Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	NUP54	Gene	0	127.13	199.54	114.33	193.48	184.28	163.95	125.37	121.12	102.30	153.91	214.33	280.24	169.55	177.16	142.96	156.95	177.29	72.68	71.42	124.44	75.80	169.36	83.02
2	420322	Transcript	0	32.04	18.05	12.17	13.35	25.22	15.08	15.45	10.57	7.51	10.88	17.22	19.40	24.32	8.45	10.26	13.64	19.75	4.63	11.01	9.25	1.84	9.01	5.83
3	342467	Transcript	0	2.89	2.50	3.02	2.03	16.30	22.54	17.22	9.41	16.70	10.88	29.69	0.00	0.00	7.06	14.09	18.71	13.09	11.36	4.33	3.26	15.07	5.20	0.00
4	458189	Transcript	0	1.65	0.00	0.14	0.00	0.00	2.65	0.00	0.19	0.14	0.00	0.86	0.00	1.04	0.36	0.00	0.00	1.47	0.00	0.00	1.18	0.73	0.93	0.65
5	264883	Transcript	0	0.00	4.07	0.00	1.36	2.68	0.00	0.00	0.00	0.00	0.00	1.93	4.33	0.00	3.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1a	ExonRegion	0	26.98	53.79	9.00	14.26	59.00	136.43	43.55	8.49	9.42	17.93	68.42	1.00	2.07	101.74	21.13	81.33	75.31	41.27	22.82	34.58	58.55	41.77	48.34
7	E1a_E2a	KnownJunction	0	10.74	8.62	17.06	9.92	3.99	21.01	11.75	4.27	3.67	19.37	14.27	0.00	26.78	4.71	4.45	40.76	34.13	29.02	4.71	10.99	16.43	14.33	7.94
8	I1	Intron	0	2.68	8.99	7.06	13.09	17.63	13.94	14.22	15.99	25.20	18.93	8.60	29.59	22.99	10.44	6.01	13.32	14.53	10.04	7.72	28.07	7.30	9.40	6.00
9	I1_AR1	ActiveIntronRegion	0	1.36	1.17	1.13	1.67	2.08	3.67	3.34	7.54	12.13	10.10	5.61	5.99	9.35	11.40	6.33	16.42	16.30	18.18	8.49	18.21	17.15	2.68	5.15
10	I1_SR1	SilentIntronRegion	0	12.36	3.25	3.48	5.23	1.39	8.88	9.37	9.20	24.70	25.46	21.03	17.49	26.26	34.76	21.82	38.16	30.10	40.21	37.08	27.49	28.38	6.83	29.37
11	I1_AR2	ActiveIntronRegion	0	3.82	2.19	3.79	3.63	8.19	6.81	9.77	8.96	11.60	15.54	14.29	10.50	15.56	22.10	12.66	26.07	19.16	28.98	19.55	24.15	20.50	4.48	19.80
12	I1_AR3	ActiveIntronRegion	0	3.16	10.49	3.32	7.20	7.65	9.10	18.61	18.10	28.49	20.09	10.88	17.08	23.10	14.25	3.31	23.59	21.29	19.17	11.52	38.57	14.98	5.02	9.75
13	I1_SR3	SilentIntronRegion	0	3.26	11.19	8.37	12.16	20.69	16.54	17.05	10.88	29.84	16.61	12.03	25.68	26.54	12.89	5.10	19.90	19.51	12.83	5.07	40.27	8.11	11.84	6.47
14	I1_AR4	ActiveIntronRegion	0	1.15	8.97	8.80	15.87	20.08	21.76	17.68	22.32	31.36	26.37	7.97	45.79	24.91	12.85	3.89	9.79	13.06	5.69	10.90	33.24	4.79	13.60	5.42
15	I1_SR4	SilentIntronRegion	0	1.79	9.36	9.39	16.53	28.25	17.59	18.15	22.56	32.14	22.91	12.57	41.81	26.85	10.98	6.83	10.84	16.31	8.26	5.82	35.05	4.10	11.38	5.82
16	I1_AR5	ActiveIntronRegion	0	3.34	10.02	10.37	18.43	21.92	16.14	14.99	20.23	32.74	22.94	8.33	38.63	28.88	8.53	7.77	10.57	14.33	6.25	7.67	25.36	3.55	12.68	5.44
17	E2_Aa	NovelBoundary	0	20.30	20.39	14.34	24.04	67.06	34.81	57.28	31.13	20.34	26.38	12.16	73.52	33.28	16.89	4.45	23.84	16.55	13.56	0.00	24.93	2.97	0.00	8.71
18	ER2a	ExonRegion	0	12.65	61.69	30.68	56.09	55.97	55.34	27.66	37.90	46.99	74.99	152.61	72.16	52.32	84.30	47.11	78.02	131.09	61.61	40.95	75.89	132.14	58.36	45.62
19	E2a_E3a	KnownJunction	1	21.26	74.26	56.38	99.09	59.34	25.04	35.73	69.00	79.92	117.41	319.19	75.62	32.79	169.29	72.93	81.60	237.03	81.95	85.08	132.12	203.43	63.25	42.25
20	E2a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.63	3.15	2.90	24.74	0.00	0.00	2.47	4.45	4.19	32.26	0.00	4.24	8.50	11.24	2.94	3.76
21	ER3a	ExonRegion	1	22.72	74.31	66.83	103.03	142.39	197.04	87.80	79.54	88.25	117.46	220.46	136.02	115.98	229.86	86.51	239.79	182.95	138.18	98.35	135.64	121.68	131.99	120.55
22	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E3a_E5a	KnownJunction	0	7.04	124.06	63.89	117.27	156.62	308.23	103.74	64.45	67.71	94.07	281.49	122.14	137.17	76.76	70.46	184.14	142.96	112.50	74.92	85.84	121.15	97.36	54.38
24	E3a_E6a	NovelJunction	0	0.00	0.00	1.39	6.06	7.98	13.57	2.25	0.00	8.13	0.00	0.00	19.51	6.82	7.65	11.50	7.78	3.74	1.95	0.00	5.37	5.68	0.00	3.93
25	E3a_E10a	NovelJunction	0	0.00	8.55	8.19	9.09	34.04	15.79	14.26	14.13	11.46	6.77	7.11	6.30	0.00	0.00	4.94	4.02	0.00	3.73	4.61	2.56	0.00	4.90	8.02
26	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER4a	ExonRegion	0	4.94	0.00	0.41	0.00	0.00	7.95	0.00	0.58	0.41	0.00	2.58	0.00	3.13	1.08	0.00	0.00	4.40	0.00	0.00	3.55	2.20	2.78	1.96
28	E5_Aa	NovelBoundary	0	3.33	18.15	12.95	7.89	0.00	8.69	22.26	11.67	13.37	4.19	2.05	6.00	13.47	14.48	0.00	15.38	26.55	24.79	3.58	23.78	11.31	6.25	3.67
29	ER5a	ExonRegion	0	54.83	142.96	63.38	108.95	105.12	137.57	105.91	81.82	89.17	116.27	232.35	181.95	184.92	217.04	101.08	175.45	187.96	99.88	76.34	137.43	133.18	119.72	76.81
30	E5a_E6a	KnownJunction	0	126.62	155.37	60.61	172.47	209.17	166.95	112.35	83.54	91.49	148.28	197.94	210.22	254.85	186.12	124.36	166.88	201.31	55.84	64.57	135.76	73.89	99.14	104.40
31	I5_AR1	ActiveIntronRegion	0	0.00	13.76	4.11	7.78	5.89	7.47	25.40	5.66	7.72	7.15	4.18	33.12	23.30	9.87	2.52	15.25	5.98	11.00	3.45	19.15	0.56	16.48	4.79
32	ER6a	ExonRegion	0	63.86	115.90	66.14	186.09	158.82	149.90	105.93	108.44	132.90	165.93	306.11	310.11	245.05	241.79	135.62	185.76	267.28	79.73	73.16	157.48	88.82	175.12	109.86
33	E6a_E7a	KnownJunction	0	53.79	133.13	69.75	229.08	159.68	147.87	83.42	80.83	134.37	177.85	315.24	304.00	199.50	147.39	92.47	185.42	222.72	99.99	93.46	169.44	92.97	173.41	154.00
34	I6_AR1	ActiveIntronRegion	0	4.82	13.20	7.65	6.96	16.32	3.52	12.62	3.95	6.34	1.97	13.30	19.08	16.61	8.39	6.26	9.12	6.33	17.57	11.98	18.68	3.33	3.20	3.38
35	E7_Aa	NovelBoundary	0	3.33	15.00	5.47	15.12	7.98	18.80	9.58	12.86	12.50	8.49	25.43	12.60	0.00	2.47	0.00	16.58	8.04	22.30	9.51	48.77	2.41	11.88	8.19
36	ER7a	ExonRegion	0	80.77	154.84	97.91	204.13	182.81	165.76	119.88	115.82	137.90	183.24	333.92	389.37	268.95	227.39	155.58	259.83	317.67	101.34	144.09	148.02	122.75	217.74	129.02
37	E7_Da	NovelBoundary	0	6.22	15.19	9.02	38.69	55.01	22.83	53.30	22.76	21.96	22.91	14.16	32.86	19.32	25.43	13.35	12.73	25.99	18.36	4.80	29.27	9.45	30.00	7.60
38	E7a_E8a	KnownJunction	0	104.61	198.58	87.58	215.09	202.21	166.44	87.13	95.46	98.03	145.54	284.44	362.97	177.10	224.26	155.63	302.23	256.57	124.03	228.81	91.79	101.50	218.91	177.90
39	E7a_E9a	NovelJunction	0	6.59	11.58	8.93	35.99	11.80	8.46	11.75	9.24	8.85	11.93	7.90	0.00	0.00	0.00	0.00	0.00	4.02	5.02	0.00	5.75	0.00	4.84	0.00
40	I7_AR2	ActiveIntronRegion	0	4.23	30.63	9.18	8.78	31.34	27.48	27.82	8.40	2.41	11.05	11.08	39.31	25.01	7.22	5.48	7.88	2.67	4.19	6.52	12.90	0.00	6.81	2.38
41	E8_Aa	NovelBoundary	0	22.30	21.18	16.41	27.84	73.60	24.99	68.85	24.07	18.69	29.04	13.74	36.16	61.03	19.54	9.52	20.51	22.35	5.18	15.72	15.08	2.35	29.51	15.54
42	ER8a	ExonRegion	0	98.63	157.36	75.88	146.37	176.94	175.11	106.52	92.80	76.94	124.89	285.68	355.33	219.58	210.63	132.56	246.85	260.71	95.71	169.52	124.45	82.66	171.53	140.26
43	E8a_E9a	KnownJunction	0	119.35	162.87	53.07	78.31	164.35	188.87	79.23	97.47	65.51	102.67	262.49	360.72	195.60	187.83	123.25	163.46	246.10	37.89	80.19	98.43	69.68	163.68	69.31
44	I8	Intron	0	21.10	31.71	10.50	23.36	26.67	18.52	28.43	10.86	9.65	14.86	14.58	47.23	27.86	17.94	12.83	13.30	13.92	5.42	8.55	16.59	1.97	19.44	7.88
45	I8_AR1	ActiveIntronRegion	0	19.59	21.94	11.01	23.29	35.04	20.92	28.36	13.54	9.35	18.28	17.44	44.43	24.10	22.16	12.01	15.71	16.46	3.44	8.04	18.62	2.25	22.77	9.09
46	I8_AR2	ActiveIntronRegion	0	14.68	30.72	3.05	10.63	16.05	18.56	20.21	3.73	4.66	4.63	9.51	32.58	35.30	18.55	11.64	7.70	14.03	2.77	5.32	10.69	1.83	19.68	4.33
47	I8_AR3	ActiveIntronRegion	0	25.19	39.90	13.41	29.09	25.14	16.86	32.36	12.00	12.09	16.77	14.74	56.16	27.88	14.80	14.16	14.04	12.04	8.11	10.41	17.80	1.85	17.03	8.58
48	E9_Aa	NovelBoundary	0	36.82	87.55	10.76	65.53	65.53	55.76	58.03	36.72	29.66	35.40	36.32	119.74	38.47	7.59	9.27	23.93	23.56	25.83	25.41	38.09	0.00	31.23	13.06
49	ER9a	ExonRegion	0	161.78	183.26	97.65	189.12	215.31	185.39	134.90	118.16	113.46	148.52	309.59	390.11	271.47	206.14	156.98	185.82	230.99	79.43	94.24	128.50	77.86	172.38	111.72
50	E9a_E10a	KnownJunction	0	173.22	140.30	119.75	239.06	281.24	233.73	162.74	89.54	112.90	136.30	282.12	337.91	268.81	182.35	153.16	161.33	141.84	84.52	136.47	124.96	26.13	188.48	87.50
51	E9a_E11a	KnownJunction	0	2.89	2.50	3.02	2.03	16.30	22.54	17.22	9.41	16.70	10.88	29.69	0.00	0.00	7.06	14.09	18.71	13.09	11.36	4.33	3.26	15.07	5.20	0.00
52	ER10a	ExonRegion	0	180.79	184.70	113.04	245.71	282.99	238.73	194.94	127.95	109.63	149.70	295.75	405.13	237.85	246.61	157.42	178.49	238.21	113.59	91.64	147.87	80.17	189.20	99.60
53	E10_Da	NovelBoundary	0	192.33	41.44	21.05	18.65	55.52	8.63	51.45	12.57	16.38	9.00	12.32	76.83	41.07	4.65	19.66	32.64	17.67	12.15	23.15	11.25	0.00	32.51	20.57
54	E10a_E11a	KnownJunction	1	198.04	256.34	122.94	230.11	253.14	229.92	174.31	129.47	124.51	135.60	231.22	570.79	243.49	242.98	194.70	161.67	208.23	86.93	87.16	135.63	82.97	171.58	89.12
55	ER11a	ExonRegion	0	212.32	285.55	131.79	260.17	225.01	215.06	199.63	147.49	133.19	173.81	304.67	387.49	219.22	256.10	218.15	229.57	279.28	132.90	95.93	184.72	126.99	212.62	116.44
56	E11_Da	KnownBoundary	0	40.90	47.75	16.94	20.71	64.09	32.08	25.70	19.92	21.82	13.19	12.85	0.00	18.67	15.01	18.42	16.92	30.76	7.67	11.29	31.64	0.00	18.25	8.37
57	E11a_E12a	KnownJunction	1	197.44	235.09	119.22	281.52	250.09	293.24	219.09	134.11	115.22	170.17	212.11	532.22	300.14	308.55	208.54	158.51	210.85	133.77	81.04	171.17	133.01	184.56	87.92
58	ER11b	ExonRegion	0	32.04	18.05	12.17	13.35	25.22	15.08	15.45	10.57	7.51	10.88	17.22	19.40	24.32	8.45	10.26	13.64	19.75	4.63	11.01	9.25	1.84	9.01	5.83
59	I11	Intron	0	36.64	16.98	10.35	16.35	23.94	14.22	24.09	7.68	5.49	11.72	12.68	18.08	19.45	7.75	6.01	12.41	8.86	2.19	9.50	7.61	1.31	9.94	6.13
60	I11_AR1	ActiveIntronRegion	0	37.07	17.18	10.47	16.55	24.18	14.39	24.37	7.76	5.55	11.85	12.83	18.29	19.68	7.84	6.08	12.56	8.97	2.22	9.61	7.69	1.33	10.06	6.20
61	ER12a	ExonRegion	0	217.52	238.06	186.62	336.29	382.25	288.67	245.46	167.50	136.30	211.13	354.75	480.30	254.74	301.60	252.28	234.58	314.83	125.70	118.32	197.78	115.76	228.92	143.84
62	E12a_E13a	KnownJunction	0	352.88	269.16	261.49	510.46	353.48	297.22	294.30	253.76	163.54	266.85	354.88	544.53	260.21	306.02	386.43	327.86	232.44	135.93	138.26	177.18	119.11	365.50	168.59
63	ER13a	ExonRegion	0	207.42	332.63	193.37	284.44	239.11	172.57	154.05	187.18	126.06	216.29	173.38	352.10	166.22	142.13	194.23	122.44	120.97	41.50	50.47	128.36	34.25	226.27	63.36
64	ER13b	ExonRegion	0	0.00	4.07	0.00	1.36	2.68	0.00	0.00	0.00	0.00	0.00	1.93	4.33	0.00	3.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00