Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC096727.4 Gene 0 20.47 36.21 11.46 23.51 15.13 26.57 14.45 11.28 14.63 17.73 21.42 19.65 20.15 16.10 15.93 16.43 15.78 16.97 15.72 19.11 9.24 7.10 6.52 2 498917 Transcript 0 32.94 60.42 19.49 34.49 23.35 44.78 17.84 17.30 19.06 23.31 28.94 22.68 20.76 16.62 21.50 21.78 19.51 22.37 21.54 21.24 17.02 10.13 11.60 3 500538 Transcript 0 6.74 15.19 5.26 15.85 16.35 14.37 9.66 4.94 8.44 17.49 8.45 12.01 13.79 13.29 10.76 9.55 14.64 10.81 11.48 15.52 4.71 4.77 2.98 4 499180 Transcript 0 0.18 0.04 0.00 0.25 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 14.12 25.67 7.47 15.44 17.46 44.17 13.35 8.58 7.80 12.57 11.81 1.90 2.12 4.22 11.07 9.32 20.85 15.28 16.32 20.60 24.56 8.99 18.84 6 E1_Ab KnownBoundary 0 52.53 60.58 16.82 43.85 31.92 111.19 51.01 13.55 16.09 32.56 38.80 5.70 12.01 20.95 19.16 51.52 37.12 47.75 29.84 48.26 24.65 30.19 44.56 7 ER1b ExonRegion 0 63.15 78.71 22.23 42.28 57.06 111.77 38.72 17.65 32.65 50.05 87.06 9.64 15.14 81.18 72.86 76.82 66.47 81.11 75.44 68.43 39.51 24.75 30.89 8 E1a_E2a KnownJunction 0 13.56 2.83 22.53 11.92 0.00 5.51 7.20 12.57 20.69 22.03 53.33 43.06 13.64 6.71 6.30 7.18 7.48 41.04 46.78 37.01 35.03 3.12 8.02 9 E1a_E4a NovelJunction 0 3.41 0.00 3.67 14.65 0.00 0.00 0.00 1.52 1.36 23.61 4.90 6.90 6.82 2.47 16.69 4.36 20.57 4.27 8.94 9.20 2.41 8.94 3.76 10 I1_SR4 SilentIntronRegion 0 2.12 0.00 0.00 4.09 0.00 3.67 0.00 0.00 6.02 2.29 1.93 0.00 3.52 9.54 6.53 4.09 6.60 7.85 0.00 4.26 0.00 0.00 0.00 11 ER2a ExonRegion 0 9.31 30.97 22.67 35.48 8.08 53.13 18.20 17.66 41.83 36.27 73.40 28.66 28.83 42.95 29.96 41.69 36.81 49.92 36.25 58.73 29.68 13.53 18.65 12 E2_Da KnownBoundary 0 34.38 113.01 16.44 53.57 15.20 133.67 53.26 33.89 38.48 33.07 68.12 24.01 26.46 15.89 13.97 32.21 35.25 52.89 28.42 56.82 22.92 17.08 19.80 13 E2a_E3a KnownJunction 0 0.00 0.00 3.43 0.00 0.00 0.00 0.00 0.00 0.00 1.21 0.00 0.00 0.00 0.00 0.00 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER2b ExonRegion 0 38.86 76.38 27.39 44.18 19.11 77.23 24.74 34.33 45.52 44.05 68.14 52.51 45.76 51.58 26.49 41.40 43.15 59.19 40.24 38.37 27.38 10.58 10.04 15 E2_Db NovelBoundary 0 14.37 65.51 4.05 28.97 35.14 73.82 34.14 20.13 20.54 15.28 33.32 12.30 46.43 22.13 15.20 49.90 17.77 37.35 34.45 18.54 17.54 5.82 0.00 16 E2b_E3a NovelJunction 0 9.41 84.39 11.50 23.67 36.59 37.88 8.17 1.52 5.87 13.43 22.53 6.30 6.82 9.59 0.00 12.73 0.00 3.27 18.17 8.56 2.72 2.39 4.35 17 E2b_E4a KnownJunction 0 3.63 5.39 1.83 3.23 4.33 9.94 0.00 2.34 5.24 1.50 0.00 12.60 6.33 2.30 0.00 0.00 0.00 8.37 0.00 5.31 0.00 0.00 0.00 18 I2 Intron 0 25.33 46.04 22.81 32.76 23.67 80.16 17.91 14.07 19.16 24.90 30.18 34.86 39.34 37.01 20.96 40.21 28.34 47.82 26.52 31.56 17.20 10.30 12.99 19 I2_AR1 ActiveIntronRegion 0 25.46 46.27 22.92 32.93 23.78 80.57 18.01 14.14 19.24 25.03 30.33 35.04 39.52 37.20 21.07 40.42 28.49 48.06 26.66 31.72 17.29 10.35 13.06 20 E3_Aa NovelBoundary 0 86.16 271.93 27.44 49.51 57.47 79.67 36.08 19.96 29.72 35.24 38.38 35.11 65.09 14.60 22.25 36.66 38.99 30.92 21.37 23.46 22.86 24.00 13.06 21 ER3a ExonRegion 0 84.70 155.59 47.56 88.04 52.60 90.18 40.16 43.31 49.39 56.15 75.02 66.15 60.18 45.64 53.43 52.68 37.68 51.83 48.30 43.11 26.50 21.41 15.97 22 E3_Da NovelBoundary 0 79.27 35.06 38.91 33.36 16.38 75.92 17.27 26.86 31.13 47.84 48.80 17.56 41.23 38.55 32.88 21.28 39.08 36.11 34.82 35.73 7.85 7.23 10.84 23 E4_Aa NovelBoundary 0 3.41 0.00 0.00 0.00 0.00 8.69 0.00 0.00 0.00 0.00 2.05 6.30 30.19 0.00 0.00 0.00 4.30 0.00 0.00 0.00 0.00 0.00 0.00 24 ER4a ExonRegion 0 4.38 8.30 7.75 27.40 30.62 26.47 12.84 3.15 9.28 28.32 9.69 27.10 23.16 40.68 51.28 21.17 34.18 12.58 22.10 27.24 9.08 12.76 7.19 25 E4a_E5a KnownJunction 0 3.78 27.69 10.41 32.93 75.72 14.08 22.74 3.61 11.75 44.27 4.74 0.00 6.82 23.78 17.80 15.55 32.54 20.35 28.05 20.45 6.18 8.27 0.00 26 ER5a ExonRegion 0 6.04 21.07 5.55 32.77 34.65 12.12 11.86 3.97 9.02 39.22 5.24 19.91 31.33 17.66 16.33 15.66 20.86 14.63 21.35 30.55 4.77 6.23 4.48 27 E5_Da NovelBoundary 0 17.19 9.60 7.78 4.13 3.74 0.00 3.36 0.00 3.50 4.32 0.00 5.70 26.13 4.30 8.90 4.36 13.56 0.00 4.80 0.00 9.02 0.00 0.00 28 E5a_E6a KnownJunction 0 0.00 11.97 3.10 20.01 7.64 11.64 6.36 1.77 6.77 30.38 4.79 0.00 6.82 10.12 0.00 4.36 17.20 3.36 9.22 20.45 0.00 5.63 0.00 29 E6_Aa NovelBoundary 0 2135.05 3596.46 2643.31 4358.49 2192.87 1029.80 5184.04 4286.86 5158.89 3462.80 964.93 1223.80 1919.03 419.27 721.43 1710.24 2669.75 1981.06 1471.57 4067.75 496.88 816.18 1245.87 30 ER6a ExonRegion 0 24.03 31.15 7.05 27.53 24.12 20.47 37.39 10.14 13.03 21.71 8.73 31.95 45.30 13.28 17.08 16.50 27.45 11.27 16.86 43.84 9.10 13.11 13.55 31 E6_Da NovelBoundary 0 0.00 15.79 3.87 31.23 34.47 0.00 10.51 0.00 11.00 21.52 4.53 10.80 27.76 7.24 14.71 12.13 8.88 4.89 0.00 26.46 0.00 0.00 6.83 32 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 Ix_AR1 ActiveIntronRegion 0 3.11 4.13 0.00 12.23 11.57 0.00 2.69 0.97 2.03 2.29 0.00 15.66 44.28 2.29 10.15 2.10 2.33 1.85 2.53 6.82 0.00 3.19 5.70 34 E7_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 4.06 0.00 1.68 1.61 2.37 44.11 12.82 4.83 0.00 0.00 0.00 0.00 0.00 3.00 0.00 0.00 0.00 35 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.03 0.04 0.00 0.00 0.17 0.06 0.00 0.00 0.10 0.17 0.00 0.25 0.00 0.00 0.00 0.00 0.00 0.00 36 E7_Da NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 2.73 0.00 0.00 0.00 1.05 0.00 0.00 20.13 0.00 0.00 3.76 3.93 0.00 0.00 0.00 3.15 0.00 0.00 37 E7a_E9b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 ER9a ExonRegion 0 0.00 0.21 0.00 0.42 0.00 0.00 0.00 0.00 0.00 0.09 0.00 0.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 E9_Ab KnownBoundary 0 7.26 92.35 26.08 25.54 3.48 47.08 65.54 13.23 21.27 21.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39.17 28.61 137.23 8.15 11.08 14.00 42 ER9b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 E9_Da NovelBoundary 0 0.00 19.86 5.50 25.01 7.89 40.03 25.08 8.79 20.08 11.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.83 22.40 24.67 2.72 14.27 3.67 44 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 E9a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 ER10a ExonRegion 0 0.88 0.00 0.00 0.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 ER11a ExonRegion 0 0.13 0.38 0.00 2.13 0.00 0.45 0.00 0.00 0.68 0.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.64 0.54