Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ATP10D Gene 0 67.69 116.83 70.70 15.38 24.83 66.23 58.37 13.19 23.06 19.40 62.38 53.68 75.62 109.99 44.23 42.64 74.09 54.21 47.94 130.66 29.93 42.35 38.98 2 273859 Transcript 0 26.41 54.91 31.95 8.17 13.24 58.10 48.01 9.45 17.57 15.73 77.04 37.95 99.98 123.07 37.71 54.77 103.60 73.13 40.19 123.12 37.94 42.07 48.16 3 434825 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 ER1a ExonRegion 1 36.94 23.08 12.06 3.48 17.34 75.62 43.52 0.85 9.72 0.95 46.04 1.55 15.57 67.78 15.35 49.80 95.79 32.28 27.89 74.79 31.31 21.98 48.81 5 E1_Ab KnownBoundary 0 33.86 9.41 9.46 2.06 3.48 17.94 9.80 2.30 5.61 1.13 7.58 12.60 0.00 14.01 0.00 17.26 11.97 13.89 8.94 32.02 2.97 8.88 27.15 6 ER1b ExonRegion 1 8.52 4.18 19.06 2.68 0.57 14.28 16.39 5.53 18.27 5.83 77.01 17.01 16.04 82.33 21.97 32.76 117.16 42.15 22.83 112.29 46.58 21.38 28.92 7 E1_Da NovelBoundary 1 0.00 5.92 10.47 1.56 0.00 0.00 0.00 2.55 5.67 1.07 5.05 5.40 0.00 9.48 0.00 30.33 0.00 21.14 9.22 15.53 0.00 2.33 21.00 8 E1a_E2a KnownJunction 0 3.19 13.62 20.73 3.76 0.00 26.12 12.72 11.34 17.10 2.50 42.85 18.76 47.56 132.73 45.99 118.60 74.33 93.27 57.41 174.49 44.73 50.89 50.28 9 ER2a ExonRegion 0 14.19 23.59 17.89 1.52 6.45 49.75 37.20 3.23 17.95 10.88 62.66 35.59 54.43 119.71 22.88 42.31 81.50 73.53 42.48 116.73 38.34 34.11 44.06 10 E2a_E3a KnownJunction 1 9.33 9.54 8.78 1.96 4.07 17.21 20.58 0.00 19.39 15.18 62.12 60.02 125.80 107.54 8.90 16.58 65.26 29.72 25.32 101.82 25.33 43.48 22.62 11 E2a_E4a NovelJunction 0 0.00 6.25 2.78 0.00 0.00 0.00 18.28 2.55 0.00 0.00 7.90 6.30 0.00 19.25 4.45 4.36 17.20 12.93 0.00 30.42 0.00 2.76 0.00 12 ER3a ExonRegion 1 9.05 28.26 15.03 3.57 8.77 32.12 39.03 5.31 18.87 13.23 58.34 58.55 97.50 119.77 16.10 38.01 65.09 28.75 30.71 90.09 27.03 27.77 37.17 13 E3a_E4a KnownJunction 1 3.78 37.76 24.54 9.86 23.94 35.21 52.82 4.93 20.49 20.71 38.69 128.29 134.08 189.71 20.40 29.14 84.99 8.79 35.48 99.14 14.27 23.45 36.71 14 ER4a ExonRegion 1 12.45 34.96 24.99 6.00 10.98 42.74 42.55 8.01 16.13 16.91 68.86 96.52 165.02 151.43 20.01 44.41 92.59 48.83 50.83 119.76 38.30 42.68 47.59 15 E4a_E5a KnownJunction 1 12.82 45.32 43.49 1.40 16.13 49.23 39.92 5.71 17.85 16.09 77.81 125.29 239.11 146.04 8.90 32.98 94.34 51.53 19.39 107.25 27.18 61.97 66.58 16 ER5a ExonRegion 1 16.07 49.18 24.86 4.91 18.67 42.07 37.07 10.73 14.98 12.14 77.99 106.68 115.51 155.14 16.50 51.53 124.86 72.75 49.63 122.86 36.05 39.56 46.27 17 E5a_E6a KnownJunction 1 10.37 46.50 18.27 5.56 25.30 43.61 65.49 16.10 16.49 11.52 60.17 113.89 119.31 180.88 4.70 61.01 121.18 87.14 62.59 129.24 29.59 34.60 30.73 18 E6_Aa NovelBoundary 0 87.50 9.87 5.94 0.00 0.00 5.68 2.25 4.31 0.00 0.00 2.37 0.00 6.82 2.47 4.45 0.00 4.39 0.00 4.42 3.26 0.00 0.00 8.62 19 ER6a ExonRegion 1 24.29 51.58 26.67 3.43 7.28 47.61 31.07 8.29 16.80 10.74 59.72 89.83 92.31 126.45 14.21 51.44 84.37 63.32 34.53 98.23 25.35 38.87 33.13 20 E6a_E7a KnownJunction 1 16.52 53.21 15.17 4.93 12.82 18.46 25.39 8.75 16.17 9.08 40.01 66.47 100.81 111.01 9.39 47.77 100.33 53.47 21.37 96.83 14.70 34.05 32.10 21 ER7a ExonRegion 1 11.22 102.71 26.87 6.73 11.66 26.08 34.73 4.35 16.45 14.69 59.67 57.89 93.77 122.60 19.78 59.28 103.85 60.32 43.58 121.24 31.95 37.57 40.00 22 E7a_E8a KnownJunction 0 6.96 112.35 19.25 5.96 16.72 22.03 45.66 4.31 15.74 19.10 79.02 89.13 88.79 132.09 25.47 65.11 101.45 60.44 52.71 113.77 31.20 49.35 49.00 23 ER8a ExonRegion 1 22.64 93.62 25.26 5.19 10.77 45.50 52.96 4.71 18.98 16.04 66.58 105.06 125.93 134.10 20.99 62.14 72.93 55.74 58.46 145.68 24.33 49.39 44.97 24 E8a_E9a KnownJunction 0 33.64 158.66 11.59 4.96 20.46 41.23 62.18 9.00 9.95 13.62 67.91 115.24 155.35 128.14 31.89 31.19 43.48 39.96 70.68 126.68 16.37 44.82 30.82 25 ER9a ExonRegion 1 19.11 115.78 26.19 4.23 15.02 42.78 39.27 6.49 17.51 17.83 65.97 104.13 128.23 139.93 15.84 43.70 86.62 42.66 49.69 125.06 28.18 39.17 41.36 26 E9a_E10a KnownJunction 1 28.82 68.87 34.62 4.86 38.88 38.27 46.46 4.56 25.03 20.44 87.13 49.52 120.77 157.22 26.95 38.96 114.26 58.49 45.46 131.86 55.72 39.74 53.69 27 ER10a ExonRegion 1 22.97 60.13 45.52 5.46 20.94 60.68 55.27 9.16 18.02 21.04 73.04 82.53 104.26 172.93 29.41 71.36 107.41 98.04 59.36 152.11 51.44 56.57 60.75 28 E10_Da NovelBoundary 1 6.96 0.00 16.29 2.06 0.00 0.00 12.54 0.00 0.00 4.41 5.16 0.00 20.45 3.00 0.00 0.00 32.16 7.92 0.00 46.40 6.24 2.88 0.00 29 E10a_E11a KnownJunction 0 26.00 49.66 51.42 10.85 8.06 116.30 54.28 23.62 23.61 18.24 71.65 93.33 127.59 230.27 50.44 68.27 89.29 125.98 78.59 142.47 68.45 94.05 79.39 30 I10 Intron 0 3.67 9.99 7.97 1.42 0.68 3.21 6.57 0.98 2.06 1.65 4.65 6.43 14.49 5.45 1.25 2.48 6.56 4.53 4.40 37.15 1.69 2.64 3.06 31 I10_AR1 ActiveIntronRegion 0 6.01 19.82 11.71 1.54 0.51 3.24 7.10 1.78 1.16 1.29 4.91 9.19 17.22 6.31 2.43 3.75 8.75 4.10 6.43 38.96 1.72 3.90 2.36 32 I10_SR1 SilentIntronRegion 0 1.32 6.56 4.15 0.76 0.41 2.28 4.42 0.71 1.78 1.37 4.22 5.51 14.16 5.37 0.90 1.98 6.47 4.27 4.49 34.36 1.83 1.99 3.52 33 I10_AR2 ActiveIntronRegion 0 4.04 9.03 7.01 1.59 1.56 2.39 8.09 2.38 2.73 1.52 4.94 9.03 12.12 2.95 0.55 2.43 7.24 5.25 3.22 32.50 1.38 3.09 3.66 34 I10_SR2 SilentIntronRegion 0 6.18 10.40 11.64 2.12 1.19 3.12 10.75 0.98 2.39 1.56 5.81 5.47 11.04 7.37 1.26 4.33 8.93 7.89 4.61 44.44 2.16 4.09 1.67 35 I10_AR3 ActiveIntronRegion 0 8.15 12.79 16.63 3.13 1.20 6.32 10.81 0.35 3.57 2.95 5.30 6.50 15.31 5.35 1.80 2.12 3.71 3.99 2.81 44.53 1.12 2.52 2.71 36 I10_SR3 SilentIntronRegion 0 4.09 8.78 6.25 2.19 0.00 9.25 6.30 1.22 0.96 3.20 3.72 2.90 20.36 3.52 0.00 1.57 1.34 3.17 2.07 32.36 1.24 4.67 1.48 37 E11_Aa NovelBoundary 1 31.86 18.09 11.15 8.82 0.00 7.55 17.00 4.11 4.37 4.30 6.95 19.51 40.91 9.18 14.83 0.00 31.51 14.05 13.46 131.03 8.65 5.63 8.62 38 E11a_E12b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 ER11a ExonRegion 1 19.85 46.48 51.00 9.15 10.70 88.20 40.41 19.67 20.76 22.23 94.25 85.97 117.70 189.56 34.68 61.71 132.82 116.32 74.17 162.41 66.53 79.37 75.79 40 ER11b ExonRegion 0 26.12 70.88 45.69 9.12 14.76 68.94 67.05 16.90 22.33 22.37 107.85 61.80 128.81 157.73 40.27 72.16 139.54 96.62 46.21 165.77 49.96 67.94 59.54 41 E11_Db NovelBoundary 0 13.71 21.44 17.18 0.00 0.00 5.39 14.31 6.82 5.93 1.67 11.42 0.00 28.57 7.48 9.64 4.36 22.53 21.56 4.24 50.11 0.00 15.61 4.01 42 E11b_E12a KnownJunction 1 14.97 57.75 26.46 11.75 8.32 35.15 36.96 9.36 17.97 18.88 83.49 45.31 181.64 142.56 56.62 50.16 93.60 77.02 39.81 94.28 20.45 35.52 39.27 43 I11 Intron 0 7.81 29.19 11.41 3.07 2.41 3.25 9.16 1.35 3.96 1.49 5.62 7.62 26.14 6.24 3.14 3.37 6.24 2.70 2.59 26.83 0.90 5.87 2.13 44 I11_SR1 SilentIntronRegion 0 10.04 23.44 11.49 3.66 3.32 3.86 12.13 1.67 4.12 1.89 8.39 8.58 25.59 8.21 3.94 5.46 8.08 3.63 4.13 33.39 1.07 5.72 2.55 45 I11_AR1 ActiveIntronRegion 0 7.01 46.41 15.55 4.42 2.65 3.61 8.19 0.48 2.70 1.30 3.05 6.95 26.70 4.75 3.18 1.10 3.49 3.09 0.00 22.16 0.00 8.07 1.61 46 I11_SR2 SilentIntronRegion 1 3.68 70.73 13.75 3.85 3.72 1.83 2.76 0.00 6.71 1.80 1.85 6.40 47.92 4.31 3.15 0.00 0.00 0.00 0.00 25.53 0.00 7.43 0.00 47 I11_AR2 ActiveIntronRegion 1 4.03 29.14 10.57 1.74 0.78 1.54 5.40 1.44 4.64 0.72 1.27 6.86 32.21 2.75 2.34 0.83 2.31 0.26 0.45 17.53 0.62 5.48 1.23 48 I11_AR3 ActiveIntronRegion 0 5.14 28.21 5.07 0.00 0.00 3.18 2.30 0.89 3.19 1.19 4.02 4.95 10.53 5.37 0.00 1.03 10.28 2.55 3.32 16.98 2.29 3.61 3.06 49 E12_Aa NovelBoundary 0 2.82 34.40 22.65 4.69 0.00 2.90 13.20 0.00 2.89 1.18 7.37 0.00 33.60 11.01 0.00 4.27 0.00 9.66 3.95 43.66 9.27 5.69 3.24 50 ER12a ExonRegion 0 27.62 67.92 43.58 8.33 12.52 52.67 44.53 10.70 20.28 20.69 70.78 43.12 73.91 124.21 38.60 46.98 85.47 86.57 46.84 157.65 50.04 42.85 45.03 51 E12_Ab KnownBoundary 0 32.97 77.82 58.48 11.99 8.57 30.10 39.39 4.15 18.61 22.35 51.43 12.00 53.08 124.38 48.21 22.64 82.66 98.99 50.82 173.60 32.19 35.09 54.55 52 ER12b ExonRegion 0 25.61 50.03 46.69 11.39 14.94 57.39 45.26 8.78 21.58 21.36 60.18 18.15 47.85 134.98 35.40 41.41 84.96 94.09 64.32 188.65 40.65 34.70 44.16 53 E12a_E13a KnownJunction 1 19.71 25.72 71.26 10.39 11.80 32.77 19.08 3.24 17.45 10.48 25.32 13.95 73.05 126.97 22.37 11.88 78.82 51.07 35.11 144.64 28.79 34.66 24.16 54 ER13a ExonRegion 0 21.17 54.70 62.84 17.34 9.13 47.10 46.10 12.02 19.84 17.30 83.44 34.27 88.23 126.15 33.97 53.55 101.56 59.46 61.47 190.32 42.90 38.75 44.10 55 E13a_E14a KnownJunction 0 29.71 93.01 64.01 13.95 3.40 70.58 49.42 19.47 22.25 21.41 88.71 49.97 49.35 153.69 48.83 68.87 101.92 71.30 122.26 222.18 46.83 32.21 75.55 56 ER14a ExonRegion 0 42.95 102.16 65.97 17.70 20.56 83.23 69.99 12.41 26.96 22.47 93.30 57.89 94.54 146.98 37.03 57.66 127.23 78.07 79.11 209.41 47.96 54.45 50.13 57 E14a_E15a KnownJunction 0 48.97 107.09 69.25 25.64 19.69 87.39 58.69 13.60 30.67 23.50 109.19 72.47 114.60 144.27 44.01 68.36 104.35 74.62 53.18 304.82 46.46 45.31 32.27 58 ER15a ExonRegion 0 42.82 87.70 58.48 19.11 14.17 72.07 55.63 12.42 24.10 22.97 75.31 52.73 82.70 136.04 39.49 51.96 90.69 65.89 65.64 177.69 48.26 42.31 57.96 59 E15a_E16a KnownJunction 1 46.08 84.13 52.87 20.24 37.95 87.51 88.15 12.98 25.00 31.67 51.33 91.53 39.45 150.04 20.27 61.95 86.11 80.83 62.40 143.30 25.51 42.50 66.75 60 ER16a ExonRegion 0 41.83 101.13 45.32 14.96 17.21 65.98 55.80 12.56 23.00 22.35 59.17 57.68 46.81 125.88 39.15 46.70 82.22 75.01 49.28 141.07 43.24 32.22 64.54 61 E16a_E17a KnownJunction 0 34.45 91.37 58.72 3.60 24.87 48.04 53.08 3.82 26.65 19.34 50.38 55.52 28.24 129.67 46.23 67.42 55.63 91.53 84.43 167.02 20.26 30.31 54.80 62 E17_Aa NovelBoundary 0 6.74 12.30 1.80 1.37 3.82 0.00 3.44 0.00 1.53 0.00 9.42 0.00 32.95 14.54 0.00 4.36 16.55 0.00 9.51 31.70 2.59 5.76 0.00 63 ER17a ExonRegion 0 48.76 119.95 62.59 10.09 23.25 54.39 52.15 7.25 19.12 20.38 72.04 49.37 44.16 113.92 39.90 46.74 84.15 97.35 51.92 153.27 47.48 38.91 52.63 64 E17a_E18a KnownJunction 0 75.12 146.16 81.28 10.95 11.12 53.66 43.94 12.53 17.68 16.14 87.07 25.21 58.76 94.89 27.20 52.72 55.54 69.56 23.34 181.46 26.26 42.74 40.55 65 ER18a ExonRegion 0 69.51 186.90 83.02 11.85 21.07 66.44 59.99 15.67 24.07 23.36 91.34 35.53 82.30 145.37 52.52 65.01 87.63 87.45 75.56 221.12 39.72 49.72 46.61 66 E18a_E19a KnownJunction 0 88.83 385.98 123.68 22.74 28.69 78.08 104.84 10.88 36.40 18.51 96.97 76.22 67.37 121.31 31.03 84.93 56.47 104.75 102.69 226.14 40.53 61.11 63.25 67 ER19a ExonRegion 0 76.17 259.91 114.17 23.95 31.60 86.20 72.15 15.69 35.72 29.67 93.21 67.81 122.55 153.43 49.57 72.60 91.83 83.95 71.96 218.33 33.61 62.92 60.94 68 E19a_E20a KnownJunction 0 92.46 210.09 126.37 29.97 37.86 75.35 96.98 26.37 37.85 39.86 109.66 99.33 112.98 161.87 60.70 70.58 131.65 69.43 87.53 169.51 36.08 63.81 54.03 69 I19 Intron 0 2.24 8.59 3.26 1.53 2.07 6.28 10.29 2.00 4.02 2.05 7.40 9.20 25.03 11.23 2.00 4.39 8.52 4.18 2.47 21.48 1.40 5.77 2.82 70 I19_SR1 SilentIntronRegion 0 2.73 8.26 3.41 1.09 2.83 4.82 10.31 1.93 4.24 2.46 9.38 11.03 28.85 12.82 1.87 5.43 9.23 4.37 2.69 26.17 1.32 6.52 3.22 71 I19_AR1 ActiveIntronRegion 0 0.73 13.20 2.61 3.28 3.39 4.65 7.98 3.70 5.64 0.00 11.62 9.34 22.89 18.08 3.52 6.27 11.52 14.47 2.01 15.29 3.26 10.96 2.61 72 I19_AR2 ActiveIntronRegion 0 7.11 16.49 6.26 1.55 2.68 4.18 11.29 5.47 4.49 0.00 12.30 9.14 31.01 21.02 2.58 10.57 26.32 10.62 6.99 17.55 5.51 5.09 0.00 73 I19_SR2 SilentIntronRegion 0 1.72 8.17 3.06 1.78 1.13 8.06 10.50 1.75 3.60 1.92 4.73 7.32 21.14 8.52 1.96 2.90 6.83 2.65 2.13 17.52 1.12 4.47 2.55 74 E20_Aa NovelBoundary 0 34.30 17.43 6.80 3.46 0.00 20.22 4.15 0.00 3.79 1.29 5.37 0.00 20.29 7.53 0.00 3.33 12.72 2.03 4.05 31.19 0.00 5.69 0.00 75 ER20a ExonRegion 0 66.87 195.30 96.46 31.62 43.51 93.39 91.08 18.20 34.60 32.28 95.64 72.21 116.50 144.85 54.05 61.57 103.14 96.86 73.34 178.80 38.55 63.41 40.13 76 E20a_E21a KnownJunction 0 93.94 232.33 146.42 44.65 49.58 72.12 132.93 34.83 40.77 45.29 95.66 61.82 162.98 168.99 61.19 68.96 96.31 128.92 104.94 236.43 54.30 45.31 64.45 77 E21_Aa NovelBoundary 0 6.67 3.35 5.23 1.66 0.00 2.61 8.57 0.00 7.41 1.64 2.32 0.00 0.00 9.36 6.30 15.55 0.00 1.82 0.00 6.52 0.00 2.76 0.00 78 ER21a ExonRegion 0 59.81 214.30 113.05 27.40 30.20 82.21 69.64 22.04 37.58 29.38 82.47 51.58 113.99 143.70 63.86 79.20 102.83 67.19 105.88 170.13 39.14 56.16 59.04 79 E21a_E22a KnownJunction 0 75.87 193.65 86.31 23.64 55.18 88.02 40.98 17.42 28.39 19.02 83.23 22.06 82.95 120.90 61.81 39.65 79.10 41.87 55.25 135.31 21.99 35.64 49.34 80 I21 Intron 0 6.18 9.32 2.30 1.08 2.37 3.57 5.74 1.03 2.28 0.53 5.39 9.08 20.85 13.47 2.70 5.92 11.69 3.56 3.03 11.59 1.36 4.10 2.21 81 I21_AR2 ActiveIntronRegion 0 4.15 10.04 1.90 1.60 3.09 5.24 5.89 0.59 1.49 0.00 2.01 16.66 21.49 11.42 2.46 4.80 7.62 0.96 0.00 8.99 0.00 3.13 1.02 82 I21_SR3 SilentIntronRegion 0 7.24 10.54 3.03 1.07 2.36 3.95 5.79 1.45 2.27 0.72 6.34 8.11 24.09 14.18 3.05 6.71 13.27 3.79 3.60 11.86 1.48 4.92 3.11 83 E22_Aa NovelBoundary 0 20.08 18.42 6.92 1.23 0.00 0.00 21.20 5.09 7.81 0.00 4.84 0.00 13.64 20.37 0.00 12.56 26.09 2.11 3.67 33.75 5.81 3.00 0.00 84 ER22a ExonRegion 0 92.67 186.21 86.99 25.07 37.05 105.98 69.36 18.34 38.37 19.48 101.32 43.55 89.24 147.01 54.00 66.81 87.07 86.75 88.78 155.01 37.52 42.85 60.86 85 E22a_E23a KnownJunction 0 67.27 104.19 67.47 26.44 36.84 102.90 83.69 17.25 29.40 24.10 89.92 36.31 109.41 144.98 52.41 58.36 84.99 84.65 73.13 152.00 31.14 42.50 43.62 86 ER23a ExonRegion 0 127.20 163.42 111.84 23.55 39.42 79.54 72.65 18.41 25.06 20.55 43.10 46.00 53.68 68.26 64.16 24.45 41.06 24.05 35.97 98.75 12.50 41.58 21.20