Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SEC24D Gene 0 84.53 96.64 47.99 65.11 88.74 124.99 76.25 84.58 49.60 66.21 195.86 488.50 462.17 242.53 136.14 227.02 207.02 96.15 21.46 136.41 427.18 432.26 321.35 2 429811 Transcript 0 1.25 2.57 0.00 0.21 0.63 2.14 3.17 0.92 1.03 1.05 2.91 3.37 2.92 1.62 1.28 2.71 1.20 1.29 0.37 3.10 4.48 4.55 4.49 3 280551 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 379735 Transcript 1 3.44 18.93 9.56 8.86 4.35 16.97 12.93 23.31 13.17 16.98 72.66 118.43 289.78 126.15 48.00 64.40 87.77 47.00 12.16 60.00 228.39 106.42 124.04 5 419654 Transcript 0 0.00 0.00 0.44 0.00 2.60 0.00 4.45 0.00 0.21 1.31 0.00 2.41 17.72 1.13 0.00 4.71 0.18 0.10 0.00 3.61 1.78 8.22 5.47 6 IG45_AR2 ActiveIntergenicRegion 0 0.00 2.92 0.56 0.00 2.01 3.90 4.43 0.00 1.79 0.00 2.60 13.39 3.08 5.56 1.13 2.69 0.00 1.91 0.00 4.95 6.37 1.17 1.10 7 ER1a ExonRegion 0 3.98 3.53 0.00 0.00 0.00 8.58 1.32 0.00 1.42 1.89 7.90 0.00 2.21 5.78 1.79 9.44 3.30 2.34 0.00 3.57 13.74 8.64 7.69 8 E1_Ab KnownBoundary 0 10.45 6.38 0.00 0.00 0.00 29.59 2.25 0.00 1.74 0.00 15.64 0.00 6.82 14.19 5.19 20.51 13.18 13.76 4.24 6.52 34.35 17.45 27.66 9 E1_Ac KnownBoundary 0 17.04 6.25 0.00 1.73 0.00 21.81 8.83 2.14 1.79 6.61 24.06 5.55 12.66 9.48 10.38 23.93 17.39 4.31 0.00 6.14 77.47 17.27 20.23 10 ER1b ExonRegion 0 13.48 7.76 0.86 1.87 0.10 25.61 5.79 0.00 2.88 5.99 30.43 0.00 9.21 16.54 8.92 28.51 10.88 6.84 0.35 14.03 61.95 35.81 24.69 11 E1_Ad KnownBoundary 0 41.49 23.75 3.16 10.16 7.22 56.22 21.37 4.39 2.60 7.98 44.17 23.41 0.00 71.46 19.66 71.01 46.47 27.53 4.24 39.88 111.57 139.12 136.92 12 ER1c ExonRegion 1 32.59 15.73 2.45 5.63 4.46 40.47 18.09 1.73 4.20 11.47 50.38 2.89 4.69 58.36 21.86 66.77 30.15 20.33 4.46 29.79 128.11 98.90 110.03 13 ER1d ExonRegion 0 24.89 19.43 4.36 6.98 8.87 33.30 19.21 8.37 9.39 15.19 55.22 21.87 23.06 56.95 20.51 64.29 65.63 42.33 5.53 35.47 199.83 96.02 146.47 14 E1a_E2a KnownJunction 1 0.00 15.59 7.92 15.95 4.07 5.79 0.00 29.37 20.25 35.08 167.52 102.78 81.00 94.41 19.16 168.67 147.83 67.32 4.71 63.73 460.80 158.78 213.24 15 ER2a ExonRegion 0 8.45 19.31 13.19 24.20 15.20 49.18 24.15 49.69 39.03 47.66 180.76 236.76 306.65 201.95 75.10 236.20 182.30 126.29 9.46 133.60 501.93 361.86 377.98 16 E2a_E3a KnownJunction 0 18.23 32.30 27.50 24.67 26.40 112.38 66.51 49.70 45.46 35.94 183.10 229.72 253.88 255.70 159.84 176.36 212.15 103.88 0.00 145.67 678.13 392.75 255.15 17 ER3a ExonRegion 0 22.24 44.99 20.76 20.87 30.05 82.20 33.86 55.88 41.02 48.43 186.47 344.49 454.93 237.23 76.48 210.45 228.96 111.39 18.89 129.36 585.85 320.48 280.38 18 E3a_E4a KnownJunction 0 24.52 61.83 35.10 29.23 18.76 72.91 17.58 69.62 51.45 53.67 147.67 395.53 606.13 322.92 116.45 298.38 233.66 181.03 28.14 187.60 612.89 434.82 405.39 19 ER4a ExonRegion 0 29.60 34.75 39.66 32.33 16.02 56.17 26.50 77.28 66.09 67.27 293.15 496.58 764.19 407.15 133.81 366.33 357.74 189.14 27.47 187.25 848.47 534.78 496.37 20 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.18 21 E4a_E6a KnownJunction 0 2.74 10.92 26.55 33.13 16.13 15.73 23.76 58.28 44.82 66.35 233.80 502.06 930.78 308.08 92.22 362.21 272.18 157.11 58.35 169.70 851.91 374.50 412.99 22 ER5a ExonRegion 0 1.01 6.77 0.00 0.83 2.50 0.00 11.36 3.68 1.07 2.33 1.70 13.47 9.47 0.71 3.34 1.42 1.51 1.21 1.49 5.57 4.18 6.62 6.09 23 E5_Da NovelBoundary 0 6.67 6.12 16.50 4.43 3.23 0.00 2.25 2.55 4.31 4.08 0.00 50.42 19.48 0.00 4.82 8.20 0.00 0.00 0.00 9.01 0.00 8.27 0.00 24 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 2.05 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 3.26 0.00 2.94 0.00 25 I5_SR1 SilentIntronRegion 0 27.36 8.90 10.02 13.98 5.70 0.98 4.01 4.93 7.84 2.04 7.90 38.97 7.48 0.00 4.63 6.89 4.35 0.00 0.00 4.35 3.00 4.38 4.09 26 I5_AR2 ActiveIntronRegion 0 19.48 16.98 7.90 9.19 15.96 1.72 14.14 8.85 4.24 1.73 2.08 28.89 19.61 0.78 10.18 4.43 2.18 1.29 0.00 5.44 2.47 2.49 4.59 27 ER6a ExonRegion 0 38.29 47.59 31.79 31.83 24.81 81.83 43.25 64.12 53.01 62.66 231.74 468.81 859.52 365.72 101.24 293.11 299.84 163.23 29.67 168.82 791.87 407.80 411.18 28 E6a_E7a KnownJunction 1 3.70 20.06 6.56 8.86 0.00 10.11 9.32 20.70 10.59 10.15 57.38 82.08 220.76 97.59 44.50 49.30 68.26 33.49 13.18 51.39 174.71 74.28 93.90 29 E6a_E7b KnownJunction 1 6.08 33.48 8.34 23.87 26.32 46.68 17.80 46.70 22.40 36.94 115.61 326.36 760.18 201.01 68.36 117.23 167.46 110.10 18.82 102.59 432.07 233.61 268.30 30 ER7a ExonRegion 1 3.17 17.79 12.56 8.86 8.70 23.84 16.55 25.93 15.75 23.80 87.95 154.78 358.79 154.70 51.50 79.50 107.28 60.51 11.15 68.62 282.07 138.55 154.17 31 ER7b ExonRegion 0 14.52 27.29 23.34 23.38 29.22 83.96 39.63 52.03 36.18 60.45 194.84 301.46 518.53 293.53 83.38 198.59 206.73 113.29 20.47 128.23 622.12 282.69 274.73 32 E7a_E8a KnownJunction 0 19.26 42.03 10.64 52.11 43.63 64.85 47.43 76.56 43.26 61.92 204.68 358.17 441.69 288.25 97.90 206.44 263.95 122.87 30.40 174.75 604.37 286.82 332.49 33 ER8a ExonRegion 0 32.26 62.79 23.33 47.25 35.33 87.69 55.16 92.27 52.44 74.67 260.61 403.76 518.50 372.87 129.21 326.08 272.94 153.30 36.12 207.86 740.53 457.52 496.58 34 E8a_E9a KnownJunction 0 45.12 58.74 28.21 54.84 35.74 144.01 61.83 73.19 62.76 77.01 317.55 359.22 512.79 374.19 120.90 317.44 212.72 134.52 46.21 167.21 765.85 400.71 407.52 35 ER9a ExonRegion 0 26.44 77.26 25.72 44.50 51.17 130.01 71.31 58.61 52.77 69.49 250.76 397.90 481.46 348.51 120.61 259.71 267.84 119.02 31.70 181.03 748.09 439.74 415.19 36 E9a_E10a KnownJunction 0 24.45 92.55 27.26 74.75 74.70 174.39 89.78 70.73 67.42 78.89 273.12 587.74 683.40 418.33 162.31 287.62 247.59 117.44 29.65 249.85 780.68 509.52 604.11 37 ER10a ExonRegion 0 37.08 60.96 39.49 69.44 59.44 121.16 80.06 74.67 55.86 69.32 253.21 557.47 598.23 335.39 119.03 336.04 247.80 136.57 21.79 189.74 588.82 559.25 495.07 38 E10a_E11a KnownJunction 1 73.42 99.39 63.95 61.13 94.74 142.99 84.35 94.10 55.99 80.08 313.03 618.05 883.06 304.96 64.53 300.69 222.53 119.05 7.44 178.33 461.42 506.22 390.88 39 ER11a ExonRegion 0 45.80 85.94 44.93 55.09 75.27 151.02 95.35 87.09 56.55 59.66 267.44 666.63 633.68 251.44 99.84 262.83 231.15 109.19 18.29 152.13 308.29 492.77 364.62 40 E11a_E12a KnownJunction 0 88.24 145.83 39.97 67.96 87.01 228.11 130.63 109.79 53.65 76.93 404.94 794.51 650.93 329.10 180.98 444.58 335.86 132.69 30.97 153.59 356.58 918.20 634.76 41 ER12a ExonRegion 0 61.67 95.32 28.61 45.57 82.63 136.29 97.54 74.17 51.03 55.78 233.59 755.16 646.59 255.90 102.73 249.63 240.15 65.11 14.22 138.76 247.17 492.34 310.65 42 E12a_E13a KnownJunction 0 75.87 116.30 38.05 65.93 93.12 105.85 118.36 97.26 50.84 61.06 268.23 769.00 738.75 247.46 122.38 193.54 277.51 50.24 22.02 154.36 373.38 535.73 334.71 43 ER13a ExonRegion 0 46.28 88.02 29.39 55.99 76.15 145.42 103.43 81.28 54.60 74.18 242.28 803.79 572.84 276.23 98.84 231.70 268.03 84.13 28.97 133.44 359.58 512.96 326.56 44 E13a_E14a KnownJunction 0 70.09 71.11 38.61 53.97 135.06 131.17 117.65 81.33 43.49 86.39 249.12 798.41 505.00 407.09 189.38 243.18 267.88 101.48 48.66 151.42 479.58 616.32 494.76 45 ER14a ExonRegion 0 59.24 83.55 38.10 63.84 104.33 132.09 83.66 84.03 50.69 76.48 236.70 710.91 390.72 291.15 110.00 243.75 267.90 98.17 34.06 141.83 514.68 483.29 363.21 46 E14a_E15a KnownJunction 0 41.04 96.96 51.42 63.59 68.59 170.87 97.42 65.10 56.19 67.24 233.11 772.90 393.81 289.78 101.86 234.13 190.56 127.01 29.55 147.39 491.13 418.47 347.09 47 ER15a ExonRegion 0 61.92 102.86 41.45 55.85 83.73 175.04 101.35 59.27 36.98 64.11 210.55 567.75 339.21 305.85 112.78 299.96 230.19 124.54 25.86 129.50 571.95 414.69 402.02 48 E15a_E16a KnownJunction 0 86.09 142.34 51.62 65.69 144.74 203.35 167.51 88.60 44.50 94.61 271.44 637.56 441.37 435.93 166.64 329.91 275.64 112.01 54.68 216.17 649.09 650.36 638.09 49 ER16a ExonRegion 0 59.27 79.14 41.41 57.63 78.54 106.72 65.37 58.12 41.76 64.41 214.19 447.38 323.04 268.21 112.35 236.45 256.97 96.66 25.22 139.99 517.67 382.50 359.01 50 E16a_E17a KnownJunction 0 106.54 148.33 50.94 83.21 122.92 191.14 108.11 83.87 72.57 93.02 301.60 618.05 499.80 362.71 115.58 294.28 476.11 120.50 44.05 205.05 640.20 443.27 463.35 51 ER17a ExonRegion 0 100.70 137.44 42.17 66.02 104.49 188.90 95.90 83.70 66.94 76.48 271.34 533.91 511.94 373.75 154.27 300.58 333.49 113.97 30.77 149.94 566.78 473.15 415.91 52 E17a_E18a KnownJunction 0 68.53 118.79 56.47 72.95 111.38 196.36 123.57 90.12 73.32 79.57 251.48 423.29 493.64 304.61 165.03 252.50 324.73 106.99 16.75 137.55 569.46 465.13 280.93 53 ER18a ExonRegion 0 74.73 109.35 45.27 79.53 98.53 157.91 71.78 86.66 63.32 73.11 214.29 564.34 603.02 280.72 149.08 300.61 296.97 139.05 23.65 173.59 555.59 477.90 434.60 54 E18a_E19a KnownJunction 0 114.91 135.77 68.27 96.09 97.37 175.13 83.47 117.47 72.40 95.60 295.02 647.76 498.34 428.69 219.54 467.66 240.77 196.03 46.78 170.28 616.97 792.85 593.79 55 ER19a ExonRegion 0 128.86 191.60 59.85 91.00 128.07 189.18 105.07 108.10 56.26 72.64 305.37 621.79 594.76 314.61 197.29 337.22 319.88 159.60 35.50 185.32 691.00 558.22 455.88 56 E19a_E20a KnownJunction 0 154.99 252.72 73.27 130.62 251.44 431.46 162.47 151.85 62.07 82.47 340.24 939.31 820.08 381.48 209.28 398.70 379.71 180.90 34.26 141.38 716.99 653.73 579.62 57 ER20a ExonRegion 0 130.51 146.40 88.34 124.35 177.59 248.55 114.19 133.89 68.00 85.80 285.06 792.80 850.98 349.80 257.97 492.72 288.12 204.45 50.24 209.67 631.32 699.29 671.85 58 E20a_E21a KnownJunction 0 137.28 109.72 106.03 127.02 150.08 261.10 100.78 154.27 89.06 108.84 305.24 750.24 740.70 368.48 350.46 409.81 418.79 169.38 43.20 244.55 669.23 732.90 622.72 59 I20_SR1 SilentIntronRegion 0 19.47 11.28 2.93 8.79 9.05 2.72 9.26 4.88 1.48 2.52 1.31 16.02 18.51 2.64 4.83 3.55 5.36 1.62 0.00 4.89 3.88 8.10 9.53 60 ER21a ExonRegion 0 133.01 173.72 94.08 109.88 148.22 217.41 102.36 118.97 78.36 96.24 258.40 571.95 680.91 307.91 242.13 354.59 293.60 150.63 32.24 188.45 648.06 549.24 491.87 61 E21a_E22a KnownJunction 0 121.87 165.37 62.24 58.17 152.97 209.14 72.03 92.21 44.33 86.52 199.10 577.84 481.30 289.54 200.75 229.68 178.59 112.38 29.08 161.45 489.28 305.49 291.77 62 ER22a ExonRegion 0 145.68 132.88 54.91 75.41 116.27 193.44 89.73 98.53 56.09 63.87 204.39 449.75 433.93 273.09 206.14 252.91 200.48 99.58 28.50 164.34 366.44 393.72 357.37 63 E22_Da KnownBoundary 0 0.00 0.00 1.30 2.06 3.99 0.00 11.26 2.14 4.34 4.30 0.00 6.30 32.95 2.47 0.00 12.13 0.00 0.00 0.00 6.39 8.22 15.25 8.28 64 E22a_E23a KnownJunction 0 170.70 134.06 68.06 78.68 98.73 167.01 113.32 98.66 50.20 70.49 232.74 457.20 415.56 266.53 167.01 211.23 175.60 75.03 45.74 168.68 239.20 431.76 320.97 65 ER22b ExonRegion 0 0.00 0.00 0.44 0.00 2.60 0.00 4.45 0.00 0.21 1.31 0.00 2.41 17.72 1.13 0.00 4.71 0.18 0.10 0.00 3.61 1.78 8.22 5.47 66 E22_Db NovelBoundary 0 3.48 0.00 3.37 7.23 14.43 0.00 31.71 0.00 1.79 0.00 2.63 29.86 28.08 2.12 0.00 8.46 4.77 0.00 0.00 3.20 0.00 15.74 0.00 67 ER23a ExonRegion 0 188.11 135.59 56.90 84.45 162.60 167.69 128.16 107.59 59.55 71.43 210.88 455.03 379.84 215.88 209.99 215.58 185.62 52.00 36.95 145.79 226.20 434.11 302.34 68 E23a_E24a KnownJunction 0 358.88 220.29 57.18 116.24 147.62 167.23 103.52 107.29 69.15 64.58 172.10 426.74 403.38 199.07 254.53 231.90 248.06 40.58 43.77 135.57 235.12 464.88 264.63 69 I23 Intron 0 8.42 4.56 4.76 6.61 13.16 7.56 14.65 10.43 6.93 12.73 11.19 68.28 100.79 14.83 12.17 11.18 11.70 7.98 1.84 12.47 18.01 53.05 21.67 70 I23_AR1 ActiveIntronRegion 0 25.52 2.97 0.00 2.20 5.83 4.90 10.75 1.16 5.24 0.67 8.16 62.81 88.76 15.49 9.79 14.99 12.81 1.41 2.42 11.27 9.80 61.35 12.05 71 I23_AR2 ActiveIntronRegion 0 6.59 4.88 5.30 6.50 15.85 8.45 16.95 11.42 6.97 15.43 10.72 71.26 108.58 14.54 11.59 10.73 10.07 6.94 1.63 12.97 15.68 55.94 21.65 72 I23 Intron 0 27.32 21.74 3.64 15.64 18.19 12.64 19.53 15.66 10.73 11.94 16.69 54.83 62.96 19.52 14.17 24.84 14.82 12.79 1.69 12.40 52.88 63.60 38.28 73 I23_AR2 ActiveIntronRegion 0 14.75 18.10 1.39 4.63 18.28 11.43 16.55 10.83 4.69 8.37 7.99 34.78 52.22 12.24 11.02 6.54 8.80 13.92 0.64 8.51 59.79 65.35 33.67 74 I23_SR3 SilentIntronRegion 0 54.16 66.47 1.46 13.53 24.86 7.06 18.77 24.44 14.18 17.42 22.80 87.92 84.34 21.88 16.34 28.60 19.43 13.92 2.40 17.54 73.48 124.77 40.60 75 I23_AR4 ActiveIntronRegion 0 42.82 24.72 6.21 26.11 25.00 17.55 25.23 22.12 10.22 15.09 21.03 70.21 95.76 23.64 22.82 34.33 16.85 14.87 1.44 15.06 51.14 71.33 44.79 76 I23_AR5 ActiveIntronRegion 0 45.85 20.42 4.03 18.58 28.54 19.36 25.03 16.42 9.08 7.50 9.81 38.20 67.95 17.76 14.82 21.58 7.39 6.04 0.99 3.63 33.75 36.82 28.97 77 E24_Aa NovelBoundary 0 108.32 18.81 3.05 17.98 29.71 18.68 12.90 2.14 6.13 6.26 9.69 37.96 62.66 6.65 13.85 7.52 4.39 4.60 0.00 6.07 25.58 38.52 36.36 78 ER24a ExonRegion 1 180.04 158.36 90.48 115.85 168.05 136.50 109.70 136.39 53.36 85.95 123.35 567.05 303.87 122.40 190.82 103.12 87.17 21.09 8.73 99.53 80.14 506.05 133.98 79 ER24b ExonRegion 0 0.00 0.00 1.23 1.36 0.00 0.00 3.97 1.73 0.00 1.15 0.00 0.00 14.07 1.62 0.00 0.00 0.00 0.00 0.00 0.00 2.20 0.00 0.00 80 IG44 Intergenic 0 8.30 17.16 12.35 23.00 22.90 20.25 19.71 13.52 10.89 14.51 10.91 23.05 14.57 9.86 12.73 6.22 8.06 5.21 6.07 11.57 3.27 11.44 5.59 81 IG44_AR6 ActiveIntergenicRegion 0 14.29 27.97 13.49 25.65 22.95 12.21 12.80 15.55 10.67 10.97 5.65 17.62 15.35 4.56 10.68 4.52 4.98 2.04 4.02 13.29 2.28 12.04 2.28 82 IG44_SR4 SilentIntergenicRegion 0 6.63 12.90 13.34 14.63 26.61 32.64 25.48 9.87 10.36 9.63 5.80 15.70 10.44 8.42 10.18 3.39 7.89 2.66 4.77 9.57 2.82 9.42 6.50 83 IG44_AR5 ActiveIntergenicRegion 0 5.16 15.03 17.49 25.58 28.43 30.44 23.40 11.41 14.65 18.47 9.06 31.99 19.13 6.25 10.23 4.00 4.87 3.22 3.37 13.02 1.15 7.71 4.75 84 IG44_SR3 SilentIntergenicRegion 0 4.42 15.08 14.51 26.64 28.10 32.63 22.69 11.31 14.93 12.49 11.03 24.76 12.73 11.53 5.62 12.80 9.77 14.06 11.65 10.36 11.06 6.91 9.46 85 IG44_AR4 ActiveIntergenicRegion 0 7.20 22.86 13.78 31.86 34.93 28.41 31.23 11.51 13.32 15.82 7.26 23.42 9.50 13.29 11.05 6.87 9.33 11.72 13.71 11.04 8.50 8.29 12.73 86 IG44_SR2 SilentIntergenicRegion 0 4.70 1.08 6.01 8.01 2.13 10.63 4.63 4.75 5.40 3.21 3.35 14.54 1.47 5.94 4.53 2.55 5.67 1.39 3.88 4.09 0.72 8.66 2.48 87 IG44_AR3 ActiveIntergenicRegion 0 7.28 16.25 12.43 23.02 27.22 24.01 29.63 12.06 10.55 11.60 9.43 16.81 7.71 11.52 9.40 7.00 7.50 9.04 9.00 12.07 2.12 6.58 7.36 88 IG44_AR2 ActiveIntergenicRegion 0 6.35 18.77 12.91 24.11 6.38 31.03 24.65 12.90 16.06 10.85 4.61 30.64 7.22 7.87 0.00 0.00 9.90 0.00 3.19 2.29 2.20 4.97 0.00 89 IG44_SR1 SilentIntergenicRegion 0 4.55 31.24 13.18 38.05 11.76 16.80 25.20 19.66 21.48 16.96 3.83 28.32 10.99 9.32 11.22 1.46 4.65 1.76 12.95 10.46 3.07 12.40 2.36 90 IG44_AR1 ActiveIntergenicRegion 0 43.88 70.83 55.33 111.69 90.61 77.62 68.18 72.84 47.53 74.87 69.73 100.44 64.65 49.29 81.25 28.76 42.95 14.99 22.11 47.52 9.06 70.21 16.48