Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PDGFRA Gene 0 119.05 348.51 4.10 18.97 23.28 19.20 9.87 21.16 19.18 6.93 0.02 0.41 0.00 0.12 0.00 0.05 0.40 111.46 0.51 16.27 862.72 2165.29 1684.44 2 257290 Transcript 0 37.27 166.32 1.40 8.87 9.71 11.27 5.20 11.61 15.22 4.67 0.01 0.13 0.00 0.11 0.00 0.00 0.61 133.76 0.30 15.09 1073.86 1779.60 1796.45 3 IG31_AR2 ActiveIntergenicRegion 0 2.56 7.56 0.00 0.00 0.00 2.92 0.70 0.00 0.98 0.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.88 0.00 1.13 42.80 158.59 235.51 4 ER1a ExonRegion 0 22.36 71.42 0.74 0.82 4.37 12.52 4.35 1.44 6.41 3.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 103.46 0.00 6.08 728.19 899.78 1327.22 5 E1a_E2a KnownJunction 0 7.41 18.29 0.00 0.00 0.00 8.69 0.00 3.90 9.32 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44.89 0.00 6.52 622.96 431.21 646.88 6 I1_AR3 ActiveIntronRegion 0 11.59 72.89 1.25 1.77 6.32 0.00 2.65 1.89 1.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.64 0.00 2.76 14.88 2.79 74.55 7 I1_AR4 ActiveIntronRegion 0 13.12 81.87 2.52 1.71 10.24 0.00 0.53 0.89 2.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.26 0.00 8.09 13.98 4.29 92.04 8 ER2a ExonRegion 0 3.37 14.14 1.77 0.00 0.00 3.28 0.00 5.53 9.90 0.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58.37 0.00 12.56 1131.98 1172.17 1209.56 9 E2a_E3a KnownJunction 0 6.22 18.29 3.67 0.00 0.00 0.00 0.00 3.70 9.00 1.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 95.38 0.00 24.67 1683.12 1763.34 1842.99 10 ER3a ExonRegion 0 13.83 60.29 1.71 1.53 5.58 12.77 5.42 3.61 10.25 3.78 0.31 0.00 0.00 0.00 0.00 0.00 0.00 136.77 0.00 13.22 1062.44 1405.40 1579.01 11 E3a_E4a KnownJunction 0 35.86 49.33 0.00 7.76 0.00 6.47 2.25 3.53 10.97 2.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 135.76 0.00 8.95 1259.15 1641.85 1699.92 12 ER4a ExonRegion 0 14.63 64.74 3.10 2.67 4.35 6.88 4.53 6.49 9.27 4.26 0.00 0.00 0.00 0.00 0.00 0.00 0.25 158.99 0.00 16.78 1127.07 1502.35 1735.60 13 E4a_E5a KnownJunction 0 7.11 67.55 2.87 2.06 3.99 5.11 11.04 9.12 11.66 3.63 0.00 0.00 0.00 0.00 0.00 0.00 4.39 131.32 0.00 11.12 1110.76 1493.18 1897.02 14 ER5a ExonRegion 0 20.45 97.77 0.23 5.97 7.48 7.56 6.80 6.57 10.54 2.50 0.00 0.00 0.00 0.00 0.00 0.00 2.49 115.34 0.00 19.81 1011.22 1514.88 1725.80 15 E5a_E6a KnownJunction 0 27.78 105.51 0.00 8.89 4.33 2.56 0.00 6.65 12.30 5.00 0.00 0.00 0.00 0.00 0.00 0.00 4.49 119.47 0.00 12.46 1104.76 2116.05 1992.55 16 ER6a ExonRegion 0 27.54 119.27 3.21 8.15 8.32 6.51 5.05 9.26 13.72 1.57 0.00 3.17 0.00 0.00 0.00 0.00 1.63 140.46 0.00 14.98 1210.35 1802.40 1862.94 17 E6a_E7a KnownJunction 0 36.90 158.33 5.12 10.42 7.47 5.51 23.80 10.51 18.23 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 182.10 0.00 11.89 1547.89 2704.38 2623.55 18 ER7a ExonRegion 0 23.34 142.08 1.11 5.72 12.79 11.59 4.08 8.92 17.48 1.14 0.00 1.91 0.00 0.00 0.00 0.00 0.00 135.35 0.15 16.89 934.41 1884.39 1821.48 19 E7a_E8a KnownJunction 0 34.75 151.22 3.61 6.73 8.40 7.55 4.02 4.89 21.41 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 111.92 3.76 16.55 737.93 1966.15 1928.10 20 ER8a ExonRegion 0 26.00 158.99 1.08 8.95 4.80 12.84 3.74 5.10 14.69 3.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 99.48 3.95 21.99 906.62 2214.58 1861.07 21 E8a_E9a KnownJunction 0 28.08 156.81 3.08 8.69 3.23 21.58 0.00 4.48 19.70 6.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 112.46 0.00 17.96 912.70 2105.76 1561.89 22 ER9a ExonRegion 0 16.93 112.17 3.99 10.07 8.07 12.13 2.54 3.96 15.75 6.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 114.14 1.28 18.75 1081.12 1584.36 1592.68 23 E9a_E10a KnownJunction 0 34.08 113.86 0.00 14.92 14.43 15.90 5.39 9.28 12.50 9.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 151.39 0.00 24.54 1477.41 2159.71 2280.30 24 ER10a ExonRegion 0 18.22 97.21 2.40 8.94 5.37 11.89 4.15 8.09 12.64 5.05 0.00 0.00 0.00 0.00 0.00 0.00 2.60 159.76 1.67 13.98 1295.24 1556.10 1706.52 25 E10a_E11a KnownJunction 0 27.49 61.37 1.30 5.03 0.00 12.32 2.03 14.83 11.20 3.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 139.74 0.00 8.88 1304.43 1598.01 1486.51 26 ER11a ExonRegion 0 20.47 113.30 0.98 8.81 4.03 11.50 2.08 13.50 13.40 3.15 0.00 0.00 0.00 0.00 0.00 0.00 0.73 137.16 0.00 12.83 1134.24 1365.41 1530.64 27 E11a_E12a KnownJunction 0 35.86 153.99 0.00 14.58 22.58 4.88 2.21 11.62 22.45 4.30 0.00 0.00 0.00 0.00 0.00 0.00 4.58 156.45 0.00 15.40 1191.99 1276.47 1908.72 28 ER12a ExonRegion 0 29.66 166.10 0.70 7.78 12.03 7.53 4.83 14.05 14.09 5.75 0.00 0.00 0.00 0.00 0.00 0.00 0.74 176.73 0.00 14.91 1214.56 1672.36 1882.85 29 E12a_E13a KnownJunction 0 51.05 166.81 0.00 14.02 16.30 5.62 8.08 5.71 11.60 5.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 131.53 0.00 24.29 1139.67 1502.30 1534.74 30 ER13a ExonRegion 0 24.93 137.61 0.00 7.58 5.56 22.15 4.41 14.34 15.35 6.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 111.80 0.00 16.82 1101.25 1601.77 1624.80 31 E13a_E14a KnownJunction 0 25.04 197.86 0.00 13.85 0.00 22.88 6.76 26.49 21.12 15.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 178.62 0.00 8.95 1140.29 2227.92 2245.82 32 ER14a ExonRegion 0 41.26 167.27 0.11 15.65 13.55 9.42 6.54 19.28 19.01 8.83 0.00 0.00 0.00 0.61 0.00 0.00 0.00 150.07 0.00 17.10 1218.45 2281.77 2355.74 33 E14a_E15a KnownJunction 0 36.97 143.00 1.21 17.75 8.49 7.50 3.89 13.51 25.49 6.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 132.03 0.00 13.93 1108.72 2121.01 1987.00 34 ER15a ExonRegion 0 45.33 208.60 1.07 14.67 14.49 12.66 5.08 10.74 19.38 4.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 130.90 1.05 20.52 1065.67 2215.67 2018.26 35 E15a_E16a KnownJunction 0 27.34 173.52 1.15 12.55 27.16 5.79 7.55 4.72 19.68 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 73.58 0.00 16.94 618.51 1622.87 1526.46 36 ER16a ExonRegion 0 41.48 319.59 2.29 10.41 21.15 14.36 4.58 9.43 21.06 4.75 0.00 0.00 0.00 0.41 0.00 0.00 0.00 77.19 0.97 19.23 599.67 2329.84 1651.45 37 E16a_E17a KnownJunction 0 34.23 352.83 0.00 3.16 0.00 23.91 8.44 10.23 27.14 2.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62.26 0.00 12.78 526.03 1720.11 1043.56 38 ER17a ExonRegion 0 45.92 287.79 1.61 10.09 14.95 13.64 6.99 17.24 18.18 8.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 122.02 0.00 19.90 826.16 2422.41 1767.45 39 E17a_E18a KnownJunction 0 64.53 275.48 0.00 10.89 16.98 5.34 10.20 29.08 20.72 3.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 169.79 0.00 10.74 1109.64 3587.00 2451.12 40 ER18a ExonRegion 0 45.29 258.94 0.00 9.89 18.80 15.16 6.70 14.94 16.63 8.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 169.90 0.00 19.08 1186.49 1984.71 1941.36 41 E18_Da NovelBoundary 0 7.33 25.92 0.00 1.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36.40 0.00 0.00 36.94 16.96 71.96 42 E18a_E19a KnownJunction 0 63.05 317.77 0.00 11.19 10.70 18.28 9.67 21.77 16.78 6.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 164.24 0.00 21.16 1184.40 1532.55 1621.64 43 ER19a ExonRegion 0 48.30 333.58 0.39 10.10 7.91 13.70 4.72 17.08 13.81 5.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 184.30 0.00 20.82 1144.06 1627.17 1884.49 44 E19a_E20a KnownJunction 0 74.38 376.51 1.83 11.15 19.78 9.60 2.08 12.90 16.38 8.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 185.38 0.00 12.14 1365.71 1774.42 2394.18 45 ER20a ExonRegion 0 39.35 163.54 0.49 9.54 8.00 12.18 4.47 13.45 11.18 4.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 146.67 0.00 10.36 1098.70 1445.61 1835.84 46 E20a_E21a KnownJunction 0 53.27 185.56 0.00 8.42 8.15 10.79 3.44 14.58 5.84 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 177.88 0.00 2.68 920.30 1209.36 1855.88 47 ER21a ExonRegion 0 41.65 129.07 1.76 5.18 5.25 10.80 6.47 16.63 10.74 4.76 0.00 0.00 0.00 1.04 0.00 0.00 0.00 174.96 0.00 13.01 1043.37 1414.75 1890.70 48 E21a_E22a KnownJunction 0 42.82 147.41 1.60 6.26 10.61 8.18 4.20 21.32 15.42 6.23 0.00 0.00 0.00 2.47 0.00 0.00 0.00 183.14 0.00 7.61 1132.50 2039.14 2180.17 49 ER22a ExonRegion 0 36.04 133.73 0.48 8.10 8.50 10.82 4.41 13.59 11.92 3.90 0.00 0.00 0.00 0.39 0.00 0.00 0.91 160.67 0.00 15.68 1162.04 1470.92 1849.33 50 E22a_E23a KnownJunction 0 62.97 175.50 1.45 8.99 20.54 19.65 1.77 13.35 15.45 4.43 0.00 0.00 0.00 0.00 0.00 0.00 4.39 131.28 0.00 17.39 1186.19 1460.05 1871.33 51 ER23a ExonRegion 0 213.82 560.48 6.85 31.10 38.27 27.37 15.22 32.89 24.94 9.58 0.00 0.55 0.00 0.13 0.00 0.10 0.31 83.92 0.62 16.42 655.14 2660.55 1605.15