Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NFXL1 Gene 0 27.50 154.54 35.39 56.51 36.62 61.64 39.40 27.28 39.92 68.17 64.35 117.81 86.23 58.74 39.14 43.04 48.90 76.95 30.73 83.60 24.24 34.61 30.57 2 464756 Transcript 0 0.01 1.26 0.59 0.02 0.52 0.01 0.51 0.02 0.02 3.06 1.16 0.74 0.91 1.29 0.01 1.92 1.09 2.15 1.27 1.70 0.79 0.04 2.47 3 329043 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 381538 Transcript 0 36.38 176.09 26.97 75.68 20.71 95.06 69.73 30.97 52.26 97.88 80.28 134.44 56.49 85.53 74.79 60.92 118.37 95.34 57.23 101.63 19.77 27.86 38.33 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.05 0.41 0.00 0.00 0.22 0.00 2.11 0.44 0.78 0.74 0.61 0.42 0.00 1.81 6 E1a_E2a KnownJunction 0 0.00 0.00 1.33 0.00 0.00 0.00 0.00 0.00 0.00 4.97 4.16 0.00 0.00 2.41 0.00 4.10 3.55 7.83 4.33 5.31 2.72 0.00 8.02 7 ER1b ExonRegion 0 0.00 2.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.44 3.87 0.00 0.00 1.62 0.00 5.94 3.30 3.70 4.25 5.67 4.41 0.69 5.87 8 ER1c ExonRegion 0 0.54 13.49 0.00 0.35 1.06 20.43 6.81 0.69 2.76 4.57 13.56 0.00 0.00 2.73 5.94 13.78 8.91 9.41 14.56 9.56 7.80 2.12 14.73 9 E1b_E2a KnownJunction 0 7.04 62.42 1.80 3.40 3.82 56.10 25.13 4.68 8.56 19.18 29.69 0.00 0.00 4.53 4.45 48.36 17.39 51.65 34.92 23.65 17.05 8.39 48.74 10 ER2a ExonRegion 0 3.88 45.46 5.51 5.78 2.39 15.57 7.21 3.84 8.98 22.31 25.45 3.45 8.85 22.31 8.51 22.94 20.57 35.46 18.02 33.89 14.66 8.74 18.12 11 E2a_E3a KnownJunction 0 10.45 116.62 7.84 22.34 7.64 5.34 18.15 6.90 12.38 19.56 30.48 31.06 45.61 24.43 4.45 26.57 16.64 54.01 18.92 59.76 19.83 20.45 25.87 12 ER3a ExonRegion 0 12.74 155.61 22.83 27.31 20.14 50.36 31.09 18.56 32.36 50.15 64.31 85.40 87.68 51.15 24.02 33.46 32.99 55.69 22.26 94.24 20.59 34.63 20.35 13 E3a_E4a KnownJunction 0 15.63 243.51 32.52 43.78 12.14 73.48 27.78 20.00 49.16 60.44 84.97 170.91 174.83 77.82 65.76 51.61 84.24 64.21 34.64 146.11 18.84 57.01 31.16 14 ER4a ExonRegion 0 18.22 218.48 26.04 35.55 26.51 35.44 40.21 17.13 44.95 61.93 56.76 189.91 131.96 59.12 32.26 50.07 56.00 60.98 26.35 115.07 22.96 42.22 31.34 15 E4a_E5a KnownJunction 0 23.26 213.58 25.84 40.62 33.96 29.30 36.17 8.46 44.56 50.63 58.91 173.76 89.93 75.93 29.92 46.40 59.00 60.02 52.80 95.04 27.06 54.56 18.44 16 E5_Aa NovelBoundary 0 12.15 0.00 6.56 4.13 0.00 0.00 4.33 0.00 1.79 3.33 0.00 0.00 6.82 0.00 0.00 0.00 0.00 0.00 4.80 0.00 0.00 0.00 0.00 17 ER5a ExonRegion 1 19.21 179.16 24.77 47.11 29.78 42.25 46.48 13.15 46.94 59.69 68.12 178.83 153.16 70.05 19.25 55.00 67.13 86.75 34.63 97.12 28.63 36.23 41.79 18 E5a_E6a KnownJunction 0 10.00 133.79 35.72 43.68 40.15 44.86 48.36 20.17 41.15 53.03 97.08 185.31 147.56 72.81 19.41 44.09 63.58 110.35 40.19 96.77 36.63 38.64 30.39 19 ER6a ExonRegion 1 16.21 153.17 23.27 34.04 23.08 43.95 41.00 19.71 44.13 57.52 92.89 149.11 78.50 67.21 18.25 51.22 69.41 112.30 36.84 88.60 33.41 31.50 35.52 20 E6a_E7a KnownJunction 0 33.12 158.92 19.13 38.32 43.55 75.13 43.46 35.32 53.30 63.05 106.76 104.58 104.21 95.65 34.37 51.35 69.94 127.72 19.39 100.54 50.47 26.21 34.49 21 ER7a ExonRegion 1 19.28 130.78 22.68 33.79 29.30 66.25 37.74 24.43 44.02 68.96 95.03 141.32 99.24 88.95 23.71 58.84 65.45 143.43 32.99 102.69 42.35 26.83 39.61 22 E7a_E8a KnownJunction 1 34.97 105.84 32.08 53.57 20.03 38.10 47.34 35.57 54.60 80.56 94.76 206.62 34.41 107.19 55.88 62.38 72.09 159.43 51.01 121.31 53.93 13.72 61.55 23 ER8a ExonRegion 0 20.91 102.85 24.71 41.98 23.63 52.27 34.63 29.79 49.26 66.40 115.19 126.07 55.63 98.09 41.88 69.57 77.20 150.95 38.41 124.86 64.45 22.22 45.65 24 E8a_E9a KnownJunction 1 26.97 115.57 28.30 45.98 30.98 48.38 53.44 33.23 48.12 77.44 78.07 105.18 72.72 89.06 25.71 76.82 67.41 178.29 38.21 161.90 43.86 20.08 44.05 25 ER9a ExonRegion 0 28.05 136.69 31.21 48.83 38.74 82.23 38.19 32.84 47.55 66.50 95.03 161.06 79.65 88.06 34.69 68.18 72.16 164.37 56.15 122.18 56.64 23.81 45.30 26 E9a_E10a KnownJunction 0 25.34 162.67 26.26 53.57 51.02 100.51 48.93 35.73 48.70 75.67 106.13 160.85 95.45 110.37 40.79 106.64 80.60 115.49 41.79 190.09 42.75 55.78 68.89 27 ER10a ExonRegion 0 19.35 132.85 30.32 46.63 27.12 65.97 41.58 29.00 46.96 76.95 106.26 114.02 82.99 86.12 44.91 66.05 72.46 160.41 42.56 131.25 43.62 27.94 45.67 28 E10a_E11a KnownJunction 0 26.82 120.77 25.52 48.55 24.53 82.17 32.55 16.80 44.30 77.44 100.71 129.04 84.41 93.06 38.20 64.60 52.83 145.34 72.57 123.23 47.20 28.78 41.15 29 ER11a ExonRegion 0 18.15 115.40 31.35 53.83 39.24 72.11 39.65 27.14 52.87 76.61 126.38 148.86 116.18 93.47 43.40 84.52 89.58 153.75 51.59 126.60 48.03 38.03 61.17 30 E11a_E12a KnownJunction 0 44.45 140.63 40.80 45.28 36.59 62.69 33.56 22.51 48.64 72.39 112.19 160.10 73.70 107.42 71.33 98.26 84.53 158.02 55.44 127.58 61.84 34.47 92.02 31 ER12a ExonRegion 0 23.51 121.79 40.45 40.93 20.70 51.77 30.03 25.05 45.16 83.82 104.72 160.86 84.99 87.45 49.67 76.95 78.93 147.09 48.48 119.50 49.91 27.89 72.32 32 E12_Da NovelBoundary 0 0.00 0.00 14.25 6.79 0.00 0.00 6.18 2.38 1.33 3.87 0.00 0.00 6.01 0.00 4.94 0.00 0.00 2.57 0.00 7.93 0.00 0.00 0.00 33 E12a_E13a KnownJunction 0 35.64 142.41 37.40 56.74 7.98 48.89 54.67 39.31 53.85 85.26 68.91 143.60 135.38 56.86 54.39 56.99 56.94 54.68 37.65 130.45 37.00 38.82 42.00 34 ER13a ExonRegion 0 29.40 142.05 38.78 63.09 26.27 60.71 33.76 26.41 39.79 79.63 83.32 148.99 97.29 79.53 44.62 68.85 66.21 176.01 56.15 124.78 45.80 38.23 44.97 35 E13a_E14a KnownJunction 0 25.19 167.73 36.84 60.37 38.79 63.09 25.00 29.16 39.03 88.51 77.39 103.38 74.83 79.40 42.15 86.47 64.42 212.57 41.70 142.28 31.57 27.74 53.27 36 ER14a ExonRegion 0 20.08 134.36 32.06 51.68 34.72 79.61 39.36 26.08 34.99 78.20 86.42 112.84 73.40 85.38 33.27 68.38 76.15 169.70 46.88 107.49 44.28 35.56 47.13 37 E14a_E15a KnownJunction 0 17.26 194.50 25.90 46.05 19.02 84.89 37.85 27.40 39.87 68.58 76.18 83.13 78.73 49.62 33.01 67.93 73.59 146.87 35.58 88.40 42.32 40.17 36.11 38 ER15a ExonRegion 0 28.78 155.94 27.96 46.16 38.39 84.22 34.88 30.45 34.49 70.04 90.91 81.65 78.20 75.31 25.17 52.92 72.37 129.70 40.89 80.80 43.04 29.87 38.02 39 E15a_E16a KnownJunction 0 10.59 155.04 20.02 36.69 74.02 53.38 25.04 18.77 25.03 61.11 62.54 42.76 69.80 52.62 39.43 49.65 68.91 97.62 3.86 67.75 35.21 17.39 20.40 40 E16a_E17a KnownJunction 0 49.34 167.86 28.21 46.85 8.66 39.92 34.49 26.37 30.61 65.68 68.18 109.09 53.57 75.81 27.44 75.45 62.74 105.66 49.32 93.13 26.63 37.23 69.40 41 ER16a ExonRegion 0 29.63 171.38 30.69 51.48 46.70 50.76 32.20 28.99 38.63 86.49 74.94 86.20 65.45 72.27 46.42 78.76 84.47 152.78 32.14 100.87 36.96 34.38 55.13 42 ER17a ExonRegion 0 32.80 181.61 46.45 59.76 45.62 80.88 52.13 40.20 46.19 78.89 94.03 105.72 58.41 84.29 51.96 61.93 90.18 132.58 43.38 98.11 40.89 34.59 50.46 43 E17a_E18a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.07 0.00 0.00 0.00 44 E17a_E19a KnownJunction 0 36.38 176.09 26.97 75.68 20.71 95.06 69.73 30.97 52.26 97.88 80.28 134.44 56.49 85.53 74.79 60.92 118.37 95.34 57.23 101.63 19.77 27.86 38.33 45 ER18a ExonRegion 0 2.63 7.19 0.28 1.68 2.37 0.00 2.96 0.00 0.73 1.93 0.00 0.42 1.60 1.08 0.99 0.60 1.37 0.77 1.32 1.70 0.00 2.68 0.00 46 E18_Da KnownBoundary 0 0.00 5.59 1.74 0.00 8.57 0.00 2.25 0.00 1.22 7.63 0.00 6.45 0.00 0.00 0.00 4.36 0.00 0.00 0.00 3.26 0.00 0.00 0.00 47 ER18b ExonRegion 0 0.04 5.03 1.03 0.07 2.07 0.03 2.04 0.06 0.07 5.21 0.07 2.96 3.62 2.54 0.05 1.46 0.35 0.00 0.00 0.90 0.00 0.15 0.05 48 E18b_E19a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 ER19a ExonRegion 0 32.14 206.89 34.77 52.40 47.41 81.35 47.62 36.01 48.15 82.25 82.83 83.63 68.08 74.07 53.68 49.32 78.96 59.52 39.33 96.00 29.57 39.84 38.60 50 E19a_E20a KnownJunction 0 52.38 237.26 34.59 75.25 88.29 91.71 55.07 44.28 47.60 83.89 84.71 59.87 66.07 69.52 49.08 35.38 72.74 45.76 45.74 112.75 30.09 47.15 24.67 51 E19a_E21a NovelJunction 0 0.00 11.71 1.51 7.46 7.81 24.64 4.33 0.00 6.63 5.32 2.11 0.00 12.66 0.00 0.00 3.59 0.00 6.59 3.67 3.13 0.00 2.45 0.00 52 ER20a ExonRegion 0 45.93 221.08 29.37 56.13 43.96 92.21 44.50 30.22 40.72 77.94 67.07 76.57 77.18 75.10 42.98 60.16 64.79 33.95 39.36 83.77 17.19 42.38 23.41 53 E20_Da NovelBoundary 0 0.00 36.44 4.52 5.19 3.57 0.00 2.12 1.56 1.77 2.98 0.00 0.00 27.11 0.00 0.00 4.19 17.86 2.03 3.86 11.25 6.30 0.00 0.00 54 E20a_E21a KnownJunction 0 28.89 206.08 32.02 58.07 46.60 72.34 49.24 16.35 32.55 64.31 62.65 57.32 88.63 62.22 42.40 37.43 37.96 41.58 31.53 75.74 10.81 10.41 18.95 55 E21_Aa NovelBoundary 0 3.48 9.34 0.00 5.39 3.40 2.10 16.43 1.93 7.93 5.10 7.11 0.00 19.80 0.00 0.00 0.00 3.93 8.12 0.00 2.88 0.00 4.90 0.00 56 ER21a ExonRegion 0 40.64 173.90 32.89 66.85 68.55 90.71 51.48 20.02 38.62 63.16 79.03 103.33 93.98 62.43 42.50 37.17 44.99 45.95 37.34 98.05 14.36 37.40 27.77 57 E21_Da NovelBoundary 0 0.00 25.59 1.42 14.18 8.40 17.32 11.66 1.93 5.01 6.63 11.69 18.16 32.95 4.83 0.00 7.95 9.07 6.14 8.47 17.90 0.00 20.08 3.41 58 E21a_E22a KnownJunction 0 60.53 201.28 45.86 68.39 42.53 89.55 55.56 22.92 48.84 76.40 75.55 111.79 78.89 72.87 47.10 51.10 45.72 54.01 32.47 83.60 20.08 40.66 23.65 59 I21 Intron 0 7.21 71.53 6.59 19.36 9.65 8.58 10.89 4.73 9.61 13.57 10.01 26.27 28.15 7.51 4.08 7.31 8.72 7.07 4.24 17.89 2.79 10.88 4.85 60 I21_SR1 SilentIntronRegion 0 3.00 47.57 3.31 13.77 6.12 6.07 9.91 4.06 8.84 12.66 8.99 27.78 28.81 8.16 1.10 4.22 7.81 3.92 5.52 18.45 2.60 12.96 4.63 61 I21_AR1 ActiveIntronRegion 0 4.08 31.91 5.28 16.70 8.94 10.13 11.99 4.63 11.71 12.30 12.66 25.21 25.38 9.05 3.60 12.21 13.99 12.40 3.27 20.23 3.96 12.60 6.79 62 I21_SR2 SilentIntronRegion 0 12.04 116.30 9.59 24.92 12.42 9.10 10.87 5.27 8.68 15.21 8.83 26.26 30.07 6.05 6.31 5.65 5.40 5.05 4.15 16.04 2.10 8.51 3.64 63 E22_Aa NovelBoundary 0 43.86 164.05 18.78 47.71 3.48 18.80 9.67 2.22 7.67 22.13 8.74 38.71 20.78 7.42 13.97 11.79 0.00 9.29 12.71 16.87 5.68 27.00 7.94 64 ER22a ExonRegion 0 62.91 308.40 57.85 85.13 63.70 81.80 61.53 34.05 51.21 81.73 89.29 140.14 137.41 73.85 61.13 56.68 61.92 86.61 45.84 101.44 24.01 48.11 43.44 65 E22_Da NovelBoundary 0 2.82 18.29 6.42 8.92 15.96 27.03 6.18 4.44 9.69 2.53 4.69 12.60 6.01 4.94 0.00 0.00 8.98 1.70 0.00 6.39 0.00 2.76 0.00 66 E22a_E23a KnownJunction 0 75.42 377.30 32.94 81.84 76.32 96.19 64.65 17.42 42.79 65.25 100.18 231.98 179.70 58.86 104.58 52.21 67.32 75.15 68.05 82.84 35.71 39.56 44.05 67 E23_Aa NovelBoundary 0 27.04 11.58 0.00 9.52 4.33 13.00 9.72 2.18 3.59 3.25 0.00 0.00 0.00 4.71 0.00 0.00 0.00 4.23 0.00 5.75 0.00 3.12 8.11 68 ER23a ExonRegion 0 40.37 286.55 45.36 96.39 53.22 124.90 73.70 20.39 46.66 68.41 76.56 189.37 127.24 61.24 68.93 64.89 74.03 63.88 32.27 110.48 33.87 46.53 36.71 69 E23a_E24a KnownJunction 0 56.45 231.14 62.74 112.81 54.16 128.96 97.64 24.64 53.38 85.66 59.49 180.06 151.29 63.22 59.83 54.69 32.82 42.32 32.66 131.41 31.63 51.07 30.99 70 ER24a ExonRegion 1 43.32 196.27 59.27 98.21 56.07 74.82 50.98 41.91 49.39 90.90 39.03 150.80 114.98 43.82 58.87 24.40 25.27 25.08 20.81 69.07 5.15 49.71 17.60 71 IG33 Intergenic 0 3.32 43.21 4.72 17.45 13.60 20.33 17.98 9.76 14.62 23.84 3.39 7.60 16.13 4.79 2.81 2.20 6.71 13.00 4.71 17.69 2.44 5.20 2.71 72 IG33_AR2 ActiveIntergenicRegion 0 0.72 22.26 1.88 6.26 5.50 15.06 13.14 7.93 6.93 16.38 0.00 13.51 42.78 1.77 1.69 0.00 2.26 1.90 1.09 7.28 0.00 4.99 1.01 73 IG33_SR1 SilentIntergenicRegion 0 4.30 51.20 5.81 21.69 16.68 22.39 19.86 10.48 17.56 26.73 4.67 5.44 6.32 5.94 3.23 3.02 8.40 17.19 6.08 21.65 3.36 5.30 3.36