Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 EXOC1 Gene 0 151.73 166.78 85.87 227.10 189.30 251.20 126.41 113.80 132.52 187.22 106.81 192.20 206.28 128.48 88.31 92.58 100.34 76.85 67.94 116.90 97.27 119.40 81.87 2 381295 Transcript 1 2.95 14.57 6.24 10.47 5.96 24.91 10.85 5.57 12.18 17.23 21.99 1.95 12.46 44.85 5.75 35.46 23.18 32.26 17.28 40.70 51.64 17.94 27.55 3 346134 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 349598 Transcript 1 127.50 6.58 23.86 19.05 62.05 13.86 20.71 29.37 26.53 25.52 178.05 419.24 268.33 154.28 73.31 142.18 48.71 15.38 3.76 3.26 140.67 180.39 111.31 5 ER1a ExonRegion 1 4.41 13.18 1.45 2.04 7.80 53.73 16.15 0.09 3.56 12.02 13.50 2.60 9.77 29.07 4.16 43.84 19.70 27.90 10.35 5.53 33.83 9.24 19.72 6 E1_Ab KnownBoundary 1 14.15 28.74 1.83 7.82 19.78 134.13 37.32 0.00 7.18 19.96 37.01 5.70 28.24 68.81 17.80 146.12 57.78 51.98 20.99 18.86 77.41 17.33 61.29 7 E1_Ac KnownBoundary 0 11.34 46.04 5.50 7.89 15.79 45.14 16.65 4.44 6.22 26.65 15.32 0.00 0.00 38.67 5.07 29.56 32.63 41.62 31.72 3.26 33.55 32.33 8.02 8 ER1b ExonRegion 1 12.49 37.21 4.90 5.91 18.28 80.56 26.21 2.71 8.81 33.41 22.74 0.87 8.13 65.02 8.80 84.80 48.96 59.44 21.87 12.62 50.69 28.20 28.58 9 ER1c ExonRegion 1 16.93 72.05 5.75 13.09 22.47 90.93 36.91 11.12 18.87 25.51 21.06 5.45 4.69 60.29 13.31 35.05 57.82 55.18 45.75 60.75 65.50 21.73 57.47 10 E1_Da KnownBoundary 0 15.78 31.44 6.89 18.35 19.61 77.40 25.97 8.13 19.44 15.28 12.42 6.15 0.00 27.14 4.45 37.26 63.39 57.41 22.78 80.15 86.18 25.47 43.45 11 E1a_E2a KnownJunction 0 3.63 30.46 1.24 9.86 7.39 33.05 19.12 11.09 10.27 11.12 4.74 17.71 6.82 0.00 0.00 0.00 4.39 13.10 14.97 8.37 17.36 0.00 12.04 12 ER1d ExonRegion 1 3.27 15.49 6.54 13.03 6.55 15.46 7.26 5.57 15.53 22.31 28.14 5.19 12.81 40.79 7.98 40.66 37.98 35.40 13.11 41.50 75.90 26.69 20.07 13 E1b_E2a KnownJunction 1 3.33 21.18 15.14 26.77 7.56 27.03 19.21 14.54 28.82 34.60 46.33 0.00 27.27 109.54 8.90 57.34 35.06 65.45 45.65 113.64 96.43 31.78 70.42 14 ER2a ExonRegion 1 14.07 32.17 17.47 50.71 48.56 110.94 40.38 31.27 54.93 76.90 80.50 106.78 94.57 127.26 26.74 74.79 67.03 83.60 47.83 102.48 137.45 75.15 70.44 15 E2a_E3a KnownJunction 1 25.34 56.31 31.90 62.73 90.83 182.00 69.87 53.31 92.91 82.22 115.56 220.42 194.95 149.27 15.95 90.57 103.13 86.18 87.44 141.51 203.12 114.51 98.51 16 ER3a ExonRegion 1 20.50 94.85 21.60 50.84 41.06 108.82 53.98 51.14 86.21 88.89 108.61 150.37 116.21 123.64 26.27 54.29 88.02 60.44 39.51 97.48 141.71 81.07 61.76 17 E3a_E4a KnownJunction 1 26.67 144.84 21.79 56.44 40.49 130.21 44.52 42.51 115.88 115.56 154.51 188.31 176.45 127.67 26.70 46.57 134.74 37.81 35.01 111.41 147.22 67.23 55.32 18 ER4a ExonRegion 1 22.81 99.79 25.22 56.20 79.82 122.15 71.46 39.87 83.90 96.65 120.77 226.43 188.54 140.98 32.35 85.45 131.77 58.46 52.30 100.23 88.23 107.59 73.49 19 E4a_E5a KnownJunction 1 21.26 8.62 9.88 15.72 24.02 31.63 61.43 13.51 12.44 52.78 93.23 217.42 225.15 116.90 16.32 76.65 129.97 28.23 48.47 38.54 53.93 77.15 72.30 20 I4_SR4 SilentIntronRegion 0 1.91 6.18 2.51 8.29 7.38 7.58 11.83 3.28 3.74 13.93 0.54 4.87 5.85 1.24 0.33 1.71 3.01 3.14 2.36 25.92 0.40 0.76 0.34 21 ER5a ExonRegion 1 44.33 104.20 29.15 80.55 93.99 151.63 95.54 40.73 97.46 102.51 131.16 187.20 202.79 143.16 41.33 102.68 127.01 77.36 59.59 102.94 125.27 101.03 97.22 22 E5a_E6a KnownJunction 1 45.12 126.29 40.15 110.54 55.69 154.91 53.83 51.96 128.24 149.94 125.14 135.94 168.98 157.22 47.72 109.89 103.60 99.32 66.45 108.28 171.37 91.36 86.47 23 ER6a ExonRegion 1 36.32 149.49 36.52 101.78 95.21 234.20 95.62 53.37 119.18 151.46 123.84 192.70 226.62 149.02 47.27 107.82 118.02 106.94 59.01 113.14 123.70 118.75 105.31 24 E6a_E7a KnownJunction 0 37.86 145.37 35.89 86.00 151.53 295.23 126.13 47.36 118.23 140.89 91.29 224.02 236.84 152.92 73.06 87.67 70.97 112.79 65.04 127.64 134.92 93.14 86.90 25 ER7a ExonRegion 0 29.01 127.72 41.53 107.66 94.11 187.61 79.92 52.49 97.25 137.84 102.56 175.65 205.66 162.99 59.16 101.16 124.52 142.43 65.72 140.33 153.73 105.68 104.68 26 E7a_E8a KnownJunction 1 56.75 127.74 45.86 125.19 71.90 209.54 54.28 53.52 80.44 107.90 69.44 141.35 141.87 177.06 45.37 71.18 70.69 123.90 42.64 155.45 172.98 73.54 70.94 27 E7a_E9a NovelJunction 0 3.78 0.00 0.00 3.83 3.40 2.90 2.25 2.38 0.00 1.45 0.00 14.40 0.00 4.94 0.00 4.36 0.00 4.77 0.00 0.00 0.00 0.00 0.00 28 ER8a ExonRegion 0 41.52 169.03 41.23 91.49 106.84 228.39 77.64 46.59 87.26 113.87 81.11 181.17 138.91 165.66 60.19 83.52 101.49 131.61 51.95 108.84 161.33 88.47 84.36 29 E8_Da NovelBoundary 0 0.00 3.35 0.00 7.72 27.67 42.82 17.40 0.00 6.57 2.58 19.69 24.91 45.45 34.08 0.00 17.77 9.07 26.57 0.00 23.46 24.09 9.06 24.07 30 E8a_E9a KnownJunction 0 57.27 177.67 42.93 129.15 83.19 311.41 101.75 33.52 97.25 116.37 84.13 122.89 167.03 100.59 31.89 68.96 91.91 130.99 39.62 127.71 140.85 98.10 85.11 31 I8 Intron 0 12.06 18.98 3.20 22.18 19.87 18.99 18.71 10.16 14.05 18.01 13.07 68.35 72.59 22.51 4.44 13.16 12.48 3.98 6.46 18.32 7.60 18.69 8.20 32 I8_SR1 SilentIntronRegion 0 2.18 6.90 1.62 6.89 5.40 6.68 10.22 3.42 7.97 4.29 8.66 53.58 63.65 17.76 2.68 9.22 9.26 3.13 3.29 16.21 5.74 14.45 5.63 33 I8_AR1 ActiveIntronRegion 1 3.10 4.88 1.10 11.97 10.36 15.55 16.37 3.49 11.01 9.71 13.45 115.82 98.89 29.37 2.50 15.13 17.95 6.97 5.82 24.09 14.44 17.88 10.26 34 I8_SR2 SilentIntronRegion 0 4.90 6.81 1.83 10.16 7.65 12.14 11.65 6.57 10.24 9.91 14.11 62.98 61.38 24.42 2.75 9.88 13.36 4.08 4.97 17.63 7.49 15.47 9.43 35 I8_AR2 ActiveIntronRegion 0 8.77 18.91 3.19 16.76 20.33 16.69 19.68 8.76 12.74 15.21 14.50 79.14 83.29 25.17 5.78 15.59 11.39 4.47 8.64 16.10 7.96 19.05 8.21 36 I8_SR3 SilentIntronRegion 0 17.10 22.26 2.94 31.43 26.06 22.23 23.91 15.20 20.76 21.57 17.43 76.06 77.10 21.32 4.62 14.87 20.20 0.48 7.76 23.82 5.18 25.62 5.63 37 I8_AR3 ActiveIntronRegion 0 18.73 35.76 4.26 35.01 34.98 37.98 26.87 18.17 19.62 34.65 13.48 58.73 73.83 21.10 4.46 12.44 12.21 3.66 7.72 19.84 9.07 20.39 9.52 38 I8_SR4 SilentIntronRegion 0 29.60 33.15 6.09 51.21 38.93 24.40 27.98 18.67 19.29 34.50 13.34 73.65 63.22 24.14 7.38 19.66 11.38 3.83 8.20 19.28 4.60 22.12 8.48 39 I8_AR4 ActiveIntronRegion 0 51.24 47.75 9.46 73.08 48.32 36.33 31.03 23.09 29.14 46.75 15.48 57.44 62.96 21.05 8.65 18.13 16.25 6.02 7.21 21.48 7.41 27.91 11.38 40 E9_Aa NovelBoundary 0 139.51 72.88 24.75 137.38 78.27 70.98 53.17 44.89 35.62 87.68 24.22 38.71 62.66 19.01 0.00 54.77 54.04 15.34 27.95 48.96 8.59 66.74 23.82 41 ER9a ExonRegion 0 104.51 185.63 63.92 172.92 144.10 258.69 120.66 79.83 136.29 150.30 110.64 199.30 293.53 149.94 70.29 90.85 105.98 104.92 58.76 132.14 126.29 133.14 96.79 42 E9a_E10a KnownJunction 0 134.10 299.03 72.08 226.01 225.38 300.79 150.68 119.11 185.07 219.73 145.88 232.58 295.60 152.04 64.78 93.74 121.65 79.92 50.54 149.18 97.48 172.56 71.28 43 ER10a ExonRegion 0 129.41 228.68 78.56 198.83 221.03 320.67 146.26 106.58 141.30 191.04 137.97 314.54 361.31 166.63 88.00 97.94 96.38 83.20 39.34 137.82 91.91 166.94 115.11 44 E10a_E11a KnownJunction 1 22.45 209.50 56.12 172.27 163.07 290.46 87.80 79.56 97.34 177.45 6.53 25.96 59.25 24.19 17.06 4.36 65.26 74.62 71.34 128.92 0.00 0.00 0.00 45 E10a_E12a KnownJunction 1 127.50 6.58 23.86 19.05 62.05 13.86 20.71 29.37 26.53 25.52 178.05 419.24 268.33 154.28 73.31 142.18 48.71 15.38 3.76 3.26 140.67 180.39 111.31 46 I10_SR2 SilentIntronRegion 0 11.01 30.63 8.26 29.65 29.69 20.20 22.23 10.51 20.34 18.78 2.41 9.08 21.85 8.02 3.13 12.31 20.38 14.48 12.43 20.78 5.82 3.27 4.42 47 ER11a ExonRegion 1 19.66 182.75 49.86 187.35 141.81 295.89 91.88 95.22 118.49 209.32 7.82 28.29 50.13 22.09 14.76 11.49 71.59 104.91 53.87 127.19 0.00 11.67 3.72 48 E11a_E12a KnownJunction 1 24.00 228.58 52.45 200.91 161.38 351.05 122.46 96.57 116.17 200.55 9.48 6.45 82.95 34.49 9.89 20.68 59.84 98.99 48.75 149.37 0.00 17.33 8.45 49 I11_SR1 SilentIntronRegion 0 11.04 42.65 3.90 42.85 12.64 16.59 20.14 11.06 15.55 23.24 3.42 20.49 33.54 7.46 2.89 4.69 9.71 3.19 2.01 11.52 0.00 12.01 1.78 50 I11_SR2 SilentIntronRegion 0 33.15 20.53 7.13 29.92 15.67 34.60 20.34 18.12 19.32 16.06 4.09 12.55 28.98 10.03 6.37 7.42 9.14 9.89 8.43 13.29 4.28 12.16 8.62 51 E12_Aa NovelBoundary 0 76.01 32.95 13.13 65.29 52.29 45.09 43.01 21.36 16.26 30.89 9.58 24.16 49.19 9.65 10.63 8.54 11.87 9.82 0.00 30.23 3.03 2.63 0.00 52 ER12a ExonRegion 0 176.01 206.10 109.08 282.18 240.20 308.64 149.45 124.72 174.87 251.51 158.70 322.41 373.06 197.50 97.90 137.62 141.07 144.42 111.80 172.63 148.56 165.46 118.40 53 E12a_E13a KnownJunction 0 182.03 220.22 128.59 309.65 373.68 399.26 150.06 175.02 191.46 320.41 156.41 356.82 393.48 186.06 132.77 152.61 193.08 188.41 131.49 156.47 207.63 148.43 170.73 54 ER13a ExonRegion 0 173.42 214.84 111.94 250.34 234.97 363.81 165.62 129.87 159.51 269.69 144.77 314.05 304.59 193.75 97.38 154.77 151.35 149.03 123.58 165.96 178.60 141.62 151.02 55 E13a_E14a KnownJunction 0 260.05 276.46 94.35 305.22 301.70 496.02 236.93 137.89 180.52 283.98 124.19 245.33 274.49 165.17 103.59 102.20 156.90 136.46 136.95 214.70 207.70 156.94 157.92 56 I13_SR1 SilentIntronRegion 0 23.33 20.33 4.61 32.77 28.67 19.19 23.92 13.07 26.98 20.93 11.53 30.81 43.89 17.84 9.41 20.07 12.79 12.27 4.66 13.09 6.44 16.04 23.16 57 E14_Aa NovelBoundary 0 54.23 60.06 6.42 50.11 29.46 36.85 51.54 18.52 36.72 38.31 14.85 39.16 90.58 31.43 22.25 11.19 13.46 11.40 9.60 28.32 15.07 22.84 15.79 58 ER14a ExonRegion 0 211.49 226.20 90.44 289.52 245.02 343.78 164.98 131.97 152.16 251.14 127.40 218.83 288.16 191.31 113.79 131.89 157.97 127.18 140.57 156.56 177.93 140.52 152.97 59 E14a_E15a KnownJunction 0 219.96 237.39 117.41 294.20 308.66 339.97 185.62 121.62 155.61 241.78 102.45 206.17 224.82 181.94 96.55 119.20 131.18 105.66 119.53 162.80 137.89 118.12 121.81 60 E14a_E16a NovelJunction 0 7.26 9.47 3.73 4.76 12.05 5.79 0.00 6.65 1.53 2.82 9.63 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 2.68 0.00 2.88 0.00 61 ER15a ExonRegion 0 208.98 246.21 105.96 302.36 265.24 332.75 164.58 124.21 163.40 240.23 124.10 213.18 225.65 149.79 107.12 106.75 137.86 79.98 87.95 132.20 98.95 136.87 101.27 62 E15a_E16a KnownJunction 0 303.39 290.61 122.88 334.69 301.27 398.41 232.52 111.27 153.56 251.24 126.56 286.29 176.61 137.09 102.23 85.36 81.07 41.45 68.43 109.23 75.68 127.12 82.38 63 I15_AR1 ActiveIntronRegion 0 19.69 18.94 6.52 49.03 30.15 29.79 22.46 13.88 25.74 24.50 7.68 26.73 29.87 10.31 7.18 9.87 10.63 9.54 9.15 15.20 7.08 17.41 8.27 64 E16_Aa NovelBoundary 0 79.87 64.66 25.81 87.07 41.00 39.98 44.16 23.54 35.91 29.06 16.06 82.98 43.50 7.42 0.00 11.02 8.04 8.21 8.38 27.10 10.87 11.02 7.34 65 ER16a ExonRegion 0 252.49 257.61 161.80 402.78 318.04 381.33 206.58 174.32 180.49 277.01 144.59 254.71 257.85 139.90 124.74 123.49 122.44 72.30 84.05 146.44 94.11 155.00 86.36 66 E16a_E17a KnownJunction 0 282.05 244.82 164.84 411.20 399.75 350.54 284.32 198.84 222.39 302.92 157.41 315.70 304.04 140.39 140.68 137.57 142.22 59.24 73.13 103.35 94.03 159.39 70.77 67 E16a_E18a NovelJunction 0 5.93 14.93 3.67 11.05 7.47 2.50 2.03 2.55 17.27 10.02 2.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.43 0.00 0.00 0.00 68 ER17a ExonRegion 0 368.72 283.04 135.73 406.66 371.57 421.91 232.59 192.35 188.97 272.81 136.85 268.15 263.25 158.11 131.59 122.79 132.51 62.09 100.85 120.86 79.15 156.73 87.39 69 E17a_E18a KnownJunction 0 696.20 499.25 111.76 360.83 299.24 459.05 211.41 196.38 178.04 271.76 132.30 246.98 292.03 186.83 195.07 106.55 99.58 60.98 136.57 89.93 74.38 152.78 105.17 70 I17_SR1 SilentIntronRegion 0 4.39 5.06 1.51 5.89 44.38 22.05 27.53 2.14 2.29 4.28 4.81 11.83 16.32 6.97 0.00 1.30 2.74 0.00 1.32 2.65 0.00 2.59 2.44 71 E18_Aa NovelBoundary 0 119.35 45.32 23.00 37.62 49.32 29.24 22.30 9.12 6.16 29.58 7.21 11.85 26.46 4.71 0.00 14.61 8.23 2.11 0.00 9.59 2.66 13.84 8.37 72 ER18a ExonRegion 0 379.30 306.64 151.42 458.80 459.84 504.04 264.93 211.16 195.57 303.55 143.91 255.22 311.13 147.99 162.80 129.04 108.05 82.81 98.80 138.56 90.93 172.05 104.36 73 E18a_E19a KnownJunction 0 483.12 292.25 212.44 673.94 528.18 520.72 252.79 265.58 254.83 341.23 156.51 277.14 483.73 161.11 275.79 167.14 111.73 94.26 144.95 200.96 99.40 194.91 114.64 74 ER19a ExonRegion 0 248.40 161.35 151.77 375.75 242.84 251.67 141.89 208.64 181.53 260.41 89.86 183.88 190.76 87.20 154.71 72.11 64.62 33.59 65.55 119.59 41.31 139.76 55.86 75 E19_Da KnownBoundary 0 3.48 18.94 6.45 11.82 7.72 2.50 3.71 6.12 3.79 5.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 0.00 2.43 2.41 4.78 0.00 76 ER19b ExonRegion 0 0.77 8.41 1.84 0.03 1.95 3.42 0.75 2.08 0.81 0.00 0.00 0.00 0.00 0.00 1.98 0.00 0.00 0.29 0.00 2.13 0.40 4.07 0.00