0.00 4.37 0.00 18.03 2.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.58 5.94 0.00 0.00 0.00 39 ER11a ExonRegion 0 6.12 11.18 19.87 28.06 5.38 9.32 10.69 1.63 34.29 10.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.23 22.70 7.15 0.64 0.61 0.00 40 E11_Da NovelBoundary 0 0.00 3.35 16.59 5.56 4.33 0.00 0.00 0.00 11.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.42 2.56 0.00 0.00 0.00 41 E11a_E12a KnownJunction 0 6.59 3.35 19.60 23.87 0.00 0.00 8.83 0.00 29.80 15.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 22.87 0.00 0.00 0.00 0.00 42 ER12a ExonRegion 0 1.88 8.40 8.33 15.69 3.19 5.23 6.29 0.79 30.46 10.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.62 11.79 4.44 0.00 0.62 0.00 43 E12_Da NovelBoundary 0 0.00 0.00 0.00 4.49 0.00 0.00 2.21 0.00 14.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.39 4.71 3.00 0.00 0.00 0.00 44 E12a_E13a KnownJunction 0 3.78 3.29 14.61 12.19 0.00 8.23 0.00 0.00 28.50 5.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.02 12.24 0.00 0.00 0.00 0.00 45 ER13a ExonRegion 0 6.06 4.70 7.91 14.72 2.48 5.52 6.97 0.19 27.32 7.86 0.00 3.31 0.00 0.00 0.00 0.00 0.00 1.65 13.12 3.89 0.00 0.00 0.00 46 E13a_E14a KnownJunction 0 3.70 5.85 8.28 16.22 0.00 5.79 10.29 1.77 24.10 6.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 4.14 0.00 0.00 0.00 0.00 47 ER14a ExonRegion 0 2.49 5.67 14.68 29.14 2.65 7.00 10.50 1.07 30.19 10.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.07 10.67 1.90 0.00 0.00 0.00 48 E14a_E15a KnownJunction 0 0.00 5.33 15.23 27.04 0.00 21.86 2.25 0.00 28.47 7.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.66 8.56 2.81 0.00 0.00 0.00 49 ER15a ExonRegion 0 2.69 10.90 21.50 37.49 3.26 5.79 10.01 0.00 31.13 17.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.85 18.40 6.44 0.00 0.00 0.00 50 E15_Da KnownBoundary 0 0.00 18.75 20.61 44.22 11.88 11.70 7.95 0.00 49.65 16.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.67 7.34 9.27 0.00 0.00 0.00 51 ER15b ExonRegion 0 9.98 21.57 42.69 51.29 10.55 11.08 16.91 3.00 44.64 21.64 1.21 3.06 2.96 2.22 5.82 5.17 3.17 7.08 14.02 8.87 2.53 1.08 4.78 52 ER15c ExonRegion 0 1.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00