Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RAP1GDS1 Gene 0 92.20 139.88 79.23 92.22 95.13 207.12 70.01 76.30 93.80 107.63 251.99 214.87 61.98 47.86 4.18 180.47 109.60 84.26 85.27 108.11 61.43 86.38 51.62 2 264572 Transcript 0 0.00 0.00 1.80 10.39 0.00 2.90 0.00 0.00 5.03 3.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.82 4.61 2.43 3.09 0.00 0.00 3 380158 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 339360 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 453712 Transcript 0 13.34 28.61 0.00 9.92 11.63 19.25 5.96 2.22 18.87 25.22 36.96 39.16 6.82 2.35 0.00 16.15 15.90 11.98 14.31 23.71 5.13 3.00 12.04 6 408900 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 408927 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 IG19_AR7 ActiveIntergenicRegion 0 4.03 5.24 2.84 6.20 6.40 2.34 5.00 3.17 9.74 5.41 6.29 17.86 1.15 1.22 0.00 2.31 2.91 5.01 2.81 5.91 1.08 2.36 3.46 9 ER1a ExonRegion 1 12.22 31.21 8.83 5.67 7.74 78.48 19.89 8.39 12.99 20.89 57.83 2.83 4.59 15.32 3.02 51.72 33.04 33.55 25.27 31.52 30.59 15.44 30.43 10 E1a_E2a KnownJunction 0 2.96 20.92 4.76 2.06 0.00 23.00 11.84 10.56 6.31 15.88 36.80 7.65 13.80 4.94 0.00 16.92 16.74 10.86 12.14 31.83 7.35 0.00 13.57 11 E1a_E2b KnownJunction 0 6.82 34.80 8.10 15.75 0.00 25.55 15.28 11.75 43.23 28.55 65.44 25.96 13.47 18.95 16.19 57.42 18.51 23.75 17.69 53.05 31.94 16.72 11.27 12 ER2a ExonRegion 0 3.70 23.39 7.05 7.84 0.00 25.67 15.23 10.37 16.37 22.94 63.30 16.24 10.55 9.74 2.90 47.55 24.76 20.33 26.28 39.89 12.67 5.73 14.68 13 ER2b ExonRegion 1 13.27 39.04 32.35 39.98 15.45 35.00 21.36 32.99 61.40 87.38 241.38 120.05 22.57 47.84 7.54 148.11 104.73 84.58 62.67 92.19 107.47 36.45 46.77 14 E2a_E3a KnownJunction 0 10.67 40.06 49.02 61.00 39.81 63.77 16.43 47.85 83.88 115.45 276.39 196.86 47.40 74.22 5.07 212.51 153.34 159.06 120.94 179.93 136.03 85.54 95.01 15 ER3a ExonRegion 0 18.00 66.41 54.51 73.45 50.45 200.44 44.89 58.80 101.16 119.06 379.84 249.17 71.61 77.93 6.23 277.71 171.57 165.95 103.67 158.69 131.83 78.48 80.48 16 E3a_E4a KnownJunction 0 24.15 118.79 59.70 71.52 46.94 261.55 83.91 76.27 87.35 135.36 356.35 343.76 80.68 81.94 9.64 321.37 225.81 130.50 114.83 191.88 139.31 122.10 92.02 17 ER4a ExonRegion 0 28.72 122.60 68.20 72.88 61.65 177.88 74.32 71.65 93.55 122.35 398.62 279.63 79.66 93.26 6.63 302.21 199.63 161.80 108.63 169.20 125.63 95.78 68.94 18 E4a_E5a KnownJunction 0 29.34 49.20 20.05 30.47 44.31 41.17 57.94 17.91 28.70 62.29 355.35 228.37 52.92 80.88 5.32 260.87 190.65 96.42 80.38 169.83 102.98 76.05 53.61 19 E4a_E6a KnownJunction 0 3.78 87.16 32.41 35.79 28.18 137.99 11.84 47.65 58.25 71.08 24.80 31.21 7.14 2.41 0.00 27.77 13.28 43.11 4.80 72.42 19.27 13.78 0.00 20 E4a_E7a KnownJunction 0 0.00 0.00 1.80 10.39 0.00 2.90 0.00 0.00 5.03 3.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.82 4.61 2.43 3.09 0.00 0.00 21 ER5a ExonRegion 0 45.83 53.87 21.32 44.51 45.67 42.68 61.14 35.19 27.86 61.28 334.50 252.49 69.30 80.80 4.32 273.66 163.32 96.06 80.78 105.27 78.82 89.79 70.56 22 E5a_E6a KnownJunction 1 33.34 64.07 37.20 51.77 39.56 46.62 65.05 37.95 29.54 65.06 378.62 107.13 87.33 98.65 9.64 280.61 193.92 94.26 75.39 124.83 85.69 83.22 70.08 23 E6_Aa NovelBoundary 0 7.56 3.16 7.33 8.92 0.00 0.00 35.68 2.55 3.53 1.24 0.00 38.71 22.08 7.36 0.00 4.27 0.00 1.99 4.71 0.00 0.00 11.45 0.00 24 ER6a ExonRegion 0 42.07 137.94 61.09 74.97 83.28 207.33 83.10 89.26 95.30 117.59 383.58 301.82 91.87 84.58 4.84 269.24 168.06 117.91 88.89 164.23 70.47 97.99 87.28 25 E6_Da NovelBoundary 0 21.78 9.93 5.17 16.91 8.66 15.90 32.59 3.78 0.00 12.14 11.85 5.40 14.93 7.06 8.90 0.00 8.13 6.14 0.00 0.00 0.00 2.88 4.35 26 E6a_E7a KnownJunction 0 45.79 149.18 79.68 86.97 85.91 245.88 91.02 96.15 98.47 129.07 384.10 350.51 91.07 83.35 5.69 266.43 184.39 92.03 109.74 163.95 47.20 85.67 70.77 27 I6_AR1 ActiveIntronRegion 0 2.85 3.43 7.02 11.40 7.42 12.50 26.85 3.68 2.79 5.27 2.40 19.43 6.18 3.59 0.80 8.77 4.63 0.82 0.99 3.31 0.00 3.47 1.52 28 I6_SR1 SilentIntronRegion 1 9.88 3.39 3.68 16.81 18.73 10.39 21.85 8.35 2.47 9.18 1.61 65.66 9.38 6.50 2.90 2.97 3.30 3.70 0.00 0.00 0.00 3.82 2.94 29 ER7a ExonRegion 0 44.56 203.33 79.19 99.62 121.41 262.67 102.10 82.69 115.71 113.09 388.48 333.47 106.49 74.53 3.50 194.58 155.01 67.05 101.22 169.18 53.62 111.14 60.95 30 E7a_E8a KnownJunction 0 85.20 283.63 82.14 104.68 90.66 218.28 108.95 54.14 102.69 92.03 424.37 334.01 121.58 49.44 4.45 198.67 111.27 43.82 56.19 205.37 39.23 115.49 61.12 31 E7a_E9a NovelJunction 0 0.00 2.70 3.19 3.53 0.00 20.56 5.92 1.73 4.34 2.36 8.00 12.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER8a ExonRegion 0 73.46 325.06 65.59 121.78 97.26 220.57 83.73 63.33 104.97 117.96 347.87 410.10 110.31 45.45 2.01 184.19 136.92 39.09 82.89 151.74 46.43 120.09 49.03 33 E8a_E9a KnownJunction 1 89.05 309.16 89.06 176.20 116.72 360.70 133.28 94.18 119.62 136.70 302.55 577.39 67.37 72.81 0.00 188.33 126.51 46.05 145.51 172.90 64.37 135.75 44.30 34 ER9a ExonRegion 0 79.96 229.22 97.53 165.15 128.84 336.71 113.25 86.29 136.02 127.91 338.54 511.34 152.67 51.76 1.69 263.06 141.94 83.32 101.67 167.75 72.00 148.92 66.43 35 E9a_E10a KnownJunction 0 126.17 301.13 105.53 205.10 126.49 225.95 94.55 126.63 144.65 159.51 346.04 478.66 140.25 53.86 0.00 221.82 182.23 63.63 68.90 172.26 88.77 112.06 34.83 36 ER10a ExonRegion 0 84.24 313.41 118.56 152.11 91.25 278.85 93.72 102.09 142.53 147.79 404.49 415.47 131.36 63.00 3.91 247.28 163.82 113.42 152.85 175.10 83.37 136.79 66.41 37 E10a_E11a KnownJunction 0 90.09 292.18 102.89 115.24 156.37 336.45 116.46 95.09 142.13 152.60 310.39 348.11 99.99 68.22 5.32 242.07 126.60 127.30 83.11 143.69 68.70 86.95 63.25 38 ER11a ExonRegion 0 76.77 201.31 91.29 115.32 122.45 367.20 99.71 108.70 129.64 164.48 325.66 362.09 87.55 73.69 8.43 239.02 164.34 97.90 111.56 165.97 84.79 103.02 62.83 39 E11a_E12a KnownJunction 0 130.84 175.63 75.01 86.97 94.48 324.30 94.46 85.80 117.56 125.69 258.07 270.54 105.19 75.64 0.00 227.89 118.93 122.70 118.31 151.16 109.78 98.28 101.75 40 E11a_E12b KnownJunction 0 13.34 28.61 0.00 9.92 11.63 19.25 5.96 2.22 18.87 25.22 36.96 39.16 6.82 2.35 0.00 16.15 15.90 11.98 14.31 23.71 5.13 3.00 12.04 41 ER12a ExonRegion 0 119.05 174.89 73.52 85.18 98.33 295.24 87.38 75.62 120.42 138.20 280.27 310.64 94.97 72.27 2.90 260.80 122.96 145.05 119.45 163.30 114.04 97.40 84.43 42 ER12b ExonRegion 0 115.52 193.32 103.64 117.56 115.75 314.09 93.93 96.45 125.37 170.01 388.68 361.96 85.01 75.33 6.68 281.54 154.90 163.19 149.69 165.50 109.76 100.27 78.99 43 E12a_E13a KnownJunction 0 216.63 257.06 113.18 140.61 174.96 324.98 139.42 118.38 117.82 187.68 446.85 309.40 90.90 94.41 4.45 319.23 191.30 105.46 150.69 199.04 112.99 121.12 53.86 44 ER13a ExonRegion 0 189.22 236.92 157.07 151.27 167.12 406.06 98.90 129.25 148.07 200.57 478.40 402.78 104.95 78.21 2.58 328.41 202.50 151.81 168.10 192.16 90.77 132.38 72.14 45 E13a_E14a KnownJunction 0 206.11 234.10 184.65 167.44 157.47 482.39 102.10 129.67 143.23 196.87 379.52 314.20 63.79 53.92 0.00 236.26 163.72 135.47 140.05 181.72 81.79 96.44 46.69 46 I13_AR1 ActiveIntronRegion 0 19.33 3.72 6.57 12.78 16.41 11.27 12.24 6.66 9.84 3.70 7.60 17.21 16.18 2.62 0.00 9.57 6.33 1.92 3.45 7.12 1.59 6.92 0.75 47 E14_Aa NovelBoundary 0 45.49 12.30 20.11 16.48 8.06 13.51 18.24 4.35 18.78 16.31 7.11 24.01 0.00 2.47 4.70 8.63 13.00 6.34 4.52 6.33 0.00 17.39 4.27 48 ER14a ExonRegion 0 174.34 245.21 167.32 183.86 178.59 459.27 125.71 145.40 167.23 210.45 496.13 452.61 102.78 63.86 4.30 404.72 214.94 185.96 205.44 192.87 81.93 151.52 70.93 49 E14a_E15a KnownJunction 0 197.15 294.09 173.38 202.44 312.99 730.72 177.75 165.69 181.28 211.73 487.07 403.48 65.26 73.93 4.45 385.71 187.28 194.21 197.09 230.10 107.06 147.63 68.29 50 E15_Aa NovelBoundary 0 31.12 11.91 16.14 22.57 41.68 37.99 35.68 20.17 15.31 11.39 9.16 6.30 0.00 0.00 0.00 11.79 0.00 1.95 0.00 6.07 5.75 5.69 10.50 51 ER15a ExonRegion 0 114.61 110.70 80.52 85.88 100.84 177.23 61.68 75.75 86.45 91.83 158.32 118.63 38.47 31.20 3.80 118.97 67.61 59.97 62.84 69.71 41.87 73.48 39.07