Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KIAA0114 Gene 0 250.11 403.62 760.89 445.94 133.25 162.84 70.45 104.77 107.76 138.28 321.44 176.68 62.67 172.10 250.32 108.03 118.42 159.91 489.77 193.57 82.94 103.63 86.52 2 411630 Transcript 0 47.64 34.57 7.30 3.58 6.86 23.87 5.05 2.28 2.49 2.86 17.76 0.00 1.70 12.71 21.74 11.11 5.45 7.20 3.05 9.22 6.58 3.99 12.38 3 441504 Transcript 1 15.85 15.54 22.21 15.24 6.85 7.91 2.41 3.82 4.02 5.24 59.43 7.36 3.48 35.93 39.76 28.34 19.51 21.47 22.80 16.62 9.51 5.00 14.89 4 425653 Transcript 0 44.11 62.67 18.83 10.35 8.33 19.13 6.95 3.14 2.86 4.74 21.09 0.30 0.32 19.30 27.76 10.00 6.38 8.69 33.95 13.59 4.36 5.30 10.08 5 444958 Transcript 0 7.40 2.38 0.83 7.73 6.84 1.88 1.22 2.65 4.18 3.56 8.34 5.02 1.71 10.29 8.90 0.82 0.26 0.77 11.74 3.44 2.39 2.60 3.40 6 IG18_SR2 SilentIntergenicRegion 0 3.34 1.86 3.44 2.26 2.73 2.62 2.77 2.49 1.22 3.19 1.28 13.27 3.40 9.82 3.91 2.93 2.86 4.81 4.06 3.04 2.13 2.12 3.74 7 IG18_AR2 ActiveIntergenicRegion 0 13.88 8.78 14.92 16.14 10.37 21.90 13.47 6.27 10.84 9.43 6.88 86.29 47.69 38.10 17.93 13.81 5.50 10.21 27.41 13.16 9.24 27.95 15.24 8 IG18_SR3 SilentIntergenicRegion 0 8.34 6.00 6.43 9.30 10.11 15.26 10.77 3.95 3.22 5.68 5.55 57.68 32.36 20.12 10.62 13.51 8.57 8.34 13.09 8.44 5.06 15.15 7.95 9 IG18_AR3 ActiveIntergenicRegion 0 11.16 6.67 15.61 21.41 15.25 12.54 6.79 5.50 4.20 4.63 1.10 11.72 2.32 13.51 7.56 5.50 3.29 12.56 25.87 7.88 7.22 10.39 7.11 10 ER1a ExonRegion 0 47.64 34.57 7.30 3.58 6.86 23.87 5.05 2.28 2.49 2.86 17.76 0.00 1.70 12.71 21.74 11.11 5.45 7.20 3.05 9.22 6.58 3.99 12.38 11 E1a_E2b KnownJunction 1 2712.78 3525.36 817.06 449.73 443.80 1015.04 391.86 130.70 110.73 167.00 698.02 23.56 13.15 702.16 1167.94 283.34 354.09 360.11 1772.66 581.14 214.18 198.46 390.62 12 ER1b ExonRegion 1 908.35 1178.35 335.50 182.72 166.82 360.06 128.61 56.32 49.23 75.97 322.19 8.21 10.84 250.23 423.28 129.95 141.48 166.81 613.24 221.20 95.52 84.20 166.78 13 ER2a ExonRegion 0 44.11 62.67 18.83 10.35 8.33 19.13 6.95 3.14 2.86 4.74 21.09 0.30 0.32 19.30 27.76 10.00 6.38 8.69 33.95 13.59 4.36 5.30 10.08 14 E2_Ab KnownBoundary 0 6.89 0.00 3.93 1.47 0.00 5.34 0.00 4.03 2.84 1.67 8.95 0.00 0.00 14.36 10.75 11.36 0.00 0.00 0.00 6.33 0.00 3.12 4.27 15 ER2b ExonRegion 1 620.67 1046.04 664.14 347.78 138.27 287.34 111.16 94.14 94.76 133.76 364.32 48.04 21.44 186.05 249.51 87.67 139.79 201.88 507.49 229.64 114.49 79.85 108.87 16 E2_Da KnownBoundary 0 13.85 3.35 13.87 5.23 4.33 8.29 0.00 11.54 4.28 2.87 77.81 18.91 0.00 16.66 35.23 20.34 26.09 6.59 9.04 11.19 7.91 0.00 0.00 17 E2a_E3a KnownJunction 1 239.75 454.00 959.90 404.14 105.43 86.54 39.13 123.02 132.03 184.08 565.56 91.23 56.00 95.59 168.00 54.60 259.75 76.77 161.13 232.28 199.42 64.23 28.08 18 ER2c ExonRegion 0 15.85 15.54 22.21 15.24 6.85 7.91 2.41 3.82 4.02 5.24 59.43 7.36 3.48 35.93 39.76 28.34 19.51 21.47 22.80 16.62 9.51 5.00 14.89 19 I2 Intron 0 20.51 16.59 4.66 3.11 6.82 17.77 9.45 1.31 0.00 2.61 18.73 8.83 3.94 30.26 45.17 33.35 6.73 6.12 24.37 10.85 4.50 6.38 11.98 20 I2_AR1 ActiveIntronRegion 0 20.93 16.91 4.75 3.16 6.96 18.13 9.65 1.34 0.00 2.66 19.09 8.97 4.02 30.84 46.09 34.03 6.87 6.24 24.87 11.07 4.59 6.51 12.23 21 I2 Intron 0 52.65 44.69 21.20 21.89 21.08 12.17 9.88 4.27 5.34 7.80 50.49 39.28 32.72 33.31 36.02 17.25 12.32 8.01 9.25 14.12 6.40 11.23 0.00 22 I2_AR1 ActiveIntronRegion 0 53.53 45.43 21.52 22.26 21.41 12.37 10.03 4.34 5.43 7.91 51.33 39.86 33.26 33.86 36.59 17.54 12.52 8.12 9.40 14.35 6.50 11.40 0.00 23 E3_Aa NovelBoundary 0 80.01 64.07 38.67 40.85 31.41 18.46 33.78 6.53 15.97 17.70 76.18 55.52 27.92 48.38 4.45 22.64 35.16 12.81 16.38 11.63 5.99 11.94 4.35 24 ER3a ExonRegion 0 316.14 464.53 1459.32 795.73 148.64 164.33 61.63 191.75 188.27 271.35 776.59 292.64 94.57 317.86 615.84 191.55 270.47 254.91 960.55 491.05 176.03 226.00 172.12 25 E3_Da KnownBoundary 0 495.64 532.41 2251.90 1399.46 216.89 254.80 125.73 314.91 258.24 389.23 709.60 456.75 103.08 829.19 1287.10 434.84 257.32 513.48 2581.72 817.37 122.01 499.79 469.75 26 E3a_E4a KnownJunction 0 0.00 0.00 0.00 5.53 0.00 0.00 0.00 1.89 1.59 4.51 2.47 11.70 0.00 17.07 4.94 0.00 0.00 0.00 7.34 3.20 5.44 5.88 4.35 27 ER3b ExonRegion 0 447.14 742.08 1767.23 1043.42 294.64 333.45 148.90 239.13 246.06 313.71 681.14 436.68 153.90 366.84 530.13 238.56 253.00 349.05 1084.22 410.58 174.52 236.55 179.52 28 ER4a ExonRegion 0 7.14 0.51 0.61 8.04 4.95 0.37 0.00 1.69 4.01 3.38 8.89 1.95 5.04 12.30 16.46 0.15 0.00 0.09 14.33 2.39 2.26 2.76 3.01 29 E4a_E5a KnownJunction 0 14.08 0.00 0.00 8.02 8.15 0.00 0.00 2.55 4.83 2.90 12.37 0.00 0.00 4.77 8.90 0.00 0.00 0.00 12.14 2.62 0.00 0.00 4.18 30 ER5a ExonRegion 0 8.37 9.00 2.69 9.32 14.26 7.15 4.88 4.48 6.28 3.45 9.62 6.41 1.80 7.02 5.29 3.12 1.04 3.00 13.13 5.57 1.86 1.76 2.06