Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BDH2 Gene 0 67.82 6.49 40.06 20.74 36.92 55.74 13.01 24.57 40.38 13.03 55.77 48.93 19.09 42.62 53.74 67.62 51.45 13.48 27.57 12.38 104.23 153.11 113.84 2 296424 Transcript 0 59.16 8.09 45.08 11.39 17.79 69.40 6.16 22.10 19.84 9.00 53.65 40.60 24.16 48.34 64.80 81.03 59.93 13.12 16.94 11.16 60.17 92.46 54.96 3 492366 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 432053 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 475058 Transcript 0 6.67 2.89 30.66 5.19 16.30 0.00 0.00 8.42 11.69 0.00 2.47 17.71 0.00 4.94 0.00 6.84 11.13 0.00 9.22 5.75 33.24 19.41 32.44 6 464039 Transcript 0 0.72 0.00 1.28 0.41 0.24 1.82 0.12 1.05 1.99 0.34 2.50 4.82 2.60 3.99 4.95 7.90 5.17 2.47 0.79 0.43 3.71 6.99 7.95 7 ER1a ExonRegion 1 57.28 13.28 7.24 5.11 21.07 99.77 5.38 5.29 5.29 2.76 46.39 4.06 0.00 25.58 40.07 56.93 37.34 2.94 16.62 10.31 34.09 18.49 30.38 8 E1_Ac KnownBoundary 1 85.20 12.37 3.61 0.00 36.59 160.19 18.42 0.00 1.48 0.00 57.44 0.00 0.00 25.84 52.29 52.98 44.13 2.11 20.80 9.52 29.84 21.43 29.36 9 E1_Ad KnownBoundary 0 80.76 12.37 22.62 11.32 25.81 154.06 8.44 12.32 16.12 7.55 44.17 0.00 0.00 39.32 22.00 76.13 42.73 4.68 9.60 9.59 42.07 13.96 33.72 10 ER1b ExonRegion 1 115.35 25.08 16.13 9.77 42.37 203.86 11.69 8.64 12.35 5.73 86.34 8.66 0.00 57.11 75.43 121.36 73.72 5.85 31.85 19.15 68.68 38.20 65.10 11 ER1c ExonRegion 1 152.04 26.44 26.75 13.63 62.43 253.37 27.80 12.68 14.41 7.45 107.60 8.66 0.00 99.34 92.84 143.65 98.48 8.93 34.51 20.57 111.29 70.15 138.51 12 ER1d ExonRegion 1 216.94 32.03 37.68 14.31 92.65 300.51 37.57 18.15 21.31 8.32 136.27 8.66 1.17 136.43 118.95 204.71 136.99 11.32 50.57 24.20 194.20 176.84 273.47 13 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 3.85 0.00 0.00 0.00 0.00 0.00 3.12 4.35 14 E1a_E3a KnownJunction 1 574.62 32.49 67.56 31.90 239.39 326.86 91.86 41.48 66.15 19.26 170.73 13.95 6.82 208.02 247.73 412.97 226.55 32.50 99.01 27.68 563.97 694.33 842.11 15 ER1e ExonRegion 1 342.20 32.54 47.35 20.77 147.49 301.40 57.78 27.31 43.87 14.77 150.15 10.39 5.07 191.58 187.30 326.46 175.21 24.17 74.16 25.53 396.84 441.46 553.15 16 ER2a ExonRegion 0 2.15 0.00 2.18 1.23 0.72 2.67 0.36 0.61 1.78 1.03 2.23 7.26 1.46 2.25 2.35 3.89 3.07 2.36 2.36 1.28 2.74 3.84 4.56 17 E2a_E3a KnownJunction 0 0.00 0.00 1.66 0.00 0.00 0.00 0.00 2.55 4.20 0.00 5.26 7.20 6.33 7.24 12.49 15.98 12.44 5.06 0.00 0.00 8.40 14.02 14.94 18 ER3a ExonRegion 1 129.61 10.21 41.66 19.21 53.60 75.19 21.03 20.65 39.71 12.80 80.99 29.55 9.28 44.58 56.29 127.38 110.94 26.25 39.09 13.39 208.32 212.22 213.51 19 E3a_E4a KnownJunction 1 13.56 6.18 49.76 16.55 20.97 15.05 8.79 19.43 30.27 11.36 118.29 50.42 6.49 30.78 36.34 57.25 170.27 7.42 32.57 15.72 192.56 48.25 30.47 20 ER4a ExonRegion 1 34.72 6.95 79.51 31.35 15.00 44.24 11.18 32.05 60.49 21.56 167.99 30.47 11.93 116.24 134.30 165.87 159.03 19.46 72.62 30.70 354.07 302.64 215.75 21 E4a_E5a KnownJunction 1 109.43 12.83 109.31 56.90 19.44 92.67 27.03 37.13 83.27 25.65 126.98 49.52 0.00 234.68 168.61 392.55 135.48 30.68 125.84 26.78 194.48 761.44 573.38 22 ER5a ExonRegion 0 49.55 7.17 79.67 35.25 66.04 180.49 30.18 31.50 66.02 23.34 159.06 84.00 37.18 124.76 125.11 210.29 105.66 42.17 79.60 30.40 213.26 359.37 350.91 23 E5a_E6a KnownJunction 0 41.64 9.74 77.91 29.20 112.99 318.62 43.63 40.17 83.68 33.71 150.83 80.13 31.98 57.27 108.78 115.18 111.36 25.41 49.22 29.21 199.17 223.26 131.20 24 ER6a ExonRegion 0 63.96 20.54 87.75 43.34 68.71 179.43 38.61 51.57 77.12 34.61 165.40 93.06 49.35 106.33 111.82 149.94 160.90 35.99 59.56 32.56 266.22 271.99 210.82 25 E6a_E7a KnownJunction 0 225.52 20.33 97.93 42.15 73.17 99.20 30.60 52.16 96.01 34.06 188.10 227.62 58.60 250.93 136.35 222.42 190.56 50.86 91.86 35.67 310.43 358.22 286.73 26 ER7a ExonRegion 0 156.59 13.53 102.49 41.78 70.97 103.74 24.46 64.32 93.56 36.57 166.04 187.37 58.89 170.56 149.34 194.84 179.60 48.53 87.36 26.79 295.77 313.04 264.78 27 E7_Da KnownBoundary 0 51.86 2.83 10.35 15.12 29.12 50.48 15.81 21.32 33.45 14.77 38.96 19.36 20.45 17.78 20.27 54.17 35.81 11.57 31.15 8.18 139.86 122.65 95.18 28 E7a_E7b KnownJunction 0 101.65 10.98 121.34 28.37 30.90 94.72 12.23 52.66 50.29 23.24 108.40 109.39 53.73 114.25 139.19 184.31 138.20 35.19 22.59 20.20 141.90 224.11 115.07 29 ER7b ExonRegion 0 67.28 2.56 11.59 16.77 29.02 26.78 15.25 13.93 31.20 6.98 32.73 38.72 15.42 19.38 11.10 45.84 32.69 7.43 15.83 11.07 100.40 101.73 90.33 30 E7_Db KnownBoundary 0 74.53 6.18 13.66 14.88 58.40 31.00 25.88 15.40 32.55 6.85 40.12 74.42 21.10 27.02 13.35 52.29 26.18 9.45 18.73 12.72 80.31 147.39 103.72 31 ER7c ExonRegion 1 73.37 4.75 19.73 17.29 42.31 38.57 13.50 15.29 39.73 6.66 26.85 55.40 21.50 16.06 19.92 34.42 23.39 7.24 15.40 7.83 57.91 113.32 92.34 32 E7_Dc KnownBoundary 1 123.73 15.06 7.39 15.95 37.95 39.47 4.02 16.39 45.40 7.06 11.32 49.67 6.49 21.07 4.45 11.62 0.00 4.10 17.41 12.21 8.65 104.16 43.88 33 E7c_E7b KnownJunction 0 6.67 2.89 30.66 5.19 16.30 0.00 0.00 8.42 11.69 0.00 2.47 17.71 0.00 4.94 0.00 6.84 11.13 0.00 9.22 5.75 33.24 19.41 32.44 34 ER7d ExonRegion 1 109.82 8.86 18.22 27.61 60.50 40.09 14.08 17.84 30.00 10.07 18.11 43.19 22.14 17.90 25.23 23.83 13.91 5.30 17.19 3.18 44.26 124.14 75.70 35 E7_Ab KnownBoundary 0 88.16 2.50 23.83 17.28 80.14 48.10 11.00 13.43 39.76 12.03 21.58 26.26 15.10 27.49 14.34 29.56 22.16 2.45 17.79 2.49 135.23 78.75 129.15 36 ER7e ExonRegion 0 155.46 14.29 129.40 41.65 51.86 117.14 21.92 70.61 90.83 34.34 115.31 100.61 37.23 82.95 114.28 151.24 137.82 31.26 44.99 20.77 249.97 290.05 197.43 37 E7d_E8a KnownJunction 0 272.64 26.90 117.94 40.59 89.13 135.09 18.28 83.22 83.33 33.34 148.67 143.90 55.84 158.16 226.96 222.85 173.73 31.75 86.21 27.10 361.95 349.64 334.37 38 E8_Aa NovelBoundary 0 9.71 0.00 6.86 1.53 22.92 8.23 0.00 0.00 2.63 2.58 6.48 6.00 8.28 2.47 0.00 8.37 0.00 0.00 4.14 3.26 2.59 10.90 8.62 39 ER8a ExonRegion 0 194.25 19.16 119.32 44.63 73.56 100.02 14.45 84.93 96.15 38.88 112.47 127.76 56.52 156.55 189.22 219.69 138.08 49.29 102.80 26.47 267.36 335.16 330.55 40 E8a_E9a KnownJunction 0 183.22 15.00 154.81 64.93 89.47 62.24 19.17 92.91 110.33 45.32 138.35 164.00 46.75 130.73 219.42 251.90 134.27 43.53 79.06 44.61 226.17 443.94 387.38 41 ER9a ExonRegion 0 98.09 11.37 155.99 63.98 86.80 95.81 26.52 86.07 114.91 42.45 144.28 113.50 28.09 120.32 203.84 191.21 123.41 29.11 52.58 34.77 295.53 414.87 288.58 42 E9a_E10a KnownJunction 0 111.13 12.37 131.28 54.77 61.71 126.12 35.99 85.76 108.71 39.46 151.67 69.77 41.39 88.47 184.56 134.41 139.88 34.03 28.71 21.86 249.70 345.17 185.66 43 I9_AR1 ActiveIntronRegion 0 0.00 0.00 0.00 1.36 0.00 3.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.33 11.61 0.00 0.00 0.00 0.00 0.00 0.00 0.69 5.87 44 ER10a ExonRegion 0 81.99 8.03 91.45 39.38 39.92 80.88 12.17 56.55 82.74 29.01 115.61 71.80 24.35 78.24 131.04 96.17 79.93 21.08 48.48 29.58 162.69 356.98 150.74 45 E10_Da KnownBoundary 0 63.49 5.72 76.76 26.44 45.59 46.11 12.63 50.69 58.39 22.19 41.69 24.31 12.99 33.20 44.01 23.24 8.23 6.84 26.07 5.56 21.00 185.54 42.08 46 ER10b ExonRegion 0 69.02 8.17 39.85 13.93 42.47 63.81 17.02 37.67 31.66 12.72 34.65 40.25 26.40 22.77 38.09 32.80 12.59 6.02 34.80 6.46 19.34 141.83 53.51 47 E10_Db KnownBoundary 0 10.08 0.00 17.95 1.56 7.30 23.40 5.61 15.69 2.81 1.61 6.48 11.70 5.84 2.24 5.07 10.85 0.00 2.32 4.05 5.82 9.08 15.80 10.41 48 E10_Dc KnownBoundary 0 38.90 0.00 13.10 5.39 0.00 11.24 0.00 6.33 20.28 1.32 4.32 11.70 0.00 0.00 9.64 6.58 4.49 0.00 0.00 3.07 2.72 41.58 22.28 49 ER10c ExonRegion 1 35.98 0.00 19.61 4.09 12.04 47.68 3.97 19.01 14.20 4.59 17.40 21.65 42.21 9.74 34.82 11.89 8.25 3.70 33.45 6.38 8.81 66.67 35.24 50 ER10d ExonRegion 1 18.54 0.00 6.65 0.68 1.40 13.71 0.88 8.35 3.94 1.01 6.17 8.35 18.76 5.18 15.13 1.84 4.24 1.23 11.60 2.99 4.51 34.77 19.44 51 IG2_AR2 ActiveIntergenicRegion 0 8.86 2.63 6.79 3.26 9.34 7.68 1.91 4.21 8.68 2.47 1.21 13.96 1.86 2.82 4.47 2.43 1.43 0.31 3.37 1.66 0.95 29.07 6.64