Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AIMP1 Gene 0 132.04 165.95 87.07 155.64 127.26 141.68 94.15 55.71 54.12 86.07 142.41 242.60 120.02 146.21 164.71 104.63 112.64 44.33 66.91 88.08 57.92 129.49 55.39 2 442366 Transcript 0 2.19 1.43 0.82 0.30 0.00 0.00 0.00 0.13 0.00 0.08 2.29 0.00 0.00 2.59 0.11 0.00 2.93 0.82 0.00 0.32 0.08 0.69 0.44 3 358008 Transcript 0 3.01 2.48 1.81 3.03 4.95 5.76 3.13 2.44 2.48 1.54 1.69 0.97 0.30 2.22 2.07 4.56 2.08 5.42 2.38 3.94 6.16 2.62 3.23 4 432345 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 1.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.39 0.00 5 394699 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 394701 Transcript 0 1.69 2.44 0.00 0.55 6.42 6.60 1.06 0.00 0.00 4.59 0.00 0.00 3.75 0.65 0.00 0.00 0.00 0.00 1.91 0.00 0.00 2.92 0.00 7 ER1a ExonRegion 0 2.19 1.43 0.82 0.30 0.00 0.00 0.00 0.13 0.00 0.08 2.29 0.00 0.00 2.59 0.11 0.00 2.93 0.82 0.00 0.32 0.08 0.69 0.44 8 E2_Aa NovelBoundary 0 16.37 21.31 18.63 30.23 0.00 0.00 2.16 11.17 26.45 9.11 7.84 31.06 0.00 0.00 10.01 15.12 3.65 9.95 0.00 6.01 3.15 3.06 4.35 9 ER2a ExonRegion 0 6.02 4.95 3.62 6.07 9.89 11.53 6.27 4.87 4.95 3.09 3.37 1.94 0.61 4.43 4.14 9.12 4.16 10.84 4.76 7.88 12.32 5.24 6.47 10 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER3a ExonRegion 0 0.00 0.00 0.20 0.00 0.22 0.31 0.00 0.00 0.00 0.10 0.00 0.00 0.00 0.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER3b ExonRegion 1 182.38 224.04 45.74 55.23 108.33 167.50 108.36 18.69 17.02 39.01 113.35 6.15 9.07 190.56 179.46 112.94 107.02 31.92 35.04 77.69 85.65 53.38 79.48 13 E3_Da NovelBoundary 1 3.56 25.26 5.82 8.32 16.21 44.69 24.82 4.89 1.50 1.32 24.69 0.00 0.00 106.48 23.98 85.36 44.69 18.07 32.00 41.10 27.24 24.00 53.61 14 E3a_E4a KnownJunction 1 934.76 910.69 145.44 170.57 459.25 725.72 404.97 65.92 53.44 117.14 487.70 87.93 79.05 734.48 674.33 462.70 454.51 115.41 114.64 236.37 288.38 170.66 327.45 15 I3 Intron 0 11.35 10.59 7.07 12.57 14.50 11.09 11.16 6.68 10.48 7.99 22.58 57.41 36.24 28.61 14.08 14.98 16.28 5.28 8.19 18.35 5.86 22.27 6.90 16 I3_AR1 ActiveIntronRegion 1 4.68 2.99 6.72 8.97 9.36 9.12 4.39 5.69 7.12 5.03 33.10 21.85 17.37 46.10 13.67 32.29 29.16 17.76 22.29 32.91 24.77 13.43 21.10 17 I3_AR2 ActiveIntronRegion 1 12.45 10.65 4.97 5.31 16.76 6.93 9.61 7.26 7.62 4.49 35.94 60.83 32.50 44.65 13.27 21.17 25.74 6.64 8.25 24.96 11.29 17.23 11.18 18 I3_AR3 ActiveIntronRegion 1 10.96 15.54 6.97 10.98 13.04 13.55 13.97 11.10 16.83 11.45 50.95 77.58 41.49 62.51 16.73 34.91 40.76 17.29 17.20 32.08 16.87 29.38 19.93 19 I3_SR2 SilentIntronRegion 1 9.59 16.63 9.77 17.40 21.71 18.72 17.51 10.12 18.89 13.76 36.28 101.31 61.19 60.62 15.60 28.82 20.18 10.23 8.29 35.79 8.13 35.03 13.78 20 I3_AR4 ActiveIntronRegion 0 26.60 23.20 14.86 22.02 32.64 24.29 23.45 14.98 23.34 17.44 44.53 125.76 83.40 50.44 31.57 25.99 31.46 7.71 15.66 32.42 7.94 51.92 10.36 21 I3_SR3 SilentIntronRegion 1 41.33 11.91 9.52 10.50 19.24 22.76 16.36 0.00 5.99 4.41 37.77 70.49 31.27 56.68 40.69 23.01 34.45 6.02 10.41 30.52 15.85 21.80 9.60 22 ER4a ExonRegion 0 296.11 208.11 124.64 146.75 138.46 158.02 100.04 50.71 74.93 100.09 367.01 149.69 130.38 225.07 221.66 172.03 263.68 79.55 70.29 149.08 174.37 119.46 95.11 23 E4a_E5a KnownJunction 0 363.55 167.21 223.65 277.89 130.22 123.28 68.72 94.47 104.31 157.28 605.21 212.77 277.09 650.78 550.22 263.01 438.99 131.57 183.63 260.08 228.27 269.55 138.46 24 ER5a ExonRegion 0 237.18 270.84 168.40 264.23 250.82 237.07 142.66 86.71 100.76 131.98 412.79 429.95 400.92 442.74 496.60 314.52 293.06 119.28 95.73 231.15 95.82 204.81 187.40 25 E5a_E6a KnownJunction 0 241.45 464.52 207.53 284.95 622.33 769.10 445.20 96.03 122.02 159.26 445.69 538.53 468.64 275.47 480.75 212.85 422.35 81.70 90.45 213.68 64.00 235.75 79.05 26 ER6a ExonRegion 0 338.98 448.20 187.77 262.45 227.22 265.58 202.74 103.18 102.65 154.00 406.97 744.05 504.32 381.83 518.94 267.12 356.89 72.69 127.59 192.29 79.66 287.34 102.99 27 E6a_E7a KnownJunction 1 499.72 370.20 206.20 255.41 209.08 200.68 152.36 102.03 83.01 191.69 486.44 1025.58 815.69 583.73 748.13 328.89 423.94 57.95 203.86 230.61 146.23 363.42 126.17 28 ER7a ExonRegion 0 403.41 301.90 196.58 228.58 158.71 177.04 154.41 104.00 90.23 168.17 489.52 955.70 646.29 515.87 621.53 327.36 519.00 89.48 175.29 204.01 154.64 332.89 139.95 29 E7_Da KnownBoundary 0 467.05 348.16 232.61 271.53 186.50 152.87 217.81 128.56 116.67 169.85 448.11 879.59 684.70 542.94 627.36 347.69 556.24 118.52 165.46 198.65 170.69 339.05 146.40 30 E7a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.39 0.00 31 ER7b ExonRegion 0 407.38 389.90 233.52 297.59 254.85 200.39 166.32 130.50 121.64 193.17 495.46 912.52 517.67 512.57 575.59 430.78 455.22 132.34 192.62 193.45 194.88 313.49 143.76 32 E7_Ab KnownBoundary 0 399.18 488.93 191.71 276.82 382.43 218.91 138.49 116.65 115.88 167.65 449.43 804.11 380.33 584.20 767.05 373.06 391.68 117.15 173.75 190.15 224.81 320.07 181.91 33 ER7c ExonRegion 0 305.68 419.57 179.43 236.24 250.10 172.92 140.59 103.01 87.17 155.59 420.55 839.27 320.62 531.02 570.62 360.32 368.30 130.84 144.97 189.13 192.05 287.17 175.01 34 E7b_E8a KnownJunction 0 359.47 464.39 185.92 251.08 223.51 171.21 190.92 99.19 71.41 158.16 370.30 940.51 326.93 583.32 485.07 353.50 319.96 118.85 176.19 196.99 193.42 275.00 191.98 35 ER8a ExonRegion 0 241.45 291.61 184.31 234.27 243.81 198.79 170.77 98.12 84.58 136.52 407.97 583.07 178.00 474.81 503.27 339.51 290.56 117.57 144.49 171.71 186.55 243.76 141.64 36 E8a_E9a KnownJunction 1 226.78 275.08 183.67 263.14 276.32 196.14 171.13 93.98 82.72 119.16 343.77 413.38 96.26 371.83 430.93 204.31 218.79 88.75 135.82 159.79 161.42 192.33 117.72 37 ER9a ExonRegion 0 105.09 175.01 85.20 178.44 148.47 177.65 112.45 64.56 62.66 108.57 101.97 230.44 68.04 110.40 119.50 67.76 70.17 31.53 59.73 84.43 39.17 172.02 43.38 38 E9_Da KnownBoundary 1 226.63 212.79 51.62 193.05 178.86 163.60 133.46 51.38 41.81 96.22 10.63 166.55 108.11 39.67 36.71 7.95 0.00 12.52 38.31 39.25 8.15 75.07 11.01 39 ER9b ExonRegion 1 89.61 120.00 70.65 186.22 109.61 141.81 82.12 53.05 48.43 75.57 27.66 113.39 57.05 24.73 32.12 21.53 22.19 29.89 69.34 62.84 24.10 73.92 29.23 40 ER9c ExonRegion 0 1.69 2.44 0.00 0.55 6.42 6.60 1.06 0.00 0.00 4.59 0.00 0.00 3.75 0.65 0.00 0.00 0.00 0.00 1.91 0.00 0.00 2.92 0.00