Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BMPR1B Gene 0 11.41 51.65 17.74 288.50 206.17 264.81 92.30 167.53 209.80 147.25 0.02 0.00 0.00 0.00 0.00 0.00 0.03 142.14 13.29 195.33 2.02 14.35 9.27 2 264568 Transcript 0 0.70 11.77 6.00 56.26 34.44 100.56 24.25 104.98 140.85 112.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 205.05 20.50 147.15 4.18 12.76 20.88 3 440890 Transcript 0 5.09 21.96 7.34 125.18 86.82 99.51 35.74 59.86 70.59 51.15 0.01 0.00 0.00 0.00 0.00 0.00 0.00 18.95 4.64 62.41 0.37 4.97 1.93 4 394931 Transcript 0 0.04 0.41 0.57 2.60 1.44 8.08 3.09 4.00 7.55 2.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.89 0.00 5.00 0.04 0.27 0.27 5 IG7_AR1 ActiveIntergenicRegion 0 1.22 1.43 4.42 10.22 7.64 2.38 1.95 4.79 9.33 26.33 0.00 0.00 2.67 0.50 0.76 0.00 1.23 0.86 0.00 22.54 0.41 2.71 0.55 6 ER1a ExonRegion 0 0.00 5.13 0.72 18.43 51.74 188.43 33.96 33.83 38.46 28.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 97.29 7.95 47.36 1.59 0.33 5.96 7 E1a_E2a KnownJunction 0 0.00 2.76 1.42 23.74 23.17 76.43 7.82 41.07 70.98 38.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 194.00 0.00 58.42 6.18 2.88 12.12 8 I1 Intron 0 0.98 4.24 1.17 22.58 14.39 9.02 21.30 14.43 16.20 8.44 0.00 0.00 0.01 0.00 0.01 0.00 0.00 11.41 1.49 24.53 0.05 0.09 0.46 9 I1_SR1 SilentIntronRegion 0 1.87 5.63 1.84 19.58 17.33 14.11 27.86 25.65 24.13 10.90 0.00 0.00 0.05 0.00 0.00 0.00 0.00 15.96 2.83 39.39 0.07 0.15 0.99 10 I1_AR1 ActiveIntronRegion 0 0.53 5.57 2.93 27.28 18.62 9.99 29.74 31.68 23.06 13.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.15 4.96 34.48 0.00 0.00 0.00 11 I1_AR2 ActiveIntronRegion 0 0.00 17.75 4.90 25.56 22.87 13.24 29.84 37.11 24.63 10.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.40 2.45 23.82 0.00 0.00 0.00 12 I1_SR2 SilentIntronRegion 0 3.73 8.52 3.01 31.25 21.34 13.49 29.66 46.09 30.82 9.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.46 3.34 26.09 0.00 0.00 0.00 13 I1_SR3 SilentIntronRegion 0 1.18 6.56 1.86 34.27 22.64 13.16 29.09 21.60 25.88 13.33 0.00 0.00 0.00 0.00 0.01 0.00 0.00 16.55 1.93 33.66 0.04 0.09 0.65 14 I1_AR5 ActiveIntronRegion 0 0.00 2.23 2.58 60.56 7.55 4.32 15.76 10.07 8.94 8.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.36 0.00 13.69 0.00 0.00 0.00 15 ER2a ExonRegion 0 0.00 14.85 5.58 56.38 26.22 70.73 10.33 105.95 158.69 109.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 302.90 31.54 174.77 4.00 15.03 30.08 16 E2a_E3a KnownJunction 0 0.00 11.45 12.80 90.53 27.76 41.51 12.98 212.35 261.40 225.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 296.14 62.21 273.44 5.56 25.47 42.94 17 E2a_E5b NovelJunction 0 0.00 0.00 0.00 5.19 4.33 5.05 4.50 15.73 14.06 7.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.56 0.00 15.66 0.00 0.00 0.00 18 I2_AR1 ActiveIntronRegion 0 0.81 13.44 0.61 29.87 36.48 11.60 36.49 25.65 31.66 17.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.73 2.89 32.84 0.00 0.27 1.52 19 I2_SR2 SilentIntronRegion 0 4.70 25.34 8.78 101.19 74.96 20.71 38.74 63.40 60.82 36.92 0.00 0.00 0.00 0.00 0.12 0.00 0.00 29.47 4.24 39.44 0.00 0.31 0.79 20 I2_AR2 ActiveIntronRegion 0 1.41 22.71 3.22 82.57 47.46 19.15 39.46 38.19 52.71 28.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43.13 3.41 43.40 0.00 0.00 0.98 21 I2_SR3 SilentIntronRegion 0 0.35 3.20 0.99 11.63 8.27 4.32 21.76 11.91 11.61 7.10 0.00 0.02 0.00 0.00 0.00 0.00 0.00 5.44 1.21 19.52 0.05 0.07 0.23 22 I2_AR4 ActiveIntronRegion 0 0.00 4.07 0.00 9.09 11.37 10.09 33.32 22.18 13.69 10.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.93 0.00 23.58 0.00 0.00 0.00 23 I2_AR5 ActiveIntronRegion 0 3.89 5.44 0.00 11.93 7.52 12.04 23.01 21.77 13.72 11.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.00 0.26 10.35 0.00 0.00 0.00 24 I2_AR7 ActiveIntronRegion 0 1.15 2.82 1.79 18.90 13.57 4.14 23.49 11.89 7.38 7.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.96 0.69 20.49 0.00 0.00 0.32 25 I2_AR9 ActiveIntronRegion 0 0.79 3.46 2.59 29.24 11.48 10.68 20.51 14.92 18.54 6.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.01 0.79 19.68 0.27 0.00 0.10 26 ER3a ExonRegion 0 0.80 9.20 7.89 75.93 35.91 86.15 36.89 152.05 195.59 165.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 186.27 21.33 178.63 5.10 11.47 18.36 27 E3a_E5b KnownJunction 0 3.41 27.23 7.57 72.55 41.85 140.09 43.54 84.61 119.96 105.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 153.67 0.00 150.27 2.66 21.37 15.79 28 I3 Intron 0 0.81 3.84 1.27 24.25 14.03 4.72 20.81 18.38 18.36 9.67 0.00 0.00 0.00 0.00 0.00 0.00 0.01 5.61 0.80 15.83 0.03 0.04 0.20 29 I3_SR2 SilentIntronRegion 0 0.81 3.82 1.27 24.31 14.06 4.74 20.90 18.46 18.36 9.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.47 0.80 15.78 0.03 0.04 0.21 30 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 4.95 3.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.96 2.23 12.24 0.00 0.00 0.00 31 E4a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.03 0.00 9.46 0.00 0.00 0.00 32 ER5a ExonRegion 0 0.04 0.41 0.57 2.60 1.44 8.08 3.09 4.00 7.55 2.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.89 0.00 5.00 0.04 0.27 0.27 33 E5_Ab KnownBoundary 0 0.00 0.00 1.54 2.06 0.00 16.24 7.46 10.60 7.49 2.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.15 0.00 6.52 0.00 0.00 0.00 34 ER5b ExonRegion 0 3.73 33.97 16.42 145.30 157.25 459.70 93.80 201.62 265.91 208.59 0.00 0.00 0.00 0.00 0.00 0.00 1.06 476.70 23.66 342.99 4.38 23.40 31.03 35 E5a_E6a KnownJunction 0 3.11 29.47 11.83 186.52 140.15 209.37 108.95 201.18 208.36 174.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 433.06 9.60 337.35 5.50 27.37 23.73 36 ER6a ExonRegion 0 2.82 19.70 7.73 147.22 113.81 180.48 76.42 152.56 232.95 176.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 349.51 15.86 279.47 4.54 17.13 18.33 37 E6a_E7a KnownJunction 0 0.00 18.94 8.52 150.93 96.69 125.33 78.30 150.50 219.82 175.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 256.80 22.97 277.46 5.93 5.69 4.27 38 ER7a ExonRegion 0 5.34 30.27 11.68 217.57 137.84 223.47 88.85 216.36 309.39 215.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 340.92 7.92 354.86 1.97 19.24 15.74 39 E7a_E8a KnownJunction 0 0.00 41.83 13.04 154.53 118.59 253.66 111.42 158.92 240.36 156.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 359.65 22.97 317.67 3.15 22.72 24.84 40 ER8a ExonRegion 0 2.42 49.35 6.19 150.97 182.12 255.65 99.95 147.44 248.44 147.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 174.53 10.71 230.95 0.68 10.18 9.11 41 E8a_E9a KnownJunction 0 7.56 74.07 9.61 179.60 284.72 442.98 164.06 162.12 240.45 138.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 143.30 4.71 275.55 0.00 6.18 0.00 42 ER9a ExonRegion 0 5.30 47.75 8.07 172.24 156.14 228.71 95.16 125.44 195.29 129.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 244.93 11.07 232.24 1.38 14.60 8.45 43 E9a_E10a KnownJunction 0 0.00 23.88 10.14 204.00 77.42 138.73 89.12 125.69 209.29 138.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 276.74 12.80 217.32 6.05 11.94 15.96 44 ER10a ExonRegion 0 6.08 41.81 9.42 201.38 137.63 215.93 103.14 146.73 202.95 146.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 333.22 16.83 264.23 5.22 14.29 16.63 45 E10a_E11a KnownJunction 0 0.00 60.52 4.58 114.87 252.72 327.54 122.07 141.46 202.37 135.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 277.99 31.15 236.56 5.81 8.70 4.35 46 ER11a ExonRegion 0 9.18 40.56 11.44 208.23 154.91 263.55 93.89 174.49 254.03 163.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 258.77 18.02 286.87 3.88 14.07 15.74 47 E11a_E12a KnownJunction 0 13.85 26.97 8.19 176.70 187.69 284.44 94.64 167.38 251.36 154.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 166.27 19.11 236.17 0.00 11.02 8.02 48 ER12a ExonRegion 0 7.23 28.32 17.57 197.94 134.65 237.55 68.31 161.85 260.39 161.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 338.06 19.73 302.30 4.11 11.51 20.56 49 E12a_E13a KnownJunction 0 13.34 47.75 23.54 199.74 141.17 223.45 61.39 155.18 231.71 148.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 312.23 4.61 298.05 3.09 6.18 11.44 50 ER13a ExonRegion 0 10.76 22.87 22.63 220.32 138.08 260.25 82.15 173.56 237.97 147.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 431.48 15.03 294.67 4.79 12.72 14.17 51 E13a_E14a KnownJunction 0 7.48 15.59 16.50 222.95 95.33 294.60 81.75 146.92 205.18 119.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 409.19 12.52 261.74 0.00 11.45 27.83 52 ER14a ExonRegion 0 7.83 36.16 15.16 173.62 126.86 232.75 75.48 174.15 205.42 121.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 292.47 16.64 236.20 3.87 12.36 9.94 53 E14_Da KnownBoundary 0 14.45 32.95 6.12 146.24 349.75 426.18 133.02 151.40 212.79 119.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 104.92 12.80 260.21 0.00 19.29 3.93 54 ER14b ExonRegion 0 5.49 20.38 9.00 126.15 185.57 209.50 88.23 140.88 161.95 97.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 96.18 12.85 180.20 1.21 27.66 8.29 55 E14_Db KnownBoundary 0 0.00 25.59 16.82 246.09 203.65 231.51 129.66 311.63 286.92 208.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 122.49 8.75 228.82 0.00 65.89 19.55 56 ER14c ExonRegion 0 15.28 65.87 22.03 375.55 260.46 291.47 103.54 179.59 211.76 153.46 0.03 0.00 0.00 0.00 0.00 0.00 0.00 53.87 11.69 165.53 1.12 14.92 5.80 57 IG8 Intergenic 0 2.23 9.80 2.48 20.82 18.22 12.00 13.35 19.76 25.56 15.40 0.00 0.00 0.00 0.00 0.08 0.00 0.00 22.06 12.06 28.74 0.00 0.00 0.22 58 IG8_AR2 ActiveIntergenicRegion 0 3.16 5.70 1.36 17.07 30.99 16.10 12.12 14.92 18.92 10.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.24 5.95 19.87 0.00 0.00 0.55 59 IG8_AR4 ActiveIntergenicRegion 0 0.00 12.43 3.60 21.39 44.62 14.42 20.15 33.37 25.24 18.12 0.00 0.00 0.00 0.00 0.97 0.00 0.00 22.82 23.60 27.19 0.00 0.00 0.00 60 IG8_SR2 SilentIntergenicRegion 0 2.31 10.91 2.76 22.73 16.24 11.81 13.39 20.97 28.02 16.81 0.00 0.00 0.00 0.00 0.05 0.00 0.00 25.37 13.07 31.36 0.00 0.00 0.21