Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MYL5 Gene 0 20.09 3.61 20.15 22.25 11.97 21.93 6.54 24.84 33.51 11.60 25.05 8.10 9.09 30.39 42.23 25.69 34.64 14.52 17.94 8.86 99.27 26.69 27.87 2 400159 Transcript 0 25.78 4.10 21.50 27.41 15.79 24.69 6.62 28.43 37.82 13.11 27.17 6.88 8.94 31.40 45.83 27.15 35.10 14.99 20.20 10.68 99.19 27.75 26.09 3 IG9 Intergenic 0 9.39 1.12 9.45 5.42 5.41 8.97 3.05 8.29 12.75 7.61 8.94 4.54 3.20 11.24 12.79 8.44 11.05 6.39 6.54 5.27 37.07 20.26 27.58 4 IG9_AR1 ActiveIntergenicRegion 0 10.11 0.70 9.85 4.46 4.23 9.04 1.68 6.95 11.56 6.58 8.79 3.31 1.80 10.15 10.14 8.82 9.66 6.69 6.75 4.02 33.53 19.34 24.43 5 IG9_SR1 SilentIntergenicRegion 0 11.27 0.12 12.40 5.09 7.76 13.40 5.64 13.23 23.70 5.50 9.05 8.57 9.89 15.76 12.70 9.18 12.81 5.52 7.73 6.85 42.79 34.31 36.32 6 IG9_AR2 ActiveIntergenicRegion 0 11.96 1.92 12.35 9.82 10.33 13.73 5.47 15.60 20.98 13.20 14.31 8.17 6.21 16.01 22.17 8.48 19.19 5.43 11.48 6.68 51.89 29.78 33.46 7 IG9_SR2 SilentIntergenicRegion 0 8.81 2.15 9.17 4.52 6.40 8.73 3.20 9.05 11.61 9.40 10.50 5.26 2.58 11.40 12.98 6.87 9.61 7.21 5.56 6.50 42.84 19.88 28.12 8 IG9_AR3 ActiveIntergenicRegion 0 7.16 0.89 7.28 5.30 3.94 6.18 3.57 5.76 9.97 5.63 5.62 3.76 3.46 9.95 12.17 8.73 9.82 6.05 4.23 5.60 31.21 15.61 28.22 9 ER1a ExonRegion 0 10.39 0.21 6.18 1.64 6.32 21.04 8.15 6.27 6.55 4.55 5.60 10.46 2.74 7.28 12.81 7.02 9.78 5.27 4.28 6.13 29.30 15.82 12.51 10 E1_Da NovelBoundary 0 20.00 0.00 19.51 8.12 0.00 9.71 0.00 1.81 6.74 5.69 2.42 18.01 8.28 2.47 8.78 8.12 4.77 7.01 9.13 3.00 34.35 39.07 39.95 11 E1a_E2a KnownJunction 0 7.11 2.76 5.38 3.60 0.00 10.22 0.00 9.20 11.75 5.45 0.00 0.00 6.82 2.41 8.90 0.00 8.98 7.83 8.94 11.31 17.92 2.63 0.00 12 I1 Intron 0 11.11 0.70 7.08 4.17 3.36 6.90 2.87 9.70 7.35 4.88 3.31 1.22 4.53 7.66 9.58 7.47 7.53 5.77 4.00 2.91 23.38 18.07 30.17 13 I1_AR2 ActiveIntronRegion 0 11.77 0.74 7.50 4.42 3.56 7.31 3.04 10.27 7.79 5.17 3.50 1.29 4.80 8.11 10.15 7.91 7.98 6.11 4.23 3.09 24.76 19.14 31.96 14 E2_Aa NovelBoundary 0 13.56 0.00 1.83 10.35 0.00 13.91 10.25 8.17 2.58 3.68 0.00 6.60 6.17 2.35 4.45 17.09 16.55 7.25 0.00 3.26 15.32 16.29 33.89 15 ER2a ExonRegion 0 29.53 5.29 31.76 18.05 12.88 30.12 6.42 33.78 39.50 16.11 35.51 1.80 8.90 36.36 45.45 36.88 44.65 21.45 15.13 8.51 130.53 34.76 45.79 16 E2_Da NovelBoundary 0 6.52 0.00 10.23 2.63 0.00 0.00 0.00 0.00 2.92 2.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.75 0.00 14.27 18.52 17 E2a_E3a KnownJunction 0 58.23 11.38 36.84 34.63 39.05 58.21 6.01 53.97 56.77 16.31 32.22 12.60 0.00 33.55 55.01 52.21 38.34 23.59 13.46 14.83 95.88 33.92 46.18 18 I2 Intron 0 1.12 0.00 1.46 1.62 1.42 3.41 0.35 3.42 2.93 0.91 0.00 0.95 0.00 0.30 0.54 0.00 0.00 0.73 0.85 1.13 4.10 8.30 17.94 19 I2_SR1 SilentIntronRegion 0 1.14 0.00 1.48 1.64 1.44 3.46 0.36 3.48 2.98 0.92 0.00 0.96 0.00 0.31 0.55 0.00 0.00 0.74 0.86 1.15 4.16 8.43 18.23 20 E3_Aa NovelBoundary 0 9.33 0.00 10.82 1.73 0.00 0.00 5.56 2.01 4.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 11.24 5.82 31.93 21 ER3a ExonRegion 0 34.20 11.05 32.09 35.11 20.53 28.57 9.30 40.73 55.47 19.04 32.66 16.06 11.11 47.01 59.97 31.32 55.85 18.60 26.95 19.62 169.83 35.45 43.20 22 E3_Da NovelBoundary 0 7.19 0.00 2.87 5.53 8.15 0.00 2.25 9.00 13.08 4.38 2.68 0.00 0.00 9.65 17.80 7.86 8.98 6.34 0.00 3.26 2.72 10.59 23.47 23 E3a_E4a KnownJunction 0 30.89 6.51 37.91 43.52 22.67 10.90 8.61 38.49 60.50 17.70 24.59 0.00 0.00 47.03 44.50 31.53 16.92 21.35 35.01 11.31 108.48 32.45 36.11 24 I3 Intron 0 4.38 0.00 3.90 2.10 1.39 4.15 1.89 2.50 3.69 1.99 1.88 0.74 1.91 2.95 6.26 2.50 3.42 2.67 3.30 3.03 10.98 10.38 16.92 25 I3_AR1 ActiveIntronRegion 0 0.64 0.00 3.24 3.01 0.46 6.06 0.72 2.84 3.67 0.63 2.98 1.31 3.14 1.40 5.45 1.54 5.30 0.00 3.96 3.12 15.76 13.19 20.41 26 I3_SR1 SilentIntronRegion 0 5.76 0.00 3.33 2.39 1.21 6.52 2.56 2.29 3.04 2.03 1.61 0.00 0.00 1.59 2.97 3.16 4.53 0.82 1.52 3.15 11.42 12.20 23.56 27 I3_AR2 ActiveIntronRegion 0 5.34 0.00 7.13 2.09 2.28 2.90 1.20 2.58 6.23 3.88 1.56 0.94 4.57 3.73 9.46 3.70 2.91 4.13 4.00 4.64 10.00 10.81 12.69 28 I3_SR2 SilentIntronRegion 0 4.67 0.00 1.58 1.41 1.19 2.62 2.76 2.40 1.74 0.93 1.76 0.75 0.00 4.08 6.01 1.44 2.07 4.15 3.53 1.35 8.94 7.14 14.40 29 ER4a ExonRegion 0 21.73 2.27 32.71 37.94 17.58 25.66 6.62 43.69 60.56 21.27 36.65 13.28 18.67 50.92 69.85 51.49 41.50 28.23 25.09 13.50 149.03 45.56 42.54 30 E4_Da NovelBoundary 0 6.45 0.00 1.12 0.00 4.24 2.44 0.00 2.55 5.56 2.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 16.37 7.90 16.48 31 E4a_E5a KnownJunction 0 30.45 0.00 27.82 52.24 26.91 31.74 17.75 48.71 63.08 23.69 42.06 12.15 21.75 36.67 68.48 51.95 60.12 19.77 23.53 18.28 163.59 30.92 22.28 32 ER5a ExonRegion 0 16.91 4.30 26.63 38.13 17.92 19.31 11.36 39.47 43.40 10.28 34.57 13.10 10.75 43.77 60.93 39.09 62.68 18.36 42.38 13.01 121.23 31.31 33.12 33 E5_Da NovelBoundary 0 13.56 0.00 9.67 0.00 7.89 2.10 4.11 4.48 1.10 5.08 2.05 6.30 0.00 2.35 8.90 0.00 0.00 4.06 4.80 2.43 12.66 5.88 15.45 34 E5a_E6a KnownJunction 0 17.19 3.35 15.88 29.10 14.09 14.76 2.25 23.58 27.17 10.18 36.75 0.00 13.15 45.15 77.26 7.09 34.22 11.32 35.30 12.72 98.23 43.11 26.29 35 I5 Intron 0 4.71 0.82 3.14 2.06 1.62 2.41 1.34 0.52 3.17 1.21 1.76 0.72 0.78 4.07 8.57 5.41 3.67 1.67 0.64 0.65 13.60 8.22 8.32 36 I5_AR1 ActiveIntronRegion 0 4.80 0.84 3.19 2.10 1.66 2.47 1.37 0.51 3.21 1.24 1.80 0.74 0.80 4.16 8.76 5.53 3.76 1.71 0.66 0.66 13.87 8.39 8.51 37 ER6a ExonRegion 0 10.58 5.27 13.65 26.98 8.30 18.38 3.16 17.53 26.62 11.75 29.74 1.50 11.58 34.14 48.14 13.65 26.54 8.97 16.45 6.25 95.39 31.98 11.57 38 E6_Da NovelBoundary 0 6.15 2.50 0.00 4.06 0.00 0.00 0.00 2.42 7.12 2.77 7.63 0.00 8.12 2.35 14.34 11.88 0.00 0.00 0.00 0.00 17.17 10.84 16.22 39 E6a_E7a KnownJunction 0 51.49 0.00 8.40 23.67 14.52 39.69 4.33 10.93 26.50 11.34 31.06 6.30 6.82 14.19 25.71 25.63 40.86 6.80 9.22 3.07 69.31 18.00 10.76 40 ER7a ExonRegion 0 16.40 0.85 4.22 11.73 4.51 12.35 2.15 3.19 13.75 2.73 11.78 2.23 3.90 9.76 18.79 5.11 15.92 3.27 6.82 0.27 40.78 4.84 8.79