Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CNOT6L Gene 0 73.69 67.02 32.95 76.51 119.60 55.26 69.54 43.30 67.28 58.45 5.80 50.30 43.83 25.96 17.46 26.74 51.39 27.59 23.81 42.06 18.95 61.22 29.18 2 264903 Transcript 1 26.55 28.60 13.17 36.80 50.74 20.92 37.47 20.88 46.68 27.03 4.70 37.31 33.28 32.08 7.84 40.25 43.87 31.33 14.97 34.86 23.33 45.66 28.77 3 445451 Transcript 0 0.44 0.13 0.04 1.45 0.74 1.39 0.69 1.26 4.86 1.45 0.00 0.00 1.85 0.66 0.00 0.59 0.84 4.86 1.57 1.19 2.98 2.96 0.00 4 IG7_SR6 SilentIntergenicRegion 0 2.36 2.42 1.63 0.00 0.00 7.76 3.09 1.66 0.49 0.93 2.13 0.00 0.00 0.00 0.00 0.00 4.32 0.00 13.97 1.39 0.79 1.36 1.88 5 IG7_AR2 ActiveIntergenicRegion 0 2.67 0.32 2.87 2.24 0.84 6.35 6.06 2.03 2.70 3.79 3.38 2.95 2.63 8.51 2.85 9.84 23.91 12.81 4.01 11.30 12.54 9.18 4.62 6 IG7_SR2 SilentIntergenicRegion 0 0.72 0.00 0.63 0.00 2.75 5.02 6.32 1.76 2.52 6.38 5.21 3.43 3.81 6.70 2.80 1.99 12.41 6.09 2.18 2.10 17.22 5.71 2.01 7 ER1a ExonRegion 0 0.46 0.00 0.00 0.00 0.00 0.00 0.46 0.00 0.00 0.00 0.00 0.00 0.61 2.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.89 8 ER1b ExonRegion 0 14.91 3.69 0.00 0.79 4.26 8.40 12.93 0.35 10.21 6.43 0.00 0.00 5.94 6.72 3.26 12.31 15.42 13.19 12.99 3.03 9.61 23.11 15.42 9 E1_Da KnownBoundary 0 11.78 2.96 0.00 2.06 3.06 9.71 7.68 0.00 12.36 7.87 0.00 0.00 0.00 0.00 0.00 3.67 16.64 17.08 11.48 8.50 2.90 9.80 0.00 10 E1a_E2a KnownJunction 0 2.74 5.33 0.00 0.00 0.00 2.21 5.61 1.81 10.76 6.63 0.00 0.00 0.00 2.24 0.00 14.27 3.55 6.72 12.24 0.00 12.54 22.23 18.52 11 ER1c ExonRegion 0 1.31 0.40 0.12 1.00 2.22 1.45 2.07 0.19 5.74 2.94 0.00 0.00 5.55 1.99 0.00 1.76 2.51 8.20 4.71 3.57 2.64 3.37 0.00 12 E1b_E2a KnownJunction 0 0.00 0.00 0.00 1.47 0.00 0.00 0.00 1.60 4.37 1.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.23 0.00 0.00 6.30 5.51 0.00 13 I1_AR1 ActiveIntronRegion 0 7.76 5.02 1.39 10.34 14.32 3.74 16.27 7.72 16.04 4.16 0.00 3.09 5.31 0.32 1.72 1.07 4.20 0.89 2.61 6.47 2.03 0.00 1.07 14 ER2a ExonRegion 1 15.94 8.37 2.86 7.32 15.94 14.37 15.69 11.40 44.70 24.47 6.94 26.30 24.22 30.37 7.06 26.41 63.85 27.17 18.49 36.03 42.27 40.37 23.64 15 E2a_E3a KnownJunction 1 19.63 8.95 7.04 14.48 7.13 28.85 36.57 29.66 66.38 44.91 4.37 37.81 73.70 62.75 0.00 39.48 71.15 61.02 19.11 28.83 74.50 70.30 58.05 16 ER3a ExonRegion 1 15.14 17.44 15.41 25.60 34.01 32.31 28.91 35.83 75.60 46.73 10.31 53.48 81.54 56.52 10.81 67.60 128.24 61.83 34.53 68.35 55.28 73.19 53.22 17 E3a_E4a KnownJunction 1 23.49 22.56 28.12 29.87 38.96 52.07 36.57 45.67 73.73 53.99 18.95 48.62 134.57 85.11 6.30 82.80 175.13 51.03 41.70 60.85 36.63 97.61 58.82 18 ER4a ExonRegion 1 26.09 28.59 20.06 29.46 41.60 23.52 43.11 34.23 81.66 47.20 9.15 71.99 84.53 70.20 19.09 80.01 132.65 68.09 34.00 56.68 50.63 85.59 61.74 19 E4a_E5a KnownJunction 0 15.78 34.07 29.74 63.20 33.62 28.85 36.17 51.18 85.39 31.72 5.21 113.14 74.02 43.68 15.20 84.51 93.78 86.84 34.17 62.32 52.02 56.09 37.99 20 ER5a ExonRegion 1 31.16 25.31 19.24 29.60 24.02 20.33 33.05 38.10 69.81 32.01 10.35 67.54 85.15 60.36 12.31 60.90 141.54 61.18 27.96 47.75 62.46 61.19 43.53 21 E5a_E6a KnownJunction 1 38.01 28.28 28.83 45.78 30.48 20.78 32.55 35.94 49.71 29.60 7.26 64.22 32.63 72.93 16.94 75.19 144.65 52.60 31.44 33.24 54.80 76.79 42.34 22 I5_SR1 SilentIntronRegion 0 20.37 7.87 3.63 8.99 19.42 0.77 8.63 4.12 5.98 4.08 0.00 1.49 2.42 0.00 3.05 0.93 2.07 1.68 3.66 1.80 0.00 0.22 0.61 23 I5_AR1 ActiveIntronRegion 0 16.30 8.64 4.89 14.59 15.81 0.58 14.72 12.04 10.41 6.22 0.00 0.00 1.35 0.00 3.63 1.40 2.08 0.80 0.50 7.34 0.00 0.33 0.46 24 ER6a ExonRegion 1 22.36 19.92 14.99 25.18 40.37 47.41 38.95 29.33 61.22 29.92 6.56 54.84 66.48 71.86 12.32 66.68 96.01 64.06 18.84 45.48 48.99 71.62 52.05 25 E6a_E7a KnownJunction 0 20.45 24.01 9.11 51.34 72.58 19.02 52.64 31.91 73.38 27.32 10.74 69.02 45.13 54.39 4.70 89.12 58.81 83.24 27.48 54.27 66.60 72.87 44.73 26 E6a_E8a KnownJunction 0 0.00 0.00 0.00 1.90 0.00 2.73 0.00 1.97 4.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 0.00 0.00 0.00 0.00 27 E7_Aa NovelBoundary 0 20.08 0.00 4.64 11.75 23.68 4.88 14.53 18.07 9.52 2.61 0.00 0.00 0.00 0.00 6.30 17.35 8.42 1.78 0.00 6.39 0.00 5.14 0.00 28 ER7a ExonRegion 1 27.30 28.08 15.64 32.29 52.35 26.00 46.60 26.74 62.94 28.45 7.85 62.42 65.81 58.16 10.96 58.41 83.07 46.70 14.58 57.19 35.76 57.27 44.90 29 E7_Da NovelBoundary 0 34.97 12.37 11.06 27.90 23.26 0.00 6.14 32.12 12.99 6.47 0.00 0.00 0.00 7.12 14.22 0.00 13.56 3.94 8.56 11.89 0.00 5.63 3.33 30 E7a_E8a KnownJunction 0 20.82 33.35 16.47 46.05 37.61 15.45 41.56 16.92 64.99 35.75 4.79 45.46 50.48 56.92 13.35 61.61 81.81 31.79 13.84 58.87 14.21 61.54 39.95 31 I7 Intron 0 20.12 7.74 2.16 12.16 13.01 6.18 10.15 11.64 7.75 3.89 0.12 2.45 2.09 0.88 1.16 1.02 2.37 1.92 1.89 5.77 0.62 2.67 1.28 32 I7_SR1 SilentIntronRegion 0 22.28 8.22 2.29 12.67 14.46 5.75 10.66 12.30 8.21 4.35 0.13 2.74 2.20 0.94 1.23 0.93 2.53 1.89 2.11 5.34 0.54 2.91 1.43 33 E8_Aa NovelBoundary 0 12.67 26.90 0.00 10.35 26.40 18.40 18.28 4.76 14.70 2.47 0.00 0.00 8.28 0.00 0.00 7.60 0.00 0.00 3.86 3.26 2.59 6.12 3.76 34 ER8a ExonRegion 0 25.17 31.12 16.05 24.74 48.03 32.03 43.79 28.21 57.05 35.69 9.51 79.66 61.42 55.05 21.82 62.01 101.43 39.73 27.21 70.49 21.53 61.23 47.86 35 E8a_E9a KnownJunction 0 28.89 42.30 20.99 60.90 72.16 29.41 74.86 45.67 72.83 54.50 19.22 161.75 106.16 77.52 29.30 85.70 114.26 27.03 18.07 81.24 39.72 79.24 64.88 36 ER9a ExonRegion 0 36.33 21.22 14.78 31.74 45.21 24.74 53.88 40.78 70.98 52.70 15.76 97.98 79.67 57.07 23.11 72.99 135.34 60.39 30.70 77.04 57.53 75.35 54.12 37 E9a_E10a KnownJunction 0 31.34 12.30 13.99 44.15 24.36 46.68 51.45 51.96 91.14 60.14 27.22 36.16 27.11 55.33 22.25 51.95 152.88 58.20 30.78 58.55 107.99 84.69 40.38 38 ER10a ExonRegion 0 22.88 21.00 16.36 28.88 38.66 30.36 46.58 32.88 70.01 55.25 10.83 68.93 66.28 54.84 17.04 73.05 101.10 77.32 42.29 61.51 71.81 68.34 59.66 39 E10a_E11a KnownJunction 0 31.49 22.04 10.94 33.96 51.27 27.60 38.64 26.04 75.06 60.73 11.63 67.22 84.57 31.55 5.44 43.58 71.53 50.08 39.91 43.02 40.40 63.38 63.51 40 ER11a ExonRegion 0 40.69 15.34 26.40 33.83 41.59 36.40 45.03 35.17 85.85 56.63 11.08 64.39 73.98 55.87 19.28 66.65 137.56 73.84 47.12 53.20 41.19 81.64 56.23 41 E11a_E12a KnownJunction 0 54.97 29.14 31.96 38.36 34.55 24.36 65.71 22.71 101.13 45.77 9.90 17.41 39.61 31.55 11.74 27.60 78.17 51.98 16.38 45.25 18.10 65.83 42.00 42 E12_Aa NovelBoundary 0 19.11 0.00 6.68 6.76 15.28 4.66 14.57 0.00 5.84 2.47 2.68 0.00 6.82 2.30 0.00 0.00 4.58 3.98 9.60 7.48 8.28 3.00 0.00 43 ER12a ExonRegion 0 38.19 27.65 23.21 38.77 81.30 42.75 57.42 25.78 71.66 41.03 9.20 69.41 70.80 49.37 19.65 44.70 105.07 54.08 36.53 49.61 48.75 74.69 52.82 44 E12_Da KnownBoundary 0 104.39 64.00 51.92 57.57 211.71 73.93 161.24 52.90 96.35 61.22 10.06 110.59 88.31 66.22 27.20 34.61 78.45 28.73 75.67 68.07 21.13 113.04 55.06 45 ER12b ExonRegion 0 87.56 80.83 37.84 91.15 141.92 62.85 77.96 47.91 68.03 64.06 4.79 46.96 37.66 18.59 18.05 18.12 35.95 19.55 21.70 38.81 10.90 60.07 23.61