Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RG9MTD2 Gene 0 12.26 22.27 9.42 38.85 18.28 17.41 11.06 10.84 13.47 26.68 16.46 51.78 31.25 33.12 23.30 16.78 21.14 5.15 8.35 9.96 2.61 14.42 7.26 2 455368 Transcript 0 0.79 2.34 0.64 1.70 2.83 1.22 2.98 2.01 0.00 2.73 6.73 2.93 6.33 6.23 0.00 2.18 6.80 0.00 0.10 0.00 2.03 1.56 1.62 3 394877 Transcript 0 0.00 0.00 0.00 2.35 0.00 0.00 0.83 0.11 1.68 0.50 1.34 9.60 0.00 3.28 0.00 5.47 2.01 0.00 0.00 0.00 0.00 0.52 0.00 4 394876 Transcript 0 1.11 0.22 0.19 0.21 0.00 0.39 0.00 0.27 0.19 0.21 1.02 0.03 0.00 1.38 1.29 1.54 0.71 1.46 0.00 0.23 0.49 0.88 0.93 5 273962 Transcript 0 1.79 3.45 1.08 4.65 0.91 2.49 2.01 1.31 2.19 3.02 1.15 1.05 1.38 3.74 1.11 1.01 1.12 1.80 2.43 2.34 1.31 0.88 0.25 6 ER1a ExonRegion 0 1.59 1.53 0.00 0.00 2.01 0.00 0.00 0.00 0.00 0.86 4.35 0.00 0.00 7.51 0.00 0.00 5.36 0.00 0.20 0.00 1.65 0.00 0.00 7 ER1b ExonRegion 0 11.17 14.06 4.31 10.54 13.12 25.44 16.12 1.30 4.80 5.52 20.82 7.20 5.05 34.81 14.48 22.15 19.81 11.26 9.34 9.39 7.71 15.71 37.24 8 E1a_E3a KnownJunction 0 0.00 3.16 1.27 3.40 3.65 2.44 5.96 4.03 0.00 4.59 9.11 5.85 12.66 4.94 0.00 4.36 8.23 0.00 0.00 0.00 2.41 3.12 3.24 9 E1a_E3b KnownJunction 0 0.00 0.00 0.00 2.83 0.00 0.00 0.00 0.00 2.89 0.99 2.68 19.21 0.00 4.94 0.00 10.94 4.02 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1c ExonRegion 0 2.21 0.43 0.39 0.43 0.00 0.78 0.00 0.55 0.39 0.42 2.05 0.05 0.00 2.77 2.59 3.08 1.42 2.91 0.00 0.45 0.98 1.76 1.86 11 E1b_E2a NovelJunction 0 0.00 0.00 0.00 12.99 0.00 10.90 4.24 2.09 1.71 0.00 0.00 0.00 0.00 0.00 0.00 12.30 13.46 6.63 0.00 3.07 0.00 0.00 0.00 12 E1b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2a ExonRegion 0 3.58 6.89 2.17 9.29 1.81 4.97 4.03 2.62 4.37 6.04 2.29 2.10 2.76 5.19 2.23 2.01 2.24 3.59 4.86 4.69 2.61 1.77 0.50 14 E2_Da NovelBoundary 0 0.00 6.64 16.20 54.80 3.23 0.00 10.20 5.63 9.14 7.49 2.16 5.70 0.00 2.47 6.30 8.72 0.00 1.99 0.00 11.57 0.00 0.00 4.35 15 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 I2_AR1 ActiveIntronRegion 0 6.61 11.01 7.22 22.83 5.57 3.82 4.69 6.43 8.04 10.67 3.22 10.55 0.80 6.46 1.71 4.33 2.06 6.12 5.97 3.99 2.75 1.30 2.45 17 E3_Ab NovelBoundary 0 11.34 5.53 1.12 11.69 3.14 15.05 9.45 4.31 7.32 12.46 8.27 26.41 0.00 7.00 4.45 6.92 30.29 3.65 3.58 5.94 13.22 8.70 4.27 18 ER3a ExonRegion 0 1.41 3.39 2.86 2.73 2.68 9.17 4.19 4.90 1.96 8.51 10.47 23.45 12.12 8.93 2.90 11.15 28.06 0.00 0.00 3.01 11.02 4.17 1.71 19 ER3b ExonRegion 0 5.81 17.60 8.97 25.55 21.19 28.01 10.16 11.61 18.41 26.04 34.25 55.71 53.36 59.14 21.03 38.80 46.68 10.39 15.31 20.05 7.47 18.77 22.62 20 E3a_E4a KnownJunction 1 11.11 33.74 17.68 50.71 30.14 78.82 25.88 19.14 25.64 30.84 34.54 99.48 154.21 48.80 33.13 56.99 26.74 9.00 4.80 11.82 7.85 5.45 19.89 21 ER4a ExonRegion 0 17.88 25.88 13.07 43.50 21.55 33.93 16.08 22.44 21.16 42.85 41.75 117.24 70.81 72.10 30.77 32.99 55.99 14.07 16.69 23.43 6.68 18.52 13.17 22 E4a_E5a KnownJunction 1 29.49 24.80 22.47 60.30 11.04 17.94 14.13 18.98 16.38 38.73 48.33 91.38 66.88 83.29 22.25 65.28 66.85 6.22 23.25 11.82 2.97 13.23 10.50 23 ER5a ExonRegion 1 22.49 16.38 14.62 37.50 18.58 32.58 15.10 13.04 18.25 35.16 39.92 104.39 120.77 96.84 31.39 44.91 53.32 12.57 19.55 17.67 7.74 16.26 15.99 24 E5a_E6a KnownJunction 0 13.56 24.47 7.51 25.30 21.65 21.81 13.34 10.27 18.78 39.54 33.69 111.34 93.83 72.87 39.68 30.08 50.68 20.10 36.33 26.97 11.37 22.04 4.35 25 ER6a ExonRegion 0 8.69 16.05 10.02 35.69 15.38 25.72 12.90 7.74 20.82 34.07 34.28 105.06 63.47 75.19 38.72 29.36 37.45 12.29 16.99 25.59 5.35 19.89 13.27 26 E6a_E7a KnownJunction 0 3.78 14.54 13.33 62.03 37.35 29.07 13.60 9.41 28.59 47.20 40.12 77.58 76.29 83.11 39.56 36.49 39.36 11.86 8.85 24.99 5.56 35.39 12.12 27 ER7a ExonRegion 0 19.92 25.14 9.96 43.22 22.32 20.39 12.36 11.82 19.90 34.02 43.49 107.34 45.77 69.58 25.03 23.04 52.40 11.59 17.58 20.92 6.68 18.20 14.29 28 E7a_E8a KnownJunction 0 25.04 17.89 16.03 42.22 28.61 26.97 23.01 16.06 19.13 31.48 40.85 113.59 28.24 72.05 41.16 18.88 38.15 8.54 0.00 14.96 2.35 21.31 4.35 29 E8_Aa NovelBoundary 0 0.00 11.71 3.67 15.68 0.00 11.58 2.25 0.00 9.58 21.76 0.00 0.00 12.34 0.00 0.00 0.00 0.00 0.00 9.22 5.69 0.00 0.00 4.35 30 ER8a ExonRegion 0 19.57 37.01 11.21 46.97 20.90 36.16 18.40 17.07 21.81 43.93 49.12 111.01 48.09 51.56 34.27 42.28 62.94 9.50 10.07 27.54 3.56 21.27 15.51 31 E8a_E9a KnownJunction 1 32.08 22.30 6.89 66.33 12.14 32.88 16.78 23.25 17.42 45.91 46.38 62.57 47.72 109.48 33.13 28.71 66.57 6.51 4.33 23.27 8.65 32.58 16.05 32 ER9a ExonRegion 0 17.69 30.87 11.08 50.03 26.77 26.21 20.73 12.62 17.84 38.64 21.51 75.85 33.79 46.39 34.81 26.58 29.42 7.46 9.84 10.78 3.76 22.89 8.40 33 E9_Da KnownBoundary 1 16.23 17.83 1.74 53.21 19.02 40.66 25.92 17.09 18.46 30.11 11.69 18.91 84.41 29.25 19.41 4.02 17.11 3.69 4.80 20.77 0.00 7.16 4.01 34 ER9b ExonRegion 0 12.05 24.67 10.93 46.90 19.63 13.23 8.64 12.05 13.02 26.85 9.00 42.46 28.41 22.69 23.73 9.86 11.41 1.91 6.50 6.97 0.54 13.17 3.38 35 ER9c ExonRegion 0 0.00 1.83 0.25 3.41 1.07 0.00 2.65 1.73 2.22 1.26 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.08 2.94 36 ER9d ExonRegion 0 0.00 0.00 0.00 1.87 0.00 0.00 1.65 0.22 0.46 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.04 0.00